RNA–Protein interactions for RNA: YDR357C

CNL1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene CNL1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNL1YDR357C YPQ2Q06328 317 aa5.04□□□□□ -1.6
CNL1YDR357C HMI1Q12039 706 aa5.04□□□□□ -1.6
CNL1YDR357C RVB2Q12464 471 aaKnown RBP5.04□□□□□ -1.6
CNL1YDR357C SKS1Q12505 502 aa5.04□□□□□ -1.6
CNL1YDR357C SEC39Q12745 709 aa5.04□□□□□ -1.6
CNL1YDR357C PGA3Q12746 312 aaKnown RBP5.04□□□□□ -1.6
CNL1YDR357C TCB3Q03640 1545 aaKnown RBP5.03□□□□□ -1.6
CNL1YDR357C FUM1P08417 488 aaKnown RBP5.03□□□□□ -1.6
CNL1YDR357C HOP1P20050 605 aa5.03□□□□□ -1.6
CNL1YDR357C ROX1P25042 368 aa5.03□□□□□ -1.6
CNL1YDR357C RRP43P25359 394 aaPredicted RBP5.03□□□□□ -1.6
CNL1YDR357C YKL107WP34251 309 aa5.03□□□□□ -1.6
CNL1YDR357C TEF4P36008 412 aaKnown RBP5.03□□□□□ -1.6
CNL1YDR357C YKT6P36015 200 aaKnown RBP5.03□□□□□ -1.6
CNL1YDR357C PAN5P38787 379 aa5.03□□□□□ -1.6
CNL1YDR357C PEX28P38848 579 aa5.03□□□□□ -1.6
CNL1YDR357C SKN7P38889 622 aa5.03□□□□□ -1.6
CNL1YDR357C YMR124WP39523 943 aaKnown RBP5.03□□□□□ -1.6
CNL1YDR357C YJL070CP40361 888 aa5.03□□□□□ -1.6
CNL1YDR357C UTP18P40362 594 aaPredicted RBP5.03□□□□□ -1.6
CNL1YDR357C CCT5P40413 562 aaKnown RBP5.03□□□□□ -1.6
CNL1YDR357C LCB2P40970 561 aa5.03□□□□□ -1.6
CNL1YDR357C CAF16P43569 289 aa5.03□□□□□ -1.6
CNL1YDR357C GYP8P43570 497 aa5.03□□□□□ -1.6
CNL1YDR357C ART5P53244 586 aaKnown RBP5.03□□□□□ -1.6
CNL1YDR357C LSC1P53598 329 aaKnown RBP5.03□□□□□ -1.6
CNL1YDR357C YNR061CP53747 219 aa5.03□□□□□ -1.6
CNL1YDR357C YML119WQ03208 357 aa5.03□□□□□ -1.6
CNL1YDR357C HLR1Q04429 423 aa5.03□□□□□ -1.6
CNL1YDR357C MGR3Q04472 501 aa5.03□□□□□ -1.6
CNL1YDR357C ECM38Q05902 660 aaPredicted RBP5.03□□□□□ -1.6
CNL1YDR357C GGA1Q06336 557 aa5.03□□□□□ -1.6
CNL1YDR357C HDA2Q06629 674 aa5.03□□□□□ -1.6
CNL1YDR357C PMT7Q06644 662 aa5.03□□□□□ -1.6
CNL1YDR357C CSR1Q06705 408 aaKnown RBP5.03□□□□□ -1.6
CNL1YDR357C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
CNL1YDR357C MDY2Q12285 212 aa5.03□□□□□ -1.6
CNL1YDR357C TIF6Q12522 245 aaKnown RBP5.03□□□□□ -1.6
CNL1YDR357C MET17P06106 444 aa5.02□□□□□ -1.61
CNL1YDR357C SNF1P06782 633 aaKnown RBP5.02□□□□□ -1.61
CNL1YDR357C KSS1P14681 368 aa5.02□□□□□ -1.61
CNL1YDR357C SEC23P15303 768 aaKnown RBP5.02□□□□□ -1.61
CNL1YDR357C PUT4P15380 627 aa5.02□□□□□ -1.61
CNL1YDR357C HCA4P20448 770 aaKnown RBP5.02□□□□□ -1.61
CNL1YDR357C RRP7P25368 297 aaPredicted RBP5.02□□□□□ -1.61
CNL1YDR357C GYP6P32806 458 aa5.02□□□□□ -1.61
CNL1YDR357C PET10P36139 283 aa5.02□□□□□ -1.61
CNL1YDR357C PIH1P38768 344 aa5.02□□□□□ -1.61
CNL1YDR357C AXL2P38928 823 aa5.02□□□□□ -1.61
CNL1YDR357C UME6P39001 836 aa5.02□□□□□ -1.61
CNL1YDR357C SWD1P39706 426 aa5.02□□□□□ -1.61
CNL1YDR357C SAW1P39735 261 aa5.02□□□□□ -1.61
CNL1YDR357C AIM10P39965 576 aaKnown RBP5.02□□□□□ -1.61
CNL1YDR357C ATF1P40353 525 aa5.02□□□□□ -1.61
CNL1YDR357C RGD2P43556 714 aa5.02□□□□□ -1.61
CNL1YDR357C BPL1P48445 690 aaPredicted RBP5.02□□□□□ -1.61
CNL1YDR357C SHE4P51534 789 aa5.02□□□□□ -1.61
CNL1YDR357C VID30P53076 958 aa5.02□□□□□ -1.61
CNL1YDR357C RPN14P53196 417 aa5.02□□□□□ -1.61
CNL1YDR357C YGR266WP53326 701 aa5.02□□□□□ -1.61
CNL1YDR357C DSL1P53847 754 aa5.02□□□□□ -1.61
CNL1YDR357C ARP5P53946 755 aa5.02□□□□□ -1.61
CNL1YDR357C RPT6Q01939 405 aaKnown RBP5.02□□□□□ -1.61
CNL1YDR357C ECM9Q02202 377 aa5.02□□□□□ -1.61
CNL1YDR357C OAZ1Q02803 292 aa5.02□□□□□ -1.61
CNL1YDR357C YPL107WQ02873 248 aa5.02□□□□□ -1.61
CNL1YDR357C GYL1Q04322 720 aa5.02□□□□□ -1.61
CNL1YDR357C VID22Q05934 901 aa5.02□□□□□ -1.61
CNL1YDR357C YLR345WQ06137 509 aa5.02□□□□□ -1.61
CNL1YDR357C TDA6Q06466 467 aa5.02□□□□□ -1.61
CNL1YDR357C TSR1Q07381 788 aaKnown RBP5.02□□□□□ -1.61
CNL1YDR357C RTC5Q12108 567 aaKnown RBP5.02□□□□□ -1.61
CNL1YDR357C ECM5Q03214 1411 aa5.01□□□□□ -1.61
CNL1YDR357C GCN4P03069 281 aa5.01□□□□□ -1.61
CNL1YDR357C ARG3P05150 338 aa5.01□□□□□ -1.61
CNL1YDR357C MTF2P10849 440 aa5.01□□□□□ -1.61
CNL1YDR357C HSF1P10961 833 aa5.01□□□□□ -1.61
CNL1YDR357C MSD1P15179 658 aaKnown RBP5.01□□□□□ -1.61
CNL1YDR357C YCK2P23292 546 aaKnown RBP5.01□□□□□ -1.61
CNL1YDR357C SGF29P25554 259 aa5.01□□□□□ -1.61
CNL1YDR357C POT1P27796 417 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
CNL1YDR357C AAR2P32357 355 aaPredicted RBP5.01□□□□□ -1.61
CNL1YDR357C DPH5P32469 300 aaPredicted RBP5.01□□□□□ -1.61
CNL1YDR357C AFR1P33304 620 aa5.01□□□□□ -1.61
CNL1YDR357C YUH1P35127 236 aa5.01□□□□□ -1.61
CNL1YDR357C APE3P37302 537 aaKnown RBP5.01□□□□□ -1.61
CNL1YDR357C GND1P38720 489 aaKnown RBP5.01□□□□□ -1.61
CNL1YDR357C TDA3P38758 523 aa5.01□□□□□ -1.61
CNL1YDR357C DYS1P38791 387 aa5.01□□□□□ -1.61
CNL1YDR357C NPR2P39923 615 aa5.01□□□□□ -1.61
CNL1YDR357C HXT13P39924 564 aa5.01□□□□□ -1.61
CNL1YDR357C YGL176CP46945 554 aa5.01□□□□□ -1.61
CNL1YDR357C BNA2P47125 453 aa5.01□□□□□ -1.61
CNL1YDR357C TRF5P48561 642 aaKnown RBP5.01□□□□□ -1.61
CNL1YDR357C GCV2P49095 1034 aa5.01□□□□□ -1.61
CNL1YDR357C VPS4P52917 437 aa5.01□□□□□ -1.61
CNL1YDR357C ARE2P53629 642 aaKnown RBP5.01□□□□□ -1.61
CNL1YDR357C HXT17P53631 564 aa5.01□□□□□ -1.61
CNL1YDR357C MOT3P54785 490 aaKnown RBP5.01□□□□□ -1.61
CNL1YDR357C HXT15P54854 567 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms