RNA–Protein interactions for RNA: YMR129W

POM152, Transcript of Glycoprotein subunit of transmembrane ring of nuclear pore complex, yeast

Gene POM152, Length 4,014 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
POM152	YMR129W	MNT2	P53059	558 aa		3.03	□□□□□ -1.92
POM152	YMR129W	GTF1	P53260	183 aa	Predicted RBP	3.03	□□□□□ -1.92
POM152	YMR129W	YLR287C	Q05881	355 aa		3.03	□□□□□ -1.92
POM152	YMR129W	UTP21	Q06078	939 aa	Predicted RBP	3.03	□□□□□ -1.92
POM152	YMR129W	RTP1	Q12751	981 aa		3.03	□□□□□ -1.92
POM152	YMR129W	ECM3	Q99252	613 aa		3.03	□□□□□ -1.92
POM152	YMR129W	EHT1	P38295	451 aa		3.03	□□□□□ -1.92
POM152	YMR129W	LEM3	P42838	414 aa		3.03	□□□□□ -1.92
POM152	YMR129W	YNR071C	P53757	342 aa		3.03	□□□□□ -1.92
POM152	YMR129W	VHS3	Q08438	674 aa		3.03	□□□□□ -1.92
POM152	YMR129W	PSF3	Q12146	194 aa		3.03	□□□□□ -1.92
POM152	YMR129W	YVC1	Q12324	675 aa		3.03	□□□□□ -1.92
POM152	YMR129W	NHA1	Q99271	985 aa		3.03	□□□□□ -1.92
POM152	YMR129W	CYB2	P00175	591 aa		3.03	□□□□□ -1.92
POM152	YMR129W	SAM35	P14693	329 aa		3.03	□□□□□ -1.92
POM152	YMR129W	ARG1	P22768	420 aa		3.03	□□□□□ -1.92
POM152	YMR129W	BEM4	P39011	633 aa		3.03	□□□□□ -1.92
POM152	YMR129W	ALT1	P52893	592 aa		3.03	□□□□□ -1.92
POM152	YMR129W	YNR061C	P53747	219 aa		3.03	□□□□□ -1.92
POM152	YMR129W	SQS1	P53866	767 aa	Known RBP	3.03	□□□□□ -1.92
POM152	YMR129W	TIM50	Q02776	476 aa		3.03	□□□□□ -1.92
POM152	YMR129W	RGC1	Q06108	1083 aa	Known RBP	3.03	□□□□□ -1.92
POM152	YMR129W	VPS5	Q92331	675 aa		3.03	□□□□□ -1.92
POM152	YMR129W	RPP1A	P05318	106 aa	Predicted RBP	3.03	□□□□□ -1.93
POM152	YMR129W	SDS22	P36047	338 aa		3.03	□□□□□ -1.93
POM152	YMR129W	PTC7	P38797	343 aa		3.03	□□□□□ -1.93
POM152	YMR129W	UME6	P39001	836 aa		3.03	□□□□□ -1.93
POM152	YMR129W	NPR2	P39923	615 aa		3.03	□□□□□ -1.93
POM152	YMR129W	LTP1	P40347	161 aa		3.03	□□□□□ -1.93
POM152	YMR129W	ARE2	P53629	642 aa	Known RBP	3.03	□□□□□ -1.93
POM152	YMR129W	GPD1	Q00055	391 aa	Known RBP	3.03	□□□□□ -1.93
POM152	YMR129W	ENT4	Q07872	247 aa		3.03	□□□□□ -1.93
POM152	YMR129W	YPL277C	Q08989	487 aa		3.03	□□□□□ -1.93
POM152	YMR129W	APM4	Q99186	491 aa		3.03	□□□□□ -1.93
POM152	YMR129W	URA3	P03962	267 aa		3.02	□□□□□ -1.93
POM152	YMR129W	RED1	P14291	827 aa		3.02	□□□□□ -1.93
POM152	YMR129W	PSD1	P39006	500 aa		3.02	□□□□□ -1.93
POM152	YMR129W	BUD8	P41698	603 aa		3.02	□□□□□ -1.93
POM152	YMR129W	PRY1	P47032	299 aa		3.02	□□□□□ -1.93
POM152	YMR129W	DSD1	P53095	428 aa		3.02	□□□□□ -1.93
POM152	YMR129W	NSE5	Q03718	556 aa		3.02	□□□□□ -1.93
POM152	YMR129W	CIR2	Q08822	631 aa		3.02	□□□□□ -1.93
POM152	YMR129W	RIB2	Q12362	591 aa	Known RBP	3.02	□□□□□ -1.93
POM152	YMR129W	SMC6	Q12749	1114 aa		3.02	□□□□□ -1.93
POM152	YMR129W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
POM152	YMR129W	EFT1	P32324	842 aa	Known RBP	3.02	□□□□□ -1.93
POM152	YMR129W	SET2	P46995	733 aa	Known RBP	3.02	□□□□□ -1.93
POM152	YMR129W	YJR039W	P47107	1121 aa		3.02	□□□□□ -1.93
POM152	YMR129W	EXG2	P52911	562 aa		3.02	□□□□□ -1.93
POM152	YMR129W	YGR250C	P53316	781 aa	Known RBP	3.02	□□□□□ -1.93
POM152	YMR129W	PAP2	P53632	584 aa	Known RBP	3.02	□□□□□ -1.93
POM152	YMR129W	NGL3	Q03210	505 aa		3.02	□□□□□ -1.93
POM152	YMR129W	SPC19	Q03954	165 aa		3.02	□□□□□ -1.93
POM152	YMR129W	SXM1	Q04175	944 aa	Known RBP	3.02	□□□□□ -1.93
POM152	YMR129W	TAF11	Q04226	346 aa		3.02	□□□□□ -1.93
POM152	YMR129W	OPY2	Q06810	360 aa		3.02	□□□□□ -1.93
POM152	YMR129W	CHS2	P14180	963 aa		3.02	□□□□□ -1.93
POM152	YMR129W	UBC1	P21734	215 aa	Known RBP	3.02	□□□□□ -1.93
POM152	YMR129W	RAD16	P31244	790 aa		3.02	□□□□□ -1.93
POM152	YMR129W	CNS1	P33313	385 aa		3.02	□□□□□ -1.93
POM152	YMR129W	YKR078W	P36158	585 aa	Known RBP	3.02	□□□□□ -1.93
POM152	YMR129W	SRO77	P38163	1010 aa		3.02	□□□□□ -1.93
POM152	YMR129W	ZRG8	P40021	1076 aa		3.02	□□□□□ -1.93
POM152	YMR129W	DOT5	P40553	215 aa		3.02	□□□□□ -1.93
POM152	YMR129W	RPT6	Q01939	405 aa	Known RBP	3.02	□□□□□ -1.93
POM152	YMR129W	YDR444W	Q04093	687 aa		3.02	□□□□□ -1.93
POM152	YMR129W	KCS1	Q12494	1050 aa		3.02	□□□□□ -1.93
POM152	YMR129W	RPN3	P40016	523 aa	Known RBP	3.01	□□□□□ -1.93
POM152	YMR129W	KAP123	P40069	1113 aa	Known RBP	3.01	□□□□□ -1.93
POM152	YMR129W	CTH1	P47976	325 aa		3.01	□□□□□ -1.93
POM152	YMR129W	PRP4	P20053	465 aa	Known RBP	3.01	□□□□□ -1.93
POM152	YMR129W	ARP2	P32381	391 aa	Known RBP	3.01	□□□□□ -1.93
POM152	YMR129W	APN2	P38207	520 aa		3.01	□□□□□ -1.93
POM152	YMR129W	TOS1	P38288	455 aa		3.01	□□□□□ -1.93
POM152	YMR129W	YEL025C	P39991	1188 aa		3.01	□□□□□ -1.93
POM152	YMR129W	PFA3	P42836	336 aa		3.01	□□□□□ -1.93
POM152	YMR129W	TAM41	P53230	385 aa		3.01	□□□□□ -1.93
POM152	YMR129W	SSL2	Q00578	843 aa		3.01	□□□□□ -1.93
POM152	YMR129W	PYC1	P11154	1178 aa	Known RBP	3.01	□□□□□ -1.93
POM152	YMR129W	MRP7	P12687	371 aa		3.01	□□□□□ -1.93
POM152	YMR129W	IME1	P21190	360 aa		3.01	□□□□□ -1.93
POM152	YMR129W	CDC60	P26637	1090 aa	Known RBP	3.01	□□□□□ -1.93
POM152	YMR129W	MET22	P32179	357 aa		3.01	□□□□□ -1.93
POM152	YMR129W	YBR225W	P38321	900 aa		3.01	□□□□□ -1.93
POM152	YMR129W	RAD26	P40352	1085 aa		3.01	□□□□□ -1.93
POM152	YMR129W	SRB7	P47822	140 aa		3.01	□□□□□ -1.93
POM152	YMR129W	SAP4	P53036	818 aa		3.01	□□□□□ -1.93
POM152	YMR129W	YGR012W	P53206	393 aa		3.01	□□□□□ -1.93
POM152	YMR129W	RPS9B	P05755	195 aa	Known RBP	3	□□□□□ -1.93
POM152	YMR129W	SGF29	P25554	259 aa		3	□□□□□ -1.93
POM152	YMR129W	PXA2	P34230	853 aa		3	□□□□□ -1.93
POM152	YMR129W	ESL2	P36168	1195 aa		3	□□□□□ -1.93
POM152	YMR129W	PIK1	P39104	1066 aa		3	□□□□□ -1.93
POM152	YMR129W	ZAP1	P47043	880 aa		3	□□□□□ -1.93
POM152	YMR129W	DUO1	P53168	247 aa	Known RBP	3	□□□□□ -1.93
POM152	YMR129W	CSR1	Q06705	408 aa	Known RBP	3	□□□□□ -1.93
POM152	YMR129W	ARG3	P05150	338 aa		3	□□□□□ -1.93
POM152	YMR129W	TPK1	P06244	397 aa		3	□□□□□ -1.93
POM152	YMR129W	SPS1	P08458	490 aa		3	□□□□□ -1.93
POM152	YMR129W	MTF2	P10849	440 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms