RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W HEK2P38199 381 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91 RIP-Chip
SFP1YLR403W ALD5P40047 520 aaKnown RBP9.38□□□□□ -0.91
SFP1YLR403W YJL049WP47048 450 aa9.38□□□□□ -0.91
SFP1YLR403W BBC1P47068 1157 aa9.38□□□□□ -0.91
SFP1YLR403W SAP4P53036 818 aa9.38□□□□□ -0.91
SFP1YLR403W ARC35P53731 342 aaKnown RBP9.38□□□□□ -0.91
SFP1YLR403W SNU23Q12368 194 aaPredicted RBP9.38□□□□□ -0.91
SFP1YLR403W BNR1P40450 1375 aa9.37□□□□□ -0.91
SFP1YLR403W KSS1P14681 368 aa9.37□□□□□ -0.91
SFP1YLR403W RDS2P19541 446 aaKnown RBP9.37□□□□□ -0.91
SFP1YLR403W SWI4P25302 1093 aaKnown RBP9.37□□□□□ -0.91
SFP1YLR403W ACH1P32316 526 aa9.37□□□□□ -0.91
SFP1YLR403W CCT6P39079 546 aa9.37□□□□□ -0.91
SFP1YLR403W YMR010WQ03687 405 aa9.37□□□□□ -0.91
SFP1YLR403W RPO41P13433 1351 aaKnown RBP9.37□□□□□ -0.91
SFP1YLR403W RKR1Q04781 1562 aa9.37□□□□□ -0.91
SFP1YLR403W POM152P39685 1337 aa9.37□□□□□ -0.91
SFP1YLR403W MPH2P0CD99 609 aa9.36□□□□□ -0.91
SFP1YLR403W LAT1P12695 482 aaKnown RBP9.36□□□□□ -0.91
SFP1YLR403W GRX7P38068 203 aa9.36□□□□□ -0.91
SFP1YLR403W CCZ1P38273 704 aa9.36□□□□□ -0.91
SFP1YLR403W AIM9P40053 627 aaKnown RBP9.36□□□□□ -0.91
SFP1YLR403W PDS1P40316 373 aaPredicted RBP9.36□□□□□ -0.91
SFP1YLR403W HGH1P48362 394 aaKnown RBP9.36□□□□□ -0.91
SFP1YLR403W CNM67P53865 581 aaKnown RBP9.36□□□□□ -0.91
SFP1YLR403W ISU1Q03020 165 aa9.36□□□□□ -0.91
SFP1YLR403W HFD1Q04458 532 aa9.36□□□□□ -0.91
SFP1YLR403W CMC2Q3E7A4 109 aa9.36□□□□□ -0.91
SFP1YLR403W YOS9Q99220 542 aa9.36□□□□□ -0.91
SFP1YLR403W DUR1,2P32528 1835 aaKnown RBP9.36□□□□□ -0.91
SFP1YLR403W TRP2P00899 507 aaKnown RBP9.36□□□□□ -0.91
SFP1YLR403W STE3P06783 470 aa9.36□□□□□ -0.91
SFP1YLR403W LPD1P09624 499 aaKnown RBP9.36□□□□□ -0.91
SFP1YLR403W SIN4P32259 974 aa9.36□□□□□ -0.91
SFP1YLR403W VPH1P32563 840 aaKnown RBP9.36□□□□□ -0.91
SFP1YLR403W GLG1P36143 616 aa9.36□□□□□ -0.91
SFP1YLR403W DSE4P53753 1117 aa9.36□□□□□ -0.91
SFP1YLR403W YNL193WP53870 558 aa9.36□□□□□ -0.91
SFP1YLR403W BOP3P53958 396 aa9.36□□□□□ -0.91
SFP1YLR403W REX3Q12090 404 aa9.36□□□□□ -0.91
SFP1YLR403W ULS1Q08562 1619 aa9.35□□□□□ -0.91
SFP1YLR403W GPA1P08539 472 aa9.35□□□□□ -0.91
SFP1YLR403W STE12P13574 688 aa9.35□□□□□ -0.91
SFP1YLR403W KTR2P33550 425 aa9.35□□□□□ -0.91
SFP1YLR403W CHK1P38147 527 aa9.35□□□□□ -0.91
SFP1YLR403W MMM1P41800 426 aa9.35□□□□□ -0.91
SFP1YLR403W AGX1P43567 385 aa9.35□□□□□ -0.91
SFP1YLR403W UTP8P53276 713 aaKnown RBP9.35□□□□□ -0.91
SFP1YLR403W PRO2P54885 456 aaKnown RBP9.35□□□□□ -0.91
SFP1YLR403W ARX1Q03862 593 aaKnown RBP9.35□□□□□ -0.91
SFP1YLR403W GPI13Q07830 1017 aa9.35□□□□□ -0.91
SFP1YLR403W YSP2Q06681 1438 aa9.35□□□□□ -0.91
SFP1YLR403W RPS17AP02407 136 aaKnown RBP9.35□□□□□ -0.91
SFP1YLR403W RPS17BP14127 136 aaKnown RBP9.35□□□□□ -0.91
SFP1YLR403W TRX2P22803 104 aaKnown RBP9.35□□□□□ -0.91
SFP1YLR403W NTH2P35172 780 aa9.35□□□□□ -0.91
SFP1YLR403W YPT52P36018 234 aaKnown RBP9.35□□□□□ -0.91
SFP1YLR403W YBR225WP38321 900 aa9.35□□□□□ -0.91
SFP1YLR403W GRE3P38715 327 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91not detected
SFP1YLR403W MAD3P47074 515 aa9.35□□□□□ -0.91
SFP1YLR403W OYE2Q03558 400 aaKnown RBP9.35□□□□□ -0.91
SFP1YLR403W IVY1Q04934 453 aa9.35□□□□□ -0.91
SFP1YLR403W ADY3Q07732 790 aa9.35□□□□□ -0.91
SFP1YLR403W PHM7Q12252 991 aa9.35□□□□□ -0.91
SFP1YLR403W DDP1Q99321 188 aaKnown RBP9.35□□□□□ -0.91
SFP1YLR403W SEM1O94742 89 aa9.34□□□□□ -0.91
SFP1YLR403W RET1P22276 1149 aaKnown RBP9.34□□□□□ -0.91
SFP1YLR403W CWH43P25618 953 aa9.34□□□□□ -0.91
SFP1YLR403W ZIP1P31111 875 aa9.34□□□□□ -0.91
SFP1YLR403W DOA4P32571 926 aa9.34□□□□□ -0.91
SFP1YLR403W YJL181WP46987 611 aa9.34□□□□□ -0.91
SFP1YLR403W ARP10Q04549 284 aa9.34□□□□□ -0.91
SFP1YLR403W GAS4Q08271 471 aa9.34□□□□□ -0.91
SFP1YLR403W MRN1Q08925 612 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91not detected
SFP1YLR403W NUR1Q12066 484 aa9.34□□□□□ -0.91
SFP1YLR403W MNL2Q12205 849 aa9.34□□□□□ -0.91
SFP1YLR403W RTR2Q12378 196 aa9.34□□□□□ -0.91
SFP1YLR403W RMP1Q12530 201 aa9.34□□□□□ -0.91
SFP1YLR403W MSB1P21339 1137 aaKnown RBP9.33□□□□□ -0.92
SFP1YLR403W VMA6P32366 345 aaKnown RBP9.33□□□□□ -0.92
SFP1YLR403W MVD1P32377 396 aaKnown RBP9.33□□□□□ -0.92
SFP1YLR403W SRP40P32583 406 aaPredicted RBP9.33□□□□□ -0.92
SFP1YLR403W PPQ1P32945 549 aa9.33□□□□□ -0.92
SFP1YLR403W PRX1P34227 261 aaKnown RBP9.33□□□□□ -0.92
SFP1YLR403W ECM31P38122 312 aa9.33□□□□□ -0.92
SFP1YLR403W TDA3P38758 523 aa9.33□□□□□ -0.92
SFP1YLR403W TOF1P53840 1238 aa9.33□□□□□ -0.92
SFP1YLR403W GMC2Q06201 188 aa9.33□□□□□ -0.92
SFP1YLR403W YKL023WP36103 277 aaKnown RBP9.33□□□□□ -0.92
SFP1YLR403W BCH2P36122 765 aa9.33□□□□□ -0.92
SFP1YLR403W GLO3P38682 493 aaKnown RBP9.33□□□□□ -0.92
SFP1YLR403W CCC2P38995 1004 aa9.33□□□□□ -0.92
SFP1YLR403W BUD16P39988 312 aa9.33□□□□□ -0.92
SFP1YLR403W QRI1P43123 477 aaKnown RBP9.33□□□□□ -0.92
SFP1YLR403W PGA2P53903 129 aa9.33□□□□□ -0.92
SFP1YLR403W NOG1Q02892 647 aaKnown RBP9.33□□□□□ -0.92
SFP1YLR403W SPC2Q04969 178 aa9.33□□□□□ -0.92
SFP1YLR403W GET4Q12125 312 aa9.33□□□□□ -0.92
SFP1YLR403W YMR084WA2P2R3 262 aa9.32□□□□□ -0.92
SFP1YLR403W THS1P04801 734 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms