RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W EXO84P38261 753 aa5.78□□□□□ -1.48
VPS36YLR417W TAF4P50105 388 aa5.78□□□□□ -1.48
VPS36YLR417W SPT20P50875 604 aa5.78□□□□□ -1.48
VPS36YLR417W RCR2Q03446 210 aaKnown RBP5.78□□□□□ -1.48
VPS36YLR417W VBA4Q04602 768 aaKnown RBP5.78□□□□□ -1.48
VPS36YLR417W GAD1Q04792 585 aa5.78□□□□□ -1.48
VPS36YLR417W ERG20P08524 352 aaKnown RBP5.77□□□□□ -1.49
VPS36YLR417W KAR4P25583 335 aa5.77□□□□□ -1.49
VPS36YLR417W TAF5P38129 798 aa5.77□□□□□ -1.49
VPS36YLR417W SCS2P40075 244 aaKnown RBP5.77□□□□□ -1.49
VPS36YLR417W RPT2P40327 437 aaKnown RBP5.77□□□□□ -1.49
VPS36YLR417W BUD8P41698 603 aa5.77□□□□□ -1.49
VPS36YLR417W LSB3P43603 459 aaKnown RBP5.77□□□□□ -1.49
VPS36YLR417W COX18P53239 316 aa5.77□□□□□ -1.49
VPS36YLR417W HIM1Q06674 414 aa5.77□□□□□ -1.49
VPS36YLR417W TGL5Q12043 749 aa5.77□□□□□ -1.49
VPS36YLR417W VPS5Q92331 675 aa5.77□□□□□ -1.49
VPS36YLR417W RPS13P05756 151 aaKnown RBP5.77□□□□□ -1.49
VPS36YLR417W SEC18P18759 758 aaKnown RBP5.77□□□□□ -1.49
VPS36YLR417W RNR1P21524 888 aaKnown RBP5.77□□□□□ -1.49
VPS36YLR417W PRP22P24384 1145 aaKnown RBP5.77□□□□□ -1.49
VPS36YLR417W TEX1P53851 422 aaKnown RBP5.77□□□□□ -1.49
VPS36YLR417W VPS36Q06696 566 aa5.77□□□□□ -1.49
VPS36YLR417W ATG11Q12527 1178 aa5.77□□□□□ -1.49
VPS36YLR417W SOD2P00447 233 aa5.76□□□□□ -1.49
VPS36YLR417W VAS1P07806 1104 aaKnown RBP5.76□□□□□ -1.49
VPS36YLR417W SSH4P32343 579 aa5.76□□□□□ -1.49
VPS36YLR417W BIT61P47041 543 aa5.76□□□□□ -1.49
VPS36YLR417W ENB1Q08299 606 aa5.76□□□□□ -1.49
VPS36YLR417W ADH4P10127 382 aa5.75□□□□□ -1.49
VPS36YLR417W YHR033WP38690 423 aa5.75□□□□□ -1.49
VPS36YLR417W VID27P40157 782 aa5.75□□□□□ -1.49
VPS36YLR417W YNL195CP40168 261 aa5.75□□□□□ -1.49
VPS36YLR417W MAD2P40958 196 aa5.75□□□□□ -1.49
VPS36YLR417W NOP9P47077 666 aaKnown RBP5.75□□□□□ -1.49
VPS36YLR417W PEF1P53238 335 aa5.75□□□□□ -1.49
VPS36YLR417W MRPS35P53292 345 aa5.75□□□□□ -1.49
VPS36YLR417W MOT3P54785 490 aaKnown RBP5.75□□□□□ -1.49
VPS36YLR417W YML131WQ03102 365 aa5.75□□□□□ -1.49
VPS36YLR417W CTK1Q03957 528 aaKnown RBP5.75□□□□□ -1.49
VPS36YLR417W DIA2Q08496 732 aaPredicted RBP5.75□□□□□ -1.49
VPS36YLR417W RTK1Q12100 620 aaPredicted RBP5.75□□□□□ -1.49
VPS36YLR417W CAD1P24813 409 aaKnown RBP5.74□□□□□ -1.49
VPS36YLR417W KIN82P25341 720 aa5.74□□□□□ -1.49
VPS36YLR417W CCT3P39077 534 aaKnown RBP5.74□□□□□ -1.49
VPS36YLR417W SWD1P39706 426 aa5.74□□□□□ -1.49
VPS36YLR417W MNT2P53059 558 aa5.74□□□□□ -1.49
VPS36YLR417W TRI1Q05024 226 aa5.74□□□□□ -1.49
VPS36YLR417W POM34Q12445 299 aa5.74□□□□□ -1.49
VPS36YLR417W HRP1Q99383 534 aaKnown RBP5.74□□□□□ -1.49
VPS36YLR417W ERG6P25087 383 aaKnown RBP5.74□□□□□ -1.49
VPS36YLR417W CWH43P25618 953 aa5.74□□□□□ -1.49
VPS36YLR417W TSA1P34760 196 aaKnown RBP5.74□□□□□ -1.49
VPS36YLR417W SHM2P37291 469 aaKnown RBP5.74□□□□□ -1.49
VPS36YLR417W APM3P38153 483 aa5.74□□□□□ -1.49
VPS36YLR417W MAD3P47074 515 aa5.74□□□□□ -1.49
VPS36YLR417W ERG5P54781 538 aa5.74□□□□□ -1.49
VPS36YLR417W CIA1Q05583 330 aa5.74□□□□□ -1.49
VPS36YLR417W BLS1Q06071 122 aa5.74□□□□□ -1.49
VPS36YLR417W DIN7Q12086 430 aa5.74□□□□□ -1.49
VPS36YLR417W CBP3P21560 335 aa5.73□□□□□ -1.49
VPS36YLR417W PEX1P24004 1043 aa5.73□□□□□ -1.49
VPS36YLR417W PRE4P30657 266 aa5.73□□□□□ -1.49
VPS36YLR417W YLF2P38746 405 aa5.73□□□□□ -1.49
VPS36YLR417W FKH2P41813 862 aa5.73□□□□□ -1.49
VPS36YLR417W RIM8P53179 542 aa5.73□□□□□ -1.49
VPS36YLR417W ECM3Q99252 613 aa5.73□□□□□ -1.49
VPS36YLR417W PRM2P40534 656 aa5.72□□□□□ -1.49
VPS36YLR417W BAP3P41815 604 aa5.72□□□□□ -1.49
VPS36YLR417W IML2P47031 731 aa5.72□□□□□ -1.49
VPS36YLR417W AMA1P50082 593 aa5.72□□□□□ -1.49
VPS36YLR417W SPO1P53541 631 aa5.72□□□□□ -1.49
VPS36YLR417W YNR071CP53757 342 aa5.72□□□□□ -1.49
VPS36YLR417W SQS1P53866 767 aaKnown RBP5.72□□□□□ -1.49
VPS36YLR417W TRS130Q03660 1102 aa5.72□□□□□ -1.49
VPS36YLR417W RGA2Q06407 1009 aa5.72□□□□□ -1.49
VPS36YLR417W LAT1P12695 482 aaKnown RBP5.71□□□□□ -1.49
VPS36YLR417W MTC7P32633 139 aa5.71□□□□□ -1.49
VPS36YLR417W LST4P34239 828 aa5.71□□□□□ -1.49
VPS36YLR417W AIM3P38266 947 aaKnown RBP5.71□□□□□ -1.49
VPS36YLR417W SPC72P39723 622 aa5.71□□□□□ -1.49
VPS36YLR417W GET2P40056 285 aa5.71□□□□□ -1.49
VPS36YLR417W YIR042CP40586 236 aa5.71□□□□□ -1.49
VPS36YLR417W ERR3P42222 437 aa5.71□□□□□ -1.49
VPS36YLR417W TAF1P46677 1066 aa5.71□□□□□ -1.49
VPS36YLR417W DBP10Q12389 995 aaKnown RBP5.71□□□□□ -1.49
VPS36YLR417W RPS9BP05755 195 aaKnown RBP5.71□□□□□ -1.5
VPS36YLR417W SEC15P22224 910 aa5.71□□□□□ -1.5
VPS36YLR417W SEG2P34250 1132 aa5.71□□□□□ -1.5
VPS36YLR417W RMA1P36001 430 aaKnown RBP5.71□□□□□ -1.5
VPS36YLR417W IMA5P40884 581 aa5.71□□□□□ -1.5
VPS36YLR417W EIS1Q05050 843 aaKnown RBP5.71□□□□□ -1.5
VPS36YLR417W CDA2Q06703 312 aa5.71□□□□□ -1.5
VPS36YLR417W MCH5Q08777 521 aa5.71□□□□□ -1.5
VPS36YLR417W HOS1Q12214 470 aa5.71□□□□□ -1.5
VPS36YLR417W TRP4P07285 380 aaPredicted RBP5.7□□□□□ -1.5
VPS36YLR417W HMG2P12684 1045 aa5.7□□□□□ -1.5
VPS36YLR417W STE11P23561 717 aa5.7□□□□□ -1.5
VPS36YLR417W PPE1P38796 400 aa5.7□□□□□ -1.5
VPS36YLR417W LYS9P38999 446 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms