RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA6	YLR447C	SSZ1	P38788	538 aa	Known RBP	4.73	□□□□□ -1.65
VMA6	YLR447C	KHA1	P40309	873 aa		4.73	□□□□□ -1.65
VMA6	YLR447C	GAT1	P43574	510 aa		4.73	□□□□□ -1.65
VMA6	YLR447C	NET1	P47035	1189 aa		4.73	□□□□□ -1.65
VMA6	YLR447C	BNA3	P47039	444 aa	Known RBP	4.73	□□□□□ -1.65
VMA6	YLR447C	BRE5	P53741	515 aa	Known RBP	4.73	□□□□□ -1.65
VMA6	YLR447C	LEE1	Q02799	301 aa	Known RBP	4.73	□□□□□ -1.65
VMA6	YLR447C	PHO5	P00635	467 aa		4.72	□□□□□ -1.65
VMA6	YLR447C	THI4	P32318	326 aa		4.72	□□□□□ -1.65
VMA6	YLR447C	SEC6	P32844	805 aa		4.72	□□□□□ -1.65
VMA6	YLR447C	YHR202W	P38887	602 aa		4.72	□□□□□ -1.65
VMA6	YLR447C	XBP1	P40489	647 aa		4.72	□□□□□ -1.65
VMA6	YLR447C	YIL077C	P40508	320 aa		4.72	□□□□□ -1.65
VMA6	YLR447C	PMT6	P42934	759 aa		4.72	□□□□□ -1.65
VMA6	YLR447C	RFX1	P48743	811 aa		4.72	□□□□□ -1.65
VMA6	YLR447C	ORC1	P54784	914 aa	Predicted RBP	4.72	□□□□□ -1.65
VMA6	YLR447C	NGL2	Q03264	515 aa	Known RBP	4.72	□□□□□ -1.65
VMA6	YLR447C	GIN4	Q12263	1142 aa		4.72	□□□□□ -1.65
VMA6	YLR447C	KIN82	P25341	720 aa		4.71	□□□□□ -1.66
VMA6	YLR447C	YMC1	P32331	307 aa		4.71	□□□□□ -1.66
VMA6	YLR447C	YKR075C	P36155	307 aa		4.71	□□□□□ -1.66
VMA6	YLR447C	AKL1	P38080	1108 aa	Known RBP	4.71	□□□□□ -1.66
VMA6	YLR447C	BUD6	P41697	788 aa		4.71	□□□□□ -1.66
VMA6	YLR447C	ATG36	P46983	293 aa		4.71	□□□□□ -1.66
VMA6	YLR447C	YJR039W	P47107	1121 aa		4.71	□□□□□ -1.66
VMA6	YLR447C	ASN1	P49089	572 aa	Known RBP	4.71	□□□□□ -1.66
VMA6	YLR447C	AIM14	P53109	570 aa		4.71	□□□□□ -1.66
VMA6	YLR447C	DIP5	P53388	608 aa		4.71	□□□□□ -1.66
VMA6	YLR447C	ATG33	Q06485	197 aa		4.71	□□□□□ -1.66
VMA6	YLR447C	VHS3	Q08438	674 aa		4.71	□□□□□ -1.66
VMA6	YLR447C	ULA1	Q12059	462 aa		4.71	□□□□□ -1.66
VMA6	YLR447C	RPS9B	P05755	195 aa	Known RBP	4.7	□□□□□ -1.66
VMA6	YLR447C	COS111	P38308	924 aa		4.7	□□□□□ -1.66
VMA6	YLR447C	MIT1	P40002	666 aa		4.7	□□□□□ -1.66
VMA6	YLR447C	VBA4	Q04602	768 aa	Known RBP	4.7	□□□□□ -1.66
VMA6	YLR447C	RKI1	Q12189	258 aa		4.7	□□□□□ -1.66
VMA6	YLR447C	PCL2	P25693	308 aa		4.69	□□□□□ -1.66
VMA6	YLR447C	TAX4	P47030	604 aa		4.69	□□□□□ -1.66
VMA6	YLR447C	BFA1	P47113	574 aa		4.69	□□□□□ -1.66
VMA6	YLR447C	UFO1	Q04511	668 aa		4.69	□□□□□ -1.66
VMA6	YLR447C	YFT2	Q06676	274 aa		4.69	□□□□□ -1.66
VMA6	YLR447C	TPK2	P06245	380 aa		4.68	□□□□□ -1.66
VMA6	YLR447C	HMG1	P12683	1054 aa		4.68	□□□□□ -1.66
VMA6	YLR447C	SFL1	P20134	766 aa		4.68	□□□□□ -1.66
VMA6	YLR447C	APN1	P22936	367 aa		4.68	□□□□□ -1.66
VMA6	YLR447C	PET127	P32606	800 aa		4.68	□□□□□ -1.66
VMA6	YLR447C	MAL31	P38156	614 aa		4.68	□□□□□ -1.66
VMA6	YLR447C	FRS1	P15624	595 aa	Known RBP	4.67	□□□□□ -1.66
VMA6	YLR447C	PRP22	P24384	1145 aa	Known RBP	4.67	□□□□□ -1.66
VMA6	YLR447C	PCM1	P38628	557 aa	Known RBP	4.67	□□□□□ -1.66
VMA6	YLR447C	OSW7	P43611	510 aa		4.67	□□□□□ -1.66
VMA6	YLR447C	BIT61	P47041	543 aa		4.67	□□□□□ -1.66
VMA6	YLR447C	DAK1	P54838	584 aa	Known RBP	4.67	□□□□□ -1.66
VMA6	YLR447C	YDR179W-A	Q03983	463 aa		4.67	□□□□□ -1.66
VMA6	YLR447C	POB3	Q04636	552 aa	Known RBP	4.67	□□□□□ -1.66
VMA6	YLR447C	VPS36	Q06696	566 aa		4.67	□□□□□ -1.66
VMA6	YLR447C	RGT2	Q12300	763 aa		4.67	□□□□□ -1.66
VMA6	YLR447C	THI6	P41835	540 aa		4.66	□□□□□ -1.66
VMA6	YLR447C	DCS2	Q12123	353 aa		4.66	□□□□□ -1.66
VMA6	YLR447C	ELF1	P36053	145 aa		4.65	□□□□□ -1.67
VMA6	YLR447C	YMR210W	Q03649	449 aa		4.65	□□□□□ -1.67
VMA6	YLR447C	HFD1	Q04458	532 aa		4.65	□□□□□ -1.67
VMA6	YLR447C	ORM2	Q06144	216 aa		4.65	□□□□□ -1.67
VMA6	YLR447C	MSS1	P32559	526 aa	Predicted RBP	4.64	□□□□□ -1.67
VMA6	YLR447C	NUG1	P40010	520 aa	Known RBP	4.64	□□□□□ -1.67
VMA6	YLR447C	CCT5	P40413	562 aa	Known RBP	4.64	□□□□□ -1.67
VMA6	YLR447C	IMG2	P25642	146 aa	Predicted RBP	4.63	□□□□□ -1.67
VMA6	YLR447C	HOT13	P36078	116 aa		4.63	□□□□□ -1.67
VMA6	YLR447C	OCA5	P38738	679 aa		4.63	□□□□□ -1.67
VMA6	YLR447C	IZH3	Q07959	543 aa		4.63	□□□□□ -1.67
VMA6	YLR447C	AAD3	P25612	363 aa		4.62	□□□□□ -1.67
VMA6	YLR447C	YPT7	P32939	208 aa		4.62	□□□□□ -1.67
VMA6	YLR447C	PIH1	P38768	344 aa		4.62	□□□□□ -1.67
VMA6	YLR447C	SNF12	P53628	566 aa		4.62	□□□□□ -1.67
VMA6	YLR447C	MPS1	P54199	764 aa		4.62	□□□□□ -1.67
VMA6	YLR447C	ARG7	Q04728	441 aa		4.62	□□□□□ -1.67
VMA6	YLR447C	GUD1	Q07729	489 aa		4.62	□□□□□ -1.67
VMA6	YLR447C	AI5_ALPHA	Q9ZZX1	630 aa		4.62	□□□□□ -1.67
VMA6	YLR447C	RIM4	P38741	713 aa		4.61	□□□□□ -1.67
VMA6	YLR447C	BEM4	P39011	633 aa		4.61	□□□□□ -1.67
VMA6	YLR447C	PXA1	P41909	870 aa		4.61	□□□□□ -1.67
VMA6	YLR447C	SCS3	P53012	380 aa		4.61	□□□□□ -1.67
VMA6	YLR447C	CPR8	P53728	308 aa		4.61	□□□□□ -1.67
VMA6	YLR447C	TRS23	Q03784	219 aa		4.61	□□□□□ -1.67
VMA6	YLR447C	IRC3	Q06683	689 aa		4.61	□□□□□ -1.67
VMA6	YLR447C	NTG2	Q08214	380 aa		4.61	□□□□□ -1.67
VMA6	YLR447C	ULP2	P40537	1034 aa	Predicted RBP	4.6	□□□□□ -1.67
VMA6	YLR447C	YGL117W	P53133	265 aa		4.6	□□□□□ -1.67
VMA6	YLR447C	STE4	P18851	423 aa		4.59	□□□□□ -1.67
VMA6	YLR447C	YKU70	P32807	602 aa		4.59	□□□□□ -1.67
VMA6	YLR447C	MET13	P53128	600 aa		4.59	□□□□□ -1.67
VMA6	YLR447C	STP1	Q00947	519 aa		4.59	□□□□□ -1.67
VMA6	YLR447C	PPN1	Q04119	674 aa		4.59	□□□□□ -1.67
VMA6	YLR447C	YLR407W	Q06070	228 aa		4.59	□□□□□ -1.67
VMA6	YLR447C	PSA1	P41940	361 aa	Known RBP	4.58	□□□□□ -1.68
VMA6	YLR447C	CEF1	Q03654	590 aa	Predicted RBP	4.58	□□□□□ -1.68
VMA6	YLR447C	MBR1	P23493	339 aa		4.57	□□□□□ -1.68
VMA6	YLR447C	MRPL9	P31334	269 aa		4.57	□□□□□ -1.68
VMA6	YLR447C	PPE1	P38796	400 aa		4.57	□□□□□ -1.68
VMA6	YLR447C	YNL193W	P53870	558 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms