RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeastyeast

Gene YPT35, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT35YHR105W YMR210WQ03649 449 aa4.47□□□□□ -1.69
YPT35YHR105W VPS36Q06696 566 aa4.47□□□□□ -1.69
YPT35YHR105W PEX19Q07418 342 aa4.47□□□□□ -1.69
YPT35YHR105W ERG6P25087 383 aaKnown RBP4.46□□□□□ -1.7
YPT35YHR105W MTC7P32633 139 aa4.46□□□□□ -1.7
YPT35YHR105W YHR112CP38716 378 aa4.46□□□□□ -1.7
YPT35YHR105W BUD8P41698 603 aa4.46□□□□□ -1.7
YPT35YHR105W BFA1P47113 574 aa4.46□□□□□ -1.7
YPT35YHR105W BUL1P48524 976 aa4.46□□□□□ -1.7
YPT35YHR105W PRP31P49704 494 aaPredicted RBP4.46□□□□□ -1.7
YPT35YHR105W HLR1Q04429 423 aa4.46□□□□□ -1.7
YPT35YHR105W RGC1Q06108 1083 aaKnown RBP4.46□□□□□ -1.7
YPT35YHR105W ISA1Q07821 250 aaPredicted RBP4.46□□□□□ -1.7
YPT35YHR105W SWM1Q12379 170 aa4.46□□□□□ -1.7
YPT35YHR105W NKP1Q12493 238 aa4.46□□□□□ -1.7
YPT35YHR105W PMA1P05030 918 aaKnown RBP4.45□□□□□ -1.7
YPT35YHR105W YEL076C-AP0CX16 216 aa4.45□□□□□ -1.7
YPT35YHR105W YLR464WP0CX17 216 aa4.45□□□□□ -1.7
YPT35YHR105W ACO1P19414 778 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
YPT35YHR105W PHO3P24031 467 aa4.45□□□□□ -1.7
YPT35YHR105W YEL076CP39971 216 aa4.45□□□□□ -1.7
YPT35YHR105W SCS2P40075 244 aaKnown RBP4.45□□□□□ -1.7
YPT35YHR105W IMA5P40884 581 aa4.45□□□□□ -1.7
YPT35YHR105W ASK10P48361 1146 aa4.45□□□□□ -1.7
YPT35YHR105W HIM1Q06674 414 aa4.45□□□□□ -1.7
YPT35YHR105W TGL5Q12043 749 aa4.45□□□□□ -1.7
YPT35YHR105W NTO1Q12311 748 aa4.45□□□□□ -1.7
YPT35YHR105W ADH4P10127 382 aa4.44□□□□□ -1.7
YPT35YHR105W FRS1P15624 595 aaKnown RBP4.44□□□□□ -1.7
YPT35YHR105W SEC18P18759 758 aaKnown RBP4.44□□□□□ -1.7
YPT35YHR105W MRS6P32864 603 aaKnown RBP4.44□□□□□ -1.7
YPT35YHR105W CTF13P35203 478 aa4.44□□□□□ -1.7
YPT35YHR105W APL2P36000 726 aaPredicted RBP4.44□□□□□ -1.7
YPT35YHR105W SRP68P38687 599 aaKnown RBP4.44□□□□□ -1.7
YPT35YHR105W DUN1P39009 513 aa4.44□□□□□ -1.7
YPT35YHR105W SPC72P39723 622 aa4.44□□□□□ -1.7
YPT35YHR105W STL1P39932 569 aa4.44□□□□□ -1.7
YPT35YHR105W MAD2P40958 196 aa4.44□□□□□ -1.7
YPT35YHR105W HOL1P53389 586 aa4.44□□□□□ -1.7
YPT35YHR105W URN1Q06525 465 aaKnown RBP4.44□□□□□ -1.7
YPT35YHR105W ENB1Q08299 606 aa4.44□□□□□ -1.7
YPT35YHR105W VHS3Q08438 674 aa4.44□□□□□ -1.7
YPT35YHR105W DIN7Q12086 430 aa4.44□□□□□ -1.7
YPT35YHR105W TRM13Q12383 476 aa4.44□□□□□ -1.7
YPT35YHR105W PNS1Q12412 539 aa4.44□□□□□ -1.7
YPT35YHR105W HRP1Q99383 534 aaKnown RBP4.44□□□□□ -1.7
YPT35YHR105W TCB3Q03640 1545 aaKnown RBP4.44□□□□□ -1.7
YPT35YHR105W PET309P32522 965 aaPredicted RBP4.43□□□□□ -1.7
YPT35YHR105W PET127P32606 800 aa4.43□□□□□ -1.7
YPT35YHR105W RPP1P38786 293 aa4.43□□□□□ -1.7
YPT35YHR105W LYS9P38999 446 aa4.43□□□□□ -1.7
YPT35YHR105W GET2P40056 285 aa4.43□□□□□ -1.7
YPT35YHR105W SAP185P40856 1058 aa4.43□□□□□ -1.7
YPT35YHR105W MAD3P47074 515 aa4.43□□□□□ -1.7
YPT35YHR105W MSE1P48525 536 aa4.43□□□□□ -1.7
YPT35YHR105W TEX1P53851 422 aaKnown RBP4.43□□□□□ -1.7
YPT35YHR105W TEP1P53916 434 aa4.43□□□□□ -1.7
YPT35YHR105W YML131WQ03102 365 aa4.43□□□□□ -1.7
YPT35YHR105W PKH1Q03407 766 aa4.43□□□□□ -1.7
YPT35YHR105W MCM21Q06675 368 aa4.43□□□□□ -1.7
YPT35YHR105W PUS9Q12069 462 aa4.43□□□□□ -1.7
YPT35YHR105W ARP7Q12406 477 aa4.43□□□□□ -1.7
YPT35YHR105W ECM3Q99252 613 aa4.43□□□□□ -1.7
YPT35YHR105W RNR1P21524 888 aaKnown RBP4.42□□□□□ -1.7
YPT35YHR105W RPA135P22138 1203 aaKnown RBP4.42□□□□□ -1.7
YPT35YHR105W DGR2P32330 852 aa4.42□□□□□ -1.7
YPT35YHR105W TGL1P34163 548 aa4.42□□□□□ -1.7
YPT35YHR105W NAB3P38996 802 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
YPT35YHR105W ECM1P39715 212 aa4.42□□□□□ -1.7
YPT35YHR105W VID27P40157 782 aa4.42□□□□□ -1.7
YPT35YHR105W NOP9P47077 666 aaKnown RBP4.42□□□□□ -1.7
YPT35YHR105W MNT2P53059 558 aa4.42□□□□□ -1.7
YPT35YHR105W TAN1P53072 289 aaPredicted RBP4.42□□□□□ -1.7
YPT35YHR105W NRG1Q03125 231 aa4.42□□□□□ -1.7
YPT35YHR105W PSF3Q12146 194 aa4.42□□□□□ -1.7
YPT35YHR105W TRM11Q12463 433 aa4.42□□□□□ -1.7
YPT35YHR105W DPB3P27344 201 aa4.41□□□□□ -1.7
YPT35YHR105W PMI40P29952 429 aaKnown RBP4.41□□□□□ -1.7
YPT35YHR105W PTH2P34222 208 aa4.41□□□□□ -1.7
YPT35YHR105W CDS1P38221 457 aa4.41□□□□□ -1.7
YPT35YHR105W YBR259WP38338 688 aa4.41□□□□□ -1.7
YPT35YHR105W SWD1P39706 426 aa4.41□□□□□ -1.7
YPT35YHR105W SAW1P39735 261 aa4.41□□□□□ -1.7
YPT35YHR105W FKH2P41813 862 aa4.41□□□□□ -1.7
YPT35YHR105W BIT61P47041 543 aa4.41□□□□□ -1.7
YPT35YHR105W TAF4P50105 388 aa4.41□□□□□ -1.7
YPT35YHR105W YBP2P53169 641 aa4.41□□□□□ -1.7
YPT35YHR105W PAP2P53632 584 aaKnown RBP4.41□□□□□ -1.7
YPT35YHR105W GTR1Q00582 310 aa4.41□□□□□ -1.7
YPT35YHR105W DBP10Q12389 995 aaKnown RBP4.41□□□□□ -1.7
YPT35YHR105W TRP4P07285 380 aaPredicted RBP4.4□□□□□ -1.71
YPT35YHR105W GFA1P14742 717 aaKnown RBP4.4□□□□□ -1.71
YPT35YHR105W PHO81P17442 1178 aa4.4□□□□□ -1.71
YPT35YHR105W MSM1P22438 575 aa4.4□□□□□ -1.71
YPT35YHR105W BEM3P32873 1128 aa4.4□□□□□ -1.71
YPT35YHR105W DEF1P35732 738 aaKnown RBP4.4□□□□□ -1.71
YPT35YHR105W RMA1P36001 430 aaKnown RBP4.4□□□□□ -1.71
YPT35YHR105W AIM21P40563 679 aa4.4□□□□□ -1.71
YPT35YHR105W YDL183CP48569 320 aa4.4□□□□□ -1.71
YPT35YHR105W MTL1P53214 551 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms