RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C EUG1P32474 517 aa6.4□□□□□ -1.38
PEX12YMR026C CBR1P38626 284 aaKnown RBP6.4□□□□□ -1.38
PEX12YMR026C PIG2P40187 538 aa6.4□□□□□ -1.38
PEX12YMR026C VBA4Q04602 768 aaKnown RBP6.4□□□□□ -1.38
PEX12YMR026C PRP28P23394 588 aa6.39□□□□□ -1.39
PEX12YMR026C STP4Q07351 490 aa6.39□□□□□ -1.39
PEX12YMR026C TMA17Q12513 150 aa6.39□□□□□ -1.39
PEX12YMR026C GLN4P13188 809 aaKnown RBP6.38□□□□□ -1.39
PEX12YMR026C KIN82P25341 720 aa6.38□□□□□ -1.39
PEX12YMR026C FEN2P25621 512 aaKnown RBP6.38□□□□□ -1.39
PEX12YMR026C DAL3P32459 195 aa6.38□□□□□ -1.39
PEX12YMR026C DUN1P39009 513 aa6.38□□□□□ -1.39
PEX12YMR026C GPP2P40106 250 aaKnown RBP6.38□□□□□ -1.39
PEX12YMR026C SDS3P40505 327 aa6.38□□□□□ -1.39
PEX12YMR026C PXA1P41909 870 aa6.38□□□□□ -1.39
PEX12YMR026C IES1P43579 692 aa6.38□□□□□ -1.39
PEX12YMR026C GND2P53319 492 aa6.38□□□□□ -1.39
PEX12YMR026C SMX3P54999 86 aaPredicted RBP6.38□□□□□ -1.39
PEX12YMR026C SEC15P22224 910 aa6.37□□□□□ -1.39
PEX12YMR026C YIL077CP40508 320 aa6.37□□□□□ -1.39
PEX12YMR026C BUD8P41698 603 aa6.37□□□□□ -1.39
PEX12YMR026C CHS5Q12114 671 aaKnown RBP6.37□□□□□ -1.39
PEX12YMR026C THR1P17423 357 aaKnown RBP6.36□□□□□ -1.39
PEX12YMR026C PRP22P24384 1145 aaKnown RBP6.36□□□□□ -1.39
PEX12YMR026C MTH1P35198 433 aa6.36□□□□□ -1.39
PEX12YMR026C YBR071WP38243 211 aa6.36□□□□□ -1.39
PEX12YMR026C NDC80P40460 691 aa6.36□□□□□ -1.39
PEX12YMR026C VID28P40547 921 aa6.36□□□□□ -1.39
PEX12YMR026C ATG4P53867 494 aa6.36□□□□□ -1.39
PEX12YMR026C YFT2Q06676 274 aa6.36□□□□□ -1.39
PEX12YMR026C TRE2Q08693 809 aa6.36□□□□□ -1.39
PEX12YMR026C RMP1Q12530 201 aa6.36□□□□□ -1.39
PEX12YMR026C RPS9BP05755 195 aaKnown RBP6.35□□□□□ -1.39
PEX12YMR026C SSB1P11484 613 aaKnown RBP6.35□□□□□ -1.39
PEX12YMR026C COS111P38308 924 aa6.35□□□□□ -1.39
PEX12YMR026C PAF1P38351 445 aa6.35□□□□□ -1.39
PEX12YMR026C SSB2P40150 613 aaKnown RBP6.35□□□□□ -1.39
PEX12YMR026C YJR120WP47157 116 aa6.35□□□□□ -1.39
PEX12YMR026C RFX1P48743 811 aa6.35□□□□□ -1.39
PEX12YMR026C SKY1Q03656 742 aa6.35□□□□□ -1.39
PEX12YMR026C PPN1Q04119 674 aa6.35□□□□□ -1.39
PEX12YMR026C IRC10Q08118 586 aa6.35□□□□□ -1.39
PEX12YMR026C CDC26P14724 124 aa6.34□□□□□ -1.39
PEX12YMR026C AEP2P22136 580 aa6.34□□□□□ -1.39
PEX12YMR026C ARG2P40360 574 aa6.34□□□□□ -1.39
PEX12YMR026C NIT2P47016 307 aa6.34□□□□□ -1.39
PEX12YMR026C TAF4P50105 388 aa6.34□□□□□ -1.39
PEX12YMR026C MRH1Q12117 320 aaPredicted RBP6.34□□□□□ -1.39
PEX12YMR026C USV1Q12132 391 aa6.34□□□□□ -1.39
PEX12YMR026C SER1P33330 395 aaKnown RBP6.33□□□□□ -1.4
PEX12YMR026C UBS1P38290 277 aa6.33□□□□□ -1.4
PEX12YMR026C MPS3P47069 682 aa6.33□□□□□ -1.4
PEX12YMR026C CTR1P49573 406 aa6.33□□□□□ -1.4
PEX12YMR026C RNR4P49723 345 aaKnown RBP6.33□□□□□ -1.4
PEX12YMR026C NSE5Q03718 556 aa6.33□□□□□ -1.4
PEX12YMR026C YPR027CQ12079 277 aa6.33□□□□□ -1.4
PEX12YMR026C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
PEX12YMR026C MRC1P25588 1096 aa6.32□□□□□ -1.4
PEX12YMR026C PRE4P30657 266 aa6.32□□□□□ -1.4
PEX12YMR026C MF(ALPHA)2P32435 120 aa6.32□□□□□ -1.4
PEX12YMR026C STU2P46675 888 aa6.32□□□□□ -1.4
PEX12YMR026C SPO1P53541 631 aa6.32□□□□□ -1.4
PEX12YMR026C COG6P53959 839 aa6.32□□□□□ -1.4
PEX12YMR026C ABF1P14164 731 aa6.31□□□□□ -1.4
PEX12YMR026C CDC43P18898 376 aa6.31□□□□□ -1.4
PEX12YMR026C ACO1P19414 778 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
PEX12YMR026C ATP12P22135 325 aa6.31□□□□□ -1.4
PEX12YMR026C KIN3P22209 435 aa6.31□□□□□ -1.4
PEX12YMR026C DGR2P32330 852 aa6.31□□□□□ -1.4
PEX12YMR026C MSS1P32559 526 aaPredicted RBP6.31□□□□□ -1.4
PEX12YMR026C SET3P36124 751 aa6.31□□□□□ -1.4
PEX12YMR026C GLG1P36143 616 aa6.31□□□□□ -1.4
PEX12YMR026C CTP1P38152 299 aa6.31□□□□□ -1.4
PEX12YMR026C YJL206CP39529 758 aa6.31□□□□□ -1.4
PEX12YMR026C KHA1P40309 873 aa6.31□□□□□ -1.4
PEX12YMR026C YGR151CP53287 111 aa6.31□□□□□ -1.4
PEX12YMR026C NTH1P32356 751 aa6.3□□□□□ -1.4
PEX12YMR026C CCT7P42943 550 aaKnown RBP6.3□□□□□ -1.4
PEX12YMR026C QRI1P43123 477 aaKnown RBP6.3□□□□□ -1.4
PEX12YMR026C ENP2P48234 707 aaKnown RBP6.3□□□□□ -1.4
PEX12YMR026C FOL1P53848 824 aa6.3□□□□□ -1.4
PEX12YMR026C YDL086WQ07505 273 aa6.3□□□□□ -1.4
PEX12YMR026C TAF3Q12297 353 aa6.3□□□□□ -1.4
PEX12YMR026C FUB1P25659 250 aa6.29□□□□□ -1.4
PEX12YMR026C YHR097CP38809 366 aaKnown RBP6.29□□□□□ -1.4
PEX12YMR026C NGL1Q08213 363 aaKnown RBP6.29□□□□□ -1.4
PEX12YMR026C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
PEX12YMR026C HXT4P32467 576 aa6.28□□□□□ -1.4
PEX12YMR026C ENP1P38333 483 aaKnown RBP6.28□□□□□ -1.4
PEX12YMR026C YHR033WP38690 423 aa6.28□□□□□ -1.4
PEX12YMR026C SPC105P53148 917 aa6.28□□□□□ -1.4
PEX12YMR026C HCA4P20448 770 aaKnown RBP6.27□□□□□ -1.41
PEX12YMR026C DMC1P25453 334 aa6.27□□□□□ -1.41
PEX12YMR026C HEM12P32347 362 aaPredicted RBP6.27□□□□□ -1.41
PEX12YMR026C CDS1P38221 457 aa6.27□□□□□ -1.41
PEX12YMR026C CRG1P38892 291 aaRIP-Chip data6.27□□□□□ -1.41not detected
PEX12YMR026C BDH2P39713 417 aa6.27□□□□□ -1.41
PEX12YMR026C PRM2P40534 656 aa6.27□□□□□ -1.41
PEX12YMR026C SLD3P53135 668 aa6.27□□□□□ -1.41
PEX12YMR026C VPS73P53142 486 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms