RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	VHR1	P40522	640 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	BUD8	P41698	603 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	PRP31	P49704	494 aa	Predicted RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	PRP43	P53131	767 aa	Known RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	TEX1	P53851	422 aa	Known RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	POM34	Q12445	299 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	SSK2	P53599	1579 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	XRN1	P22147	1528 aa	Known RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	RPS13	P05756	151 aa	Known RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	KIN82	P25341	720 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	IMG2	P25642	146 aa	Predicted RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	PRE4	P30657	266 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	LRG1	P35688	1017 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	YHR202W	P38887	602 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	VID28	P40547	921 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	SAP185	P40856	1058 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	NOP9	P47077	666 aa	Known RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	YBP2	P53169	641 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	YAP1802	P53309	568 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	CPR6	P53691	371 aa	Known RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	PKH1	Q03407	766 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	TRS130	Q03660	1102 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	TMA64	Q04600	565 aa	Known RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	YPS7	Q06325	596 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	THI22	Q06490	572 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	TY1B-DR4	Q07793	1604 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	PYC1	P11154	1178 aa	Known RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	KGD2	P19262	463 aa	Predicted RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	SIR1	P21691	654 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	TFC4	P33339	1025 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	TGL1	P34163	548 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	DEF1	P35732	738 aa	Known RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	YBR053C	P38235	358 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	PLB1	P39105	664 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	RPT2	P40327	437 aa	Known RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	RPN11	P43588	306 aa	Known RBP	1.69	□□□□□ -2.14
SMC4	YLR086W	BFA1	P47113	574 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	TAF4	P50105	388 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	MNT2	P53059	558 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	YHM2	Q04013	314 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	PEX19	Q07418	342 aa		1.69	□□□□□ -2.14
SMC4	YLR086W	SSN2	P38931	1420 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	MSS1	P32559	526 aa	Predicted RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	SER1	P33330	395 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	SAP190	P36123	1033 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	YKR075C	P36155	307 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	SHM2	P37291	469 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	RPP1	P38786	293 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	SAK1	P38990	1142 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	PXA1	P41909	870 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	DAS1	P47005	663 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	YDL183C	P48569	320 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	YMR210W	Q03649	449 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	IMH1	Q06704	911 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	WHI4	Q07655	649 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	NGL1	Q08213	363 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	TGL5	Q12043	749 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	HRP1	Q99383	534 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	TAF2	P23255	1407 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	ERG20	P08524	352 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	RNR1	P21524	888 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	CBF2	P32504	956 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	CDS1	P38221	457 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	PRM2	P40534	656 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	LSB3	P43603	459 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	ASK10	P48361	1146 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	UBC11	P52492	156 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	NRG1	Q03125	231 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	CLU1	Q03690	1277 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	YAP6	Q03935	383 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	VBA4	Q04602	768 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	GAD1	Q04792	585 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	ADY4	Q05955	493 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	ARR3	Q06598	404 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	YDL121C	Q07541	149 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	AAD4	Q07747	329 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	Q0142	Q9ZZW4	58 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	YCL049C	P25577	312 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	DGR2	P32330	852 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	HXT4	P32467	576 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	ETP1	P38748	585 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	NUP60	P39705	539 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	PHM8	P40025	321 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	FHN1	P53279	174 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	TEP1	P53916	434 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	USA1	Q03714	838 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	ECM16	Q04217	1267 aa	Known RBP	1.68	□□□□□ -2.14
SMC4	YLR086W	CHD1	P32657	1468 aa		1.68	□□□□□ -2.14
SMC4	YLR086W	PHO81	P17442	1178 aa		1.67	□□□□□ -2.14
SMC4	YLR086W	PMI40	P29952	429 aa	Known RBP	1.67	□□□□□ -2.14
SMC4	YLR086W	MSS4	P38994	779 aa		1.67	□□□□□ -2.14
SMC4	YLR086W	LYS9	P38999	446 aa		1.67	□□□□□ -2.14
SMC4	YLR086W	FMP52	P40008	231 aa		1.67	□□□□□ -2.14
SMC4	YLR086W	LRO1	P40345	661 aa		1.67	□□□□□ -2.14
SMC4	YLR086W	YNR071C	P53757	342 aa		1.67	□□□□□ -2.14
SMC4	YLR086W	DIA2	Q08496	732 aa	Predicted RBP	1.67	□□□□□ -2.14
SMC4	YLR086W	BMS1	Q08965	1183 aa	Known RBP	1.67	□□□□□ -2.14
SMC4	YLR086W	YOL114C	Q12322	202 aa		1.67	□□□□□ -2.14
SMC4	YLR086W	MPD2	Q99316	277 aa		1.67	□□□□□ -2.14
SMC4	YLR086W	VAS1	P07806	1104 aa	Known RBP	1.67	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms