RNA–Protein interactions for RNA: YGR296W

YRF1-3, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-3, Length 5,580 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3YGR296W PNP1Q05788 311 aa8.24□□□□□ -1.09
YRF1-3YGR296W FAP7Q12055 197 aaPredicted RBP8.24□□□□□ -1.09
YRF1-3YGR296W YLL056CQ12177 298 aa8.24□□□□□ -1.09
YRF1-3YGR296W RPN5Q12250 445 aaKnown RBP8.24□□□□□ -1.09
YRF1-3YGR296W EMP46Q12396 444 aa8.24□□□□□ -1.09
YRF1-3YGR296W SPO11P23179 398 aa8.23□□□□□ -1.09
YRF1-3YGR296W DRE2P36152 348 aa8.23□□□□□ -1.09
YRF1-3YGR296W SCS2P40075 244 aaKnown RBP8.23□□□□□ -1.09
YRF1-3YGR296W BNI4P53858 892 aa8.23□□□□□ -1.09
YRF1-3YGR296W YLR053CQ12026 108 aa8.23□□□□□ -1.09
YRF1-3YGR296W SFL1P20134 766 aa8.23□□□□□ -1.09
YRF1-3YGR296W PLC1P32383 869 aa8.23□□□□□ -1.09
YRF1-3YGR296W HST2P53686 357 aa8.23□□□□□ -1.09
YRF1-3YGR296W PDC5P16467 563 aaKnown RBP8.23□□□□□ -1.09
YRF1-3YGR296W UTR4P32626 227 aa8.23□□□□□ -1.09
YRF1-3YGR296W KEL1P38853 1164 aaKnown RBP8.23□□□□□ -1.09
YRF1-3YGR296W CLA4P48562 842 aa8.23□□□□□ -1.09
YRF1-3YGR296W TRS130Q03660 1102 aa8.23□□□□□ -1.09
YRF1-3YGR296W CIR2Q08822 631 aa8.23□□□□□ -1.09
YRF1-3YGR296W YSC83P32792 385 aa8.23□□□□□ -1.09
YRF1-3YGR296W COS6P53344 381 aa8.23□□□□□ -1.09
YRF1-3YGR296W SUV3P32580 737 aa8.22□□□□□ -1.09
YRF1-3YGR296W ECM32P32644 1121 aaKnown RBP8.22□□□□□ -1.09
YRF1-3YGR296W BUD16P39988 312 aa8.22□□□□□ -1.09
YRF1-3YGR296W PTK2P47116 818 aaKnown RBP8.22□□□□□ -1.09
YRF1-3YGR296W PKH3Q03306 898 aaPredicted RBP8.22□□□□□ -1.09
YRF1-3YGR296W GAD1Q04792 585 aa8.22□□□□□ -1.09
YRF1-3YGR296W YOL075CQ08234 1294 aa8.22□□□□□ -1.09
YRF1-3YGR296W PRR1P28708 518 aa8.22□□□□□ -1.09
YRF1-3YGR296W PAN5P38787 379 aa8.22□□□□□ -1.09
YRF1-3YGR296W RBL2P48606 106 aaKnown RBP8.22□□□□□ -1.09
YRF1-3YGR296W CGR1P53188 120 aa8.22□□□□□ -1.09
YRF1-3YGR296W IST1P53843 298 aaPredicted RBP8.22□□□□□ -1.09
YRF1-3YGR296W ULP1Q02724 621 aa8.22□□□□□ -1.09
YRF1-3YGR296W PTC5Q12511 572 aa8.22□□□□□ -1.09
YRF1-3YGR296W PDR1P12383 1068 aa8.22□□□□□ -1.09
YRF1-3YGR296W COY1P34237 679 aa8.22□□□□□ -1.09
YRF1-3YGR296W EXO84P38261 753 aa8.22□□□□□ -1.09
YRF1-3YGR296W PEA2P40091 420 aa8.22□□□□□ -1.09
YRF1-3YGR296W MRPS18P42847 217 aa8.22□□□□□ -1.09
YRF1-3YGR296W EFM5P53200 248 aaKnown RBP8.22□□□□□ -1.09
YRF1-3YGR296W RPL6AQ02326 176 aaKnown RBP8.22□□□□□ -1.09
YRF1-3YGR296W KRE28Q04431 385 aa8.22□□□□□ -1.09
YRF1-3YGR296W DAL2P25335 343 aa8.22□□□□□ -1.09
YRF1-3YGR296W HUL4P40985 892 aa8.22□□□□□ -1.09
YRF1-3YGR296W NUT1P53114 1132 aa8.22□□□□□ -1.09
YRF1-3YGR296W BET4Q00618 327 aa8.22□□□□□ -1.09
YRF1-3YGR296W YMR111CQ04461 462 aaPredicted RBP8.22□□□□□ -1.09
YRF1-3YGR296W MCR1P36060 302 aaKnown RBP8.21□□□□□ -1.09
YRF1-3YGR296W HEK2P38199 381 aaKnown RBP RIP-Chip data8.21□□□□□ -1.09not detected
YRF1-3YGR296W NGG1P32494 702 aa8.21□□□□□ -1.09
YRF1-3YGR296W URA8P38627 578 aaPredicted RBP8.21□□□□□ -1.09
YRF1-3YGR296W TAF6P53040 516 aa8.21□□□□□ -1.09
YRF1-3YGR296W ERV41Q04651 352 aa8.21□□□□□ -1.09
YRF1-3YGR296W ARG4P04076 463 aaPredicted RBP8.21□□□□□ -1.1
YRF1-3YGR296W DBP3P20447 523 aaKnown RBP8.21□□□□□ -1.1
YRF1-3YGR296W SSP120P39931 234 aaKnown RBP8.21□□□□□ -1.1
YRF1-3YGR296W FIS1P40515 155 aa8.21□□□□□ -1.1
YRF1-3YGR296W MRM2P53123 320 aa8.21□□□□□ -1.1
YRF1-3YGR296W VPS5Q92331 675 aa8.21□□□□□ -1.1
YRF1-3YGR296W CIT2P08679 460 aa8.21□□□□□ -1.1
YRF1-3YGR296W SEC15P22224 910 aa8.21□□□□□ -1.1
YRF1-3YGR296W ATP7P30902 174 aa8.21□□□□□ -1.1
YRF1-3YGR296W GCD11P32481 527 aaKnown RBP8.21□□□□□ -1.1
YRF1-3YGR296W XDJ1P39102 459 aa8.21□□□□□ -1.1
YRF1-3YGR296W HEM2P05373 342 aa8.21□□□□□ -1.1
YRF1-3YGR296W YCL068CP25593 260 aa8.21□□□□□ -1.1
YRF1-3YGR296W PHO88P38264 188 aaPredicted RBP8.21□□□□□ -1.1
YRF1-3YGR296W MUB1Q03162 620 aa8.21□□□□□ -1.1
YRF1-3YGR296W SHE9Q04172 456 aa8.21□□□□□ -1.1
YRF1-3YGR296W PYC1P11154 1178 aaKnown RBP8.2□□□□□ -1.1
YRF1-3YGR296W SRV2P17555 526 aaKnown RBP8.2□□□□□ -1.1
YRF1-3YGR296W HSP60P19882 572 aaKnown RBP8.2□□□□□ -1.1
YRF1-3YGR296W STV1P37296 890 aa8.2□□□□□ -1.1
YRF1-3YGR296W TFB3Q03290 321 aa8.2□□□□□ -1.1
YRF1-3YGR296W YML083CQ04526 418 aa8.2□□□□□ -1.1
YRF1-3YGR296W DON1Q05610 365 aa8.2□□□□□ -1.1
YRF1-3YGR296W TGL5Q12043 749 aa8.2□□□□□ -1.1
YRF1-3YGR296W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
YRF1-3YGR296W SXM1Q04175 944 aaKnown RBP8.2□□□□□ -1.1
YRF1-3YGR296W TMA64Q04600 565 aaKnown RBP8.2□□□□□ -1.1
YRF1-3YGR296W PSY4P38193 441 aa8.2□□□□□ -1.1
YRF1-3YGR296W YHL050CP38721 697 aa8.2□□□□□ -1.1
YRF1-3YGR296W PPR1P07272 904 aaPredicted RBP8.2□□□□□ -1.1
YRF1-3YGR296W DIA4P38705 446 aaPredicted RBP8.2□□□□□ -1.1
YRF1-3YGR296W APE4P38821 490 aa8.2□□□□□ -1.1
YRF1-3YGR296W STN1P38960 494 aa8.2□□□□□ -1.1
YRF1-3YGR296W ARH1P48360 493 aa8.2□□□□□ -1.1
YRF1-3YGR296W DBP10Q12389 995 aaKnown RBP8.2□□□□□ -1.1
YRF1-3YGR296W SEC63P14906 663 aa8.19□□□□□ -1.1
YRF1-3YGR296W URA10P30402 227 aa8.19□□□□□ -1.1
YRF1-3YGR296W SRB2P34162 210 aa8.19□□□□□ -1.1
YRF1-3YGR296W CDC34P14682 295 aa8.19□□□□□ -1.1
YRF1-3YGR296W RRT12P25381 491 aa8.19□□□□□ -1.1
YRF1-3YGR296W MRPL40P36534 297 aa8.19□□□□□ -1.1
YRF1-3YGR296W VAC8P39968 578 aa8.19□□□□□ -1.1
YRF1-3YGR296W ABD1P32783 436 aaPredicted RBP8.19□□□□□ -1.1
YRF1-3YGR296W TGL4P36165 910 aa8.19□□□□□ -1.1
YRF1-3YGR296W PCA1P38360 1216 aa8.19□□□□□ -1.1
YRF1-3YGR296W SLX8P40072 274 aa8.19□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms