RNA–Protein interactions for RNA: YER103W

SSA4, Transcript of Heat shock protein that is highly induced upon stress, yeast

Gene SSA4, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA4	YER103W	PMS1	P14242	873 aa		13.22	□□□□□ -0.29
SSA4	YER103W	AEP2	P22136	580 aa		13.22	□□□□□ -0.29
SSA4	YER103W	PEX18	P38855	283 aa		13.22	□□□□□ -0.29
SSA4	YER103W	FRT2	P39734	528 aa		13.22	□□□□□ -0.29
SSA4	YER103W	ULP2	P40537	1034 aa	Predicted RBP	13.22	□□□□□ -0.29
SSA4	YER103W	LAM5	P43560	674 aa		13.22	□□□□□ -0.29
SSA4	YER103W	BIO4	P53630	237 aa		13.22	□□□□□ -0.29
SSA4	YER103W	RLP24	Q07915	199 aa	Known RBP	13.22	□□□□□ -0.29
SSA4	YER103W	PSF3	Q12146	194 aa		13.22	□□□□□ -0.29
SSA4	YER103W	FLO11	P08640	1367 aa		13.22	□□□□□ -0.29
SSA4	YER103W	PDC5	P16467	563 aa	Known RBP	13.21	□□□□□ -0.29
SSA4	YER103W	KRE2	P27809	442 aa		13.21	□□□□□ -0.29
SSA4	YER103W	STB2	P46679	850 aa		13.21	□□□□□ -0.29
SSA4	YER103W	NMA2	P53204	395 aa		13.21	□□□□□ -0.29
SSA4	YER103W	ADI1	Q03677	179 aa		13.21	□□□□□ -0.29
SSA4	YER103W	DIB1	Q06819	143 aa	Predicted RBP	13.21	□□□□□ -0.29
SSA4	YER103W	ILS1	P09436	1072 aa	Known RBP	13.21	□□□□□ -0.3
SSA4	YER103W	TUB1	P09733	447 aa	Known RBP	13.21	□□□□□ -0.3
SSA4	YER103W	PET122	P10355	254 aa		13.21	□□□□□ -0.3
SSA4	YER103W	BRL1	P38770	471 aa		13.21	□□□□□ -0.3
SSA4	YER103W	PCF11	P39081	626 aa	Predicted RBP	13.21	□□□□□ -0.3
SSA4	YER103W	CTR1	P49573	406 aa		13.21	□□□□□ -0.3
SSA4	YER103W	LSC1	P53598	329 aa	Known RBP	13.21	□□□□□ -0.3
SSA4	YER103W	TIM8	P57744	87 aa		13.21	□□□□□ -0.3
SSA4	YER103W	PLP1	Q04004	230 aa		13.21	□□□□□ -0.3
SSA4	YER103W	RPN8	Q08723	338 aa	Known RBP	13.21	□□□□□ -0.3
SSA4	YER103W	YDL206W	Q12424	762 aa		13.21	□□□□□ -0.3
SSA4	YER103W	MSD1	P15179	658 aa	Known RBP	13.2	□□□□□ -0.3
SSA4	YER103W	RGR1	P19263	1082 aa		13.2	□□□□□ -0.3
SSA4	YER103W	YSC84	P32793	468 aa		13.2	□□□□□ -0.3
SSA4	YER103W	TIF3	P34167	436 aa	Known RBP	13.2	□□□□□ -0.3
SSA4	YER103W	SPC42	P36094	363 aa		13.2	□□□□□ -0.3
SSA4	YER103W	PDX3	P38075	228 aa	Known RBP	13.2	□□□□□ -0.3
SSA4	YER103W	NPT1	P39683	429 aa	Known RBP	13.2	□□□□□ -0.3
SSA4	YER103W	YJL107C	P42947	387 aa		13.2	□□□□□ -0.3
SSA4	YER103W	BRE2	P43132	505 aa		13.2	□□□□□ -0.3
SSA4	YER103W	DAN4	P47179	1161 aa		13.2	□□□□□ -0.3
SSA4	YER103W	YML6	P51998	286 aa		13.2	□□□□□ -0.3
SSA4	YER103W	NOG2	P53742	486 aa	Known RBP	13.2	□□□□□ -0.3
SSA4	YER103W	BUD23	P25627	275 aa	Predicted RBP	13.19	□□□□□ -0.3
SSA4	YER103W	PGM2	P37012	569 aa	Known RBP	13.19	□□□□□ -0.3
SSA4	YER103W	MRM2	P53123	320 aa		13.19	□□□□□ -0.3
SSA4	YER103W	ASI2	P53895	289 aa		13.19	□□□□□ -0.3
SSA4	YER103W	MGR3	Q04472	501 aa		13.19	□□□□□ -0.3
SSA4	YER103W	RAD10	P06838	210 aa		13.19	□□□□□ -0.3
SSA4	YER103W	SUL1	P38359	859 aa		13.19	□□□□□ -0.3
SSA4	YER103W	VPS45	P38932	577 aa		13.19	□□□□□ -0.3
SSA4	YER103W	BNA3	P47039	444 aa	Known RBP	13.19	□□□□□ -0.3
SSA4	YER103W	YGR125W	P53273	1036 aa		13.19	□□□□□ -0.3
SSA4	YER103W	UTP8	P53276	713 aa	Known RBP	13.19	□□□□□ -0.3
SSA4	YER103W	SUE1	Q06524	206 aa		13.19	□□□□□ -0.3
SSA4	YER103W	FAP7	Q12055	197 aa	Predicted RBP	13.19	□□□□□ -0.3
SSA4	YER103W	YPR089W	O13585	888 aa		13.18	□□□□□ -0.3
SSA4	YER103W	PHO8	P11491	566 aa		13.18	□□□□□ -0.3
SSA4	YER103W	PTH2	P34222	208 aa		13.18	□□□□□ -0.3
SSA4	YER103W	ETR1	P38071	380 aa		13.18	□□□□□ -0.3
SSA4	YER103W	RGD2	P43556	714 aa		13.18	□□□□□ -0.3
SSA4	YER103W	CLA4	P48562	842 aa		13.18	□□□□□ -0.3
SSA4	YER103W	IMD4	P50094	524 aa	Known RBP	13.18	□□□□□ -0.3
SSA4	YER103W	NUT1	P53114	1132 aa		13.18	□□□□□ -0.3
SSA4	YER103W	DSL1	P53847	754 aa		13.18	□□□□□ -0.3
SSA4	YER103W	CDC73	Q06697	393 aa		13.18	□□□□□ -0.3
SSA4	YER103W	SLX4	Q12098	748 aa		13.18	□□□□□ -0.3
SSA4	YER103W	MUD1	P32605	298 aa	Known RBP	13.17	□□□□□ -0.3
SSA4	YER103W	PMC1	P38929	1173 aa	Predicted RBP	13.17	□□□□□ -0.3
SSA4	YER103W	FTR1	P40088	404 aa		13.17	□□□□□ -0.3
SSA4	YER103W	SAE2	P46946	345 aa		13.17	□□□□□ -0.3
SSA4	YER103W	CIK1	Q01649	594 aa		13.17	□□□□□ -0.3
SSA4	YER103W	WRS1	Q12109	432 aa	Known RBP	13.17	□□□□□ -0.3
SSA4	YER103W	GPM3	Q12326	303 aa		13.17	□□□□□ -0.3
SSA4	YER103W	RKM4	Q12504	494 aa		13.17	□□□□□ -0.3
SSA4	YER103W	PMD1	P32634	1753 aa		13.17	□□□□□ -0.3
SSA4	YER103W	IRE1	P32361	1115 aa		13.17	□□□□□ -0.3
SSA4	YER103W	SAH1	P39954	449 aa	Known RBP	13.17	□□□□□ -0.3
SSA4	YER103W	MKT1	P40850	830 aa	Known RBP	13.17	□□□□□ -0.3
SSA4	YER103W	FMP32	P43557	207 aa		13.17	□□□□□ -0.3
SSA4	YER103W	BUD22	Q04347	519 aa	Known RBP	13.17	□□□□□ -0.3
SSA4	YER103W	ATG11	Q12527	1178 aa		13.17	□□□□□ -0.3
SSA4	YER103W	TUB3	P09734	445 aa	Known RBP	13.16	□□□□□ -0.3
SSA4	YER103W	SRM1	P21827	482 aa		13.16	□□□□□ -0.3
SSA4	YER103W	GFD2	P25370	566 aa	Known RBP	13.16	□□□□□ -0.3
SSA4	YER103W	CSE1	P33307	960 aa		13.16	□□□□□ -0.3
SSA4	YER103W	MSR1	P38714	643 aa		13.16	□□□□□ -0.3
SSA4	YER103W	RIC1	P40395	1056 aa		13.16	□□□□□ -0.3
SSA4	YER103W	ADE12	P80210	433 aa	Known RBP	13.16	□□□□□ -0.3
SSA4	YER103W	SRL4	Q03085	281 aa		13.16	□□□□□ -0.3
SSA4	YER103W	CWC15	Q03772	175 aa	Known RBP	13.16	□□□□□ -0.3
SSA4	YER103W	ADE13	Q05911	482 aa	Known RBP	13.16	□□□□□ -0.3
SSA4	YER103W	YET3	Q07451	203 aa		13.16	□□□□□ -0.3
SSA4	YER103W	GPR1	Q12361	961 aa		13.16	□□□□□ -0.3
SSA4	YER103W	ADF1	Q2V2Q1	113 aa		13.16	□□□□□ -0.3
SSA4	YER103W	VPS34	P22543	875 aa		13.15	□□□□□ -0.3
SSA4	YER103W	URE2	P23202	354 aa	Known RBP	13.15	□□□□□ -0.3
SSA4	YER103W	TFC1	P32367	649 aa		13.15	□□□□□ -0.3
SSA4	YER103W	PCA1	P38360	1216 aa		13.15	□□□□□ -0.3
SSA4	YER103W	PAN5	P38787	379 aa		13.15	□□□□□ -0.3
SSA4	YER103W	PES4	P39684	611 aa		13.15	□□□□□ -0.3
SSA4	YER103W	SNL1	P40548	159 aa		13.15	□□□□□ -0.3
SSA4	YER103W	AIM21	P40563	679 aa		13.15	□□□□□ -0.3
SSA4	YER103W	NUP84	P52891	726 aa		13.15	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms