RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C BUD6P41697 788 aa5.04□□□□□ -1.6
TVP38YKR088C FAA4P47912 694 aaKnown RBP5.04□□□□□ -1.6
TVP38YKR088C YKE2P52553 114 aa5.04□□□□□ -1.6
TVP38YKR088C VPS73P53142 486 aaKnown RBP5.04□□□□□ -1.6
TVP38YKR088C SML1Q04964 104 aa5.04□□□□□ -1.6
TVP38YKR088C ICT1Q12385 394 aa5.04□□□□□ -1.6
TVP38YKR088C OSM1P21375 501 aaKnown RBP5.03□□□□□ -1.6
TVP38YKR088C CLB1P24868 471 aa5.03□□□□□ -1.6
TVP38YKR088C PEP3P27801 918 aa5.03□□□□□ -1.6
TVP38YKR088C PSY4P38193 441 aa5.03□□□□□ -1.6
TVP38YKR088C YIL108WP40483 696 aaKnown RBP5.03□□□□□ -1.6
TVP38YKR088C TAH11P47112 604 aa5.03□□□□□ -1.6
TVP38YKR088C VPS64Q03944 604 aa5.03□□□□□ -1.6
TVP38YKR088C VMS1Q04311 632 aaKnown RBP5.03□□□□□ -1.6
TVP38YKR088C APL4Q12028 832 aa5.03□□□□□ -1.6
TVP38YKR088C YKL068W-AQ3E826 78 aa5.03□□□□□ -1.6
TVP38YKR088C YOL087CQ99247 1116 aa5.03□□□□□ -1.6
TVP38YKR088C RSF2P46974 1380 aa5.03□□□□□ -1.6
TVP38YKR088C RPL22AP05749 121 aaKnown RBP5.02□□□□□ -1.61
TVP38YKR088C TUB3P09734 445 aaKnown RBP5.02□□□□□ -1.61
TVP38YKR088C SBA1P28707 216 aaKnown RBP5.02□□□□□ -1.61
TVP38YKR088C MCM4P30665 933 aaKnown RBP5.02□□□□□ -1.61
TVP38YKR088C APL2P36000 726 aaPredicted RBP5.02□□□□□ -1.61
TVP38YKR088C PXL1P36166 706 aa5.02□□□□□ -1.61
TVP38YKR088C MED8P38304 223 aa5.02□□□□□ -1.61
TVP38YKR088C PCL5P38794 229 aa5.02□□□□□ -1.61
TVP38YKR088C ECM1P39715 212 aa5.02□□□□□ -1.61
TVP38YKR088C NOC2P39744 710 aaKnown RBP5.02□□□□□ -1.61
TVP38YKR088C FKH2P41813 862 aa5.02□□□□□ -1.61
TVP38YKR088C GUS1P46655 708 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
TVP38YKR088C MUP1P50276 574 aa5.02□□□□□ -1.61
TVP38YKR088C VPS75P53853 264 aa5.02□□□□□ -1.61
TVP38YKR088C ADE16P54113 591 aaKnown RBP5.02□□□□□ -1.61
TVP38YKR088C RMT2Q03305 412 aa5.02□□□□□ -1.61
TVP38YKR088C CRR1Q05790 422 aa5.02□□□□□ -1.61
TVP38YKR088C YCG1Q06680 1035 aa5.02□□□□□ -1.61
TVP38YKR088C LAM4P38800 1345 aa5.01□□□□□ -1.61
TVP38YKR088C YRF1-3P0CX14 1859 aa5.01□□□□□ -1.61
TVP38YKR088C YRF1-7P0CX15 1859 aa5.01□□□□□ -1.61
TVP38YKR088C YRF1-6P53819 1859 aa5.01□□□□□ -1.61
TVP38YKR088C PET123P17558 318 aa5.01□□□□□ -1.61
TVP38YKR088C SEC18P18759 758 aaKnown RBP5.01□□□□□ -1.61
TVP38YKR088C PHO13P19881 312 aa5.01□□□□□ -1.61
TVP38YKR088C RPD3P32561 433 aa5.01□□□□□ -1.61
TVP38YKR088C PCH2P38126 564 aa5.01□□□□□ -1.61
TVP38YKR088C RPP1P38786 293 aa5.01□□□□□ -1.61
TVP38YKR088C CTF8P38877 133 aa5.01□□□□□ -1.61
TVP38YKR088C VPS41P38959 992 aa5.01□□□□□ -1.61
TVP38YKR088C OSW7P43611 510 aa5.01□□□□□ -1.61
TVP38YKR088C RPN7Q06103 429 aaKnown RBP5.01□□□□□ -1.61
TVP38YKR088C TLG2Q08144 397 aa5.01□□□□□ -1.61
TVP38YKR088C SSP2Q08646 371 aa5.01□□□□□ -1.61
TVP38YKR088C TMA16Q08687 178 aa5.01□□□□□ -1.61
TVP38YKR088C ADE8P04161 214 aa5□□□□□ -1.61
TVP38YKR088C CBP3P21560 335 aa5□□□□□ -1.61
TVP38YKR088C UBC1P21734 215 aaKnown RBP5□□□□□ -1.61
TVP38YKR088C KIN3P22209 435 aa5□□□□□ -1.61
TVP38YKR088C AGP1P25376 633 aa5□□□□□ -1.61
TVP38YKR088C DPB3P27344 201 aa5□□□□□ -1.61
TVP38YKR088C CDC15P27636 974 aa5□□□□□ -1.61
TVP38YKR088C IMP2'P32351 346 aa5□□□□□ -1.61
TVP38YKR088C RRP1P35178 278 aaPredicted RBP5□□□□□ -1.61
TVP38YKR088C SKI2P35207 1287 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
TVP38YKR088C RTT107P38850 1070 aa5□□□□□ -1.61
TVP38YKR088C APT1P49435 187 aaKnown RBP5□□□□□ -1.61
TVP38YKR088C MAL13P53338 473 aa5□□□□□ -1.61
TVP38YKR088C UBP16Q02863 499 aa5□□□□□ -1.61
TVP38YKR088C GDE1Q02979 1223 aa5□□□□□ -1.61
TVP38YKR088C YMR102CQ03177 834 aa5□□□□□ -1.61
TVP38YKR088C FCP1Q03254 732 aa5□□□□□ -1.61
TVP38YKR088C GIN4Q12263 1142 aa5□□□□□ -1.61
TVP38YKR088C MET6P05694 767 aaKnown RBP4.99□□□□□ -1.61
TVP38YKR088C RFA1P22336 621 aaKnown RBP4.99□□□□□ -1.61
TVP38YKR088C YIL166CP40445 542 aa4.99□□□□□ -1.61
TVP38YKR088C EPL1P43572 832 aa4.99□□□□□ -1.61
TVP38YKR088C CUE3P53137 624 aaKnown RBP4.99□□□□□ -1.61
TVP38YKR088C YBP2P53169 641 aa4.99□□□□□ -1.61
TVP38YKR088C YNL193WP53870 558 aa4.99□□□□□ -1.61
TVP38YKR088C ALF1P53904 254 aa4.99□□□□□ -1.61
TVP38YKR088C GYL1Q04322 720 aa4.99□□□□□ -1.61
TVP38YKR088C SAC3P46674 1301 aa4.98□□□□□ -1.61
TVP38YKR088C SUP35P05453 685 aaKnown RBP4.98□□□□□ -1.61
TVP38YKR088C NPP1P25353 742 aa4.98□□□□□ -1.61
TVP38YKR088C YEL043WP32618 956 aa4.98□□□□□ -1.61
TVP38YKR088C TYE7P33122 291 aaPredicted RBP4.98□□□□□ -1.61
TVP38YKR088C FLO10P36170 1169 aa4.98□□□□□ -1.61
TVP38YKR088C YMR147WP40218 223 aaKnown RBP4.98□□□□□ -1.61
TVP38YKR088C YJL163CP46996 555 aa4.98□□□□□ -1.61
TVP38YKR088C CAF130P53280 1122 aaPredicted RBP4.98□□□□□ -1.61
TVP38YKR088C PKH1Q03407 766 aa4.98□□□□□ -1.61
TVP38YKR088C RRB1Q04225 511 aaKnown RBP4.98□□□□□ -1.61
TVP38YKR088C RBA50Q04418 439 aa4.98□□□□□ -1.61
TVP38YKR088C VPS38Q05919 439 aa4.98□□□□□ -1.61
TVP38YKR088C ARO10Q06408 635 aa4.98□□□□□ -1.61
TVP38YKR088C FAL1Q12099 399 aaKnown RBP4.98□□□□□ -1.61
TVP38YKR088C DCS2Q12123 353 aa4.98□□□□□ -1.61
TVP38YKR088C SSF2Q12153 453 aaPredicted RBP4.98□□□□□ -1.61
TVP38YKR088C FAS2P19097 1887 aaKnown RBP4.97□□□□□ -1.61
TVP38YKR088C HSP82P02829 709 aaKnown RBP4.97□□□□□ -1.61
TVP38YKR088C PFK2P16862 959 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms