RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W YOL098CQ12496 1037 aa4.86□□□□□ -1.63
CBF5YLR175W VPS13Q07878 3144 aa4.86□□□□□ -1.63
CBF5YLR175W RNR1P21524 888 aaKnown RBP4.85□□□□□ -1.63
CBF5YLR175W DAL2P25335 343 aa4.85□□□□□ -1.63
CBF5YLR175W CDC11P32458 415 aa4.85□□□□□ -1.63
CBF5YLR175W WHI3P34761 661 aaKnown RBP4.85□□□□□ -1.63
CBF5YLR175W BLI1P35727 113 aa4.85□□□□□ -1.63
CBF5YLR175W KDX1P36005 433 aa4.85□□□□□ -1.63
CBF5YLR175W DRE2P36152 348 aa4.85□□□□□ -1.63
CBF5YLR175W YMC2P38087 329 aa4.85□□□□□ -1.63
CBF5YLR175W TCD1P38756 429 aa4.85□□□□□ -1.63
CBF5YLR175W SET5P38890 526 aaKnown RBP4.85□□□□□ -1.63
CBF5YLR175W SAH1P39954 449 aaKnown RBP4.85□□□□□ -1.63
CBF5YLR175W DLD3P39976 496 aaKnown RBP4.85□□□□□ -1.63
CBF5YLR175W BUD16P39988 312 aa4.85□□□□□ -1.63
CBF5YLR175W YTA12P40341 825 aa4.85□□□□□ -1.63
CBF5YLR175W SEC9P40357 651 aa4.85□□□□□ -1.63
CBF5YLR175W INP51P40559 946 aaKnown RBP4.85□□□□□ -1.63
CBF5YLR175W SPO74P45819 413 aa4.85□□□□□ -1.63
CBF5YLR175W PHO86P46956 311 aa4.85□□□□□ -1.63
CBF5YLR175W PUS2P53167 370 aa4.85□□□□□ -1.63
CBF5YLR175W DRN1P53255 507 aaKnown RBP4.85□□□□□ -1.63
CBF5YLR175W NOP13P53883 403 aaKnown RBP RIP-Chip data4.85□□□□□ -1.63not detected
CBF5YLR175W SOV1Q04748 898 aa4.85□□□□□ -1.63
CBF5YLR175W SML1Q04964 104 aa4.85□□□□□ -1.63
CBF5YLR175W NUT2Q06213 157 aa4.85□□□□□ -1.63
CBF5YLR175W VAC14Q06708 880 aa4.85□□□□□ -1.63
CBF5YLR175W SIL1Q08199 421 aa4.85□□□□□ -1.63
CBF5YLR175W DNL4Q08387 944 aaPredicted RBP4.85□□□□□ -1.63
CBF5YLR175W ABP140Q08641 628 aaKnown RBP4.85□□□□□ -1.63
CBF5YLR175W WHI5Q12416 295 aa4.85□□□□□ -1.63
CBF5YLR175W OSH2Q12451 1283 aa4.85□□□□□ -1.63
CBF5YLR175W CTF3Q12748 733 aa4.85□□□□□ -1.63
CBF5YLR175W ECM3Q99252 613 aa4.85□□□□□ -1.63
CBF5YLR175W ADE4P04046 510 aaKnown RBP4.84□□□□□ -1.63
CBF5YLR175W GAL10P04397 699 aa4.84□□□□□ -1.63
CBF5YLR175W MCM1P11746 286 aa4.84□□□□□ -1.63
CBF5YLR175W STE11P23561 717 aa4.84□□□□□ -1.63
CBF5YLR175W RRT12P25381 491 aa4.84□□□□□ -1.63
CBF5YLR175W RSA4P25382 515 aaKnown RBP4.84□□□□□ -1.63
CBF5YLR175W YEL043WP32618 956 aa4.84□□□□□ -1.63
CBF5YLR175W ISC10P32645 267 aa4.84□□□□□ -1.63
CBF5YLR175W YKL050CP35736 922 aa4.84□□□□□ -1.63
CBF5YLR175W EXO5P38289 585 aa4.84□□□□□ -1.63
CBF5YLR175W YMR124WP39523 943 aaKnown RBP4.84□□□□□ -1.63
CBF5YLR175W FIR1P40020 876 aa4.84□□□□□ -1.63
CBF5YLR175W PSY2P40164 858 aa4.84□□□□□ -1.63
CBF5YLR175W ESL1P40456 1118 aa4.84□□□□□ -1.63
CBF5YLR175W SBE2P42223 864 aaKnown RBP4.84□□□□□ -1.63
CBF5YLR175W SUM1P46676 1062 aa4.84□□□□□ -1.63
CBF5YLR175W CWC21Q03375 135 aaKnown RBP4.84□□□□□ -1.63
CBF5YLR175W YMR018WQ04364 514 aa4.84□□□□□ -1.63
CBF5YLR175W YPQ2Q06328 317 aa4.84□□□□□ -1.63
CBF5YLR175W MAG2Q06436 670 aaKnown RBP4.84□□□□□ -1.63
CBF5YLR175W YOR022CQ12204 715 aa4.84□□□□□ -1.63
CBF5YLR175W CHS1P08004 1131 aa4.83□□□□□ -1.64
CBF5YLR175W YER152CP10356 443 aa4.83□□□□□ -1.64
CBF5YLR175W ERG11P10614 530 aa4.83□□□□□ -1.64
CBF5YLR175W EST1P17214 699 aaPredicted RBP4.83□□□□□ -1.64
CBF5YLR175W PET123P17558 318 aa4.83□□□□□ -1.64
CBF5YLR175W CBF2P32504 956 aa4.83□□□□□ -1.64
CBF5YLR175W MRPL7P36519 292 aa4.83□□□□□ -1.64
CBF5YLR175W PAM1P37304 830 aaKnown RBP4.83□□□□□ -1.64
CBF5YLR175W NOP4P37838 685 aaKnown RBP4.83□□□□□ -1.64
CBF5YLR175W SLX1P38324 304 aa4.83□□□□□ -1.64
CBF5YLR175W SPC72P39723 622 aa4.83□□□□□ -1.64
CBF5YLR175W NDC80P40460 691 aa4.83□□□□□ -1.64
CBF5YLR175W CEP3P40969 608 aa4.83□□□□□ -1.64
CBF5YLR175W ZAP1P47043 880 aa4.83□□□□□ -1.64
CBF5YLR175W YJR054WP47114 497 aa4.83□□□□□ -1.64
CBF5YLR175W FOL2P51601 243 aaKnown RBP4.83□□□□□ -1.64
CBF5YLR175W ALT1P52893 592 aa4.83□□□□□ -1.64
CBF5YLR175W KAP114P53067 1004 aa4.83□□□□□ -1.64
CBF5YLR175W HOP2P53187 214 aa4.83□□□□□ -1.64
CBF5YLR175W YGR111WP53265 400 aa4.83□□□□□ -1.64
CBF5YLR175W MAL13P53338 473 aa4.83□□□□□ -1.64
CBF5YLR175W HOS3Q02959 697 aaKnown RBP4.83□□□□□ -1.64
CBF5YLR175W VPS60Q03390 229 aa4.83□□□□□ -1.64
CBF5YLR175W SKY1Q03656 742 aa4.83□□□□□ -1.64
CBF5YLR175W TIF35Q04067 274 aaKnown RBP4.83□□□□□ -1.64
CBF5YLR175W RRP15Q06511 250 aaPredicted RBP4.83□□□□□ -1.64
CBF5YLR175W SDH5Q08230 162 aa4.83□□□□□ -1.64
CBF5YLR175W YPR027CQ12079 277 aa4.83□□□□□ -1.64
CBF5YLR175W FRT1Q99332 602 aa4.83□□□□□ -1.64
CBF5YLR175W ADE3P07245 946 aaKnown RBP4.82□□□□□ -1.64
CBF5YLR175W GFA1P14742 717 aaKnown RBP4.82□□□□□ -1.64
CBF5YLR175W DPB3P27344 201 aa4.82□□□□□ -1.64
CBF5YLR175W RCK2P38623 610 aa4.82□□□□□ -1.64
CBF5YLR175W HXT5P38695 592 aa4.82□□□□□ -1.64
CBF5YLR175W DSE1P40077 573 aa4.82□□□□□ -1.64
CBF5YLR175W EEB1Q02891 456 aa4.82□□□□□ -1.64
CBF5YLR175W CEF1Q03654 590 aaPredicted RBP4.82□□□□□ -1.64
CBF5YLR175W SNU56Q03782 492 aaKnown RBP4.82□□□□□ -1.64
CBF5YLR175W ATG16Q03818 150 aa4.82□□□□□ -1.64
CBF5YLR175W POB3Q04636 552 aaKnown RBP4.82□□□□□ -1.64
CBF5YLR175W YDR222WQ04925 415 aa4.82□□□□□ -1.64
CBF5YLR175W CDD1Q06549 142 aa4.82□□□□□ -1.64
CBF5YLR175W BI2P03873 423 aa4.81□□□□□ -1.64
CBF5YLR175W BI4P03879 638 aa4.81□□□□□ -1.64
CBF5YLR175W TPK1P06244 397 aa4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 367.6 ms