RNA–Protein interactions for RNA: YDR330W

UBX5, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX5, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX5YDR330W RPS21BQ3E754 87 aaKnown RBP4.48□□□□□ -1.69
UBX5YDR330W CMP2P14747 604 aa4.47□□□□□ -1.69
UBX5YDR330W DAL5P15365 543 aa4.47□□□□□ -1.69
UBX5YDR330W PFK1P16861 987 aaKnown RBP4.47□□□□□ -1.69
UBX5YDR330W SSZ1P38788 538 aaKnown RBP4.47□□□□□ -1.69
UBX5YDR330W YJR039WP47107 1121 aa4.47□□□□□ -1.69
UBX5YDR330W YPL034WQ03083 165 aa4.47□□□□□ -1.69
UBX5YDR330W NKP1Q12493 238 aa4.47□□□□□ -1.69
UBX5YDR330W SPE1P08432 466 aa4.46□□□□□ -1.69
UBX5YDR330W FBP1P09201 348 aa4.46□□□□□ -1.69
UBX5YDR330W SER1P33330 395 aaKnown RBP4.46□□□□□ -1.69
UBX5YDR330W YHR078WP38799 552 aa4.46□□□□□ -1.69
UBX5YDR330W RRP8P38961 392 aaKnown RBP4.46□□□□□ -1.69
UBX5YDR330W HIS6P40545 261 aa4.46□□□□□ -1.69
UBX5YDR330W SSY5P47002 699 aa4.46□□□□□ -1.69
UBX5YDR330W YGR130CP53278 816 aa4.46□□□□□ -1.69
UBX5YDR330W HOL1P53389 586 aa4.46□□□□□ -1.69
UBX5YDR330W GCD1P09032 578 aaPredicted RBP4.46□□□□□ -1.7
UBX5YDR330W PRP45P28004 379 aaPredicted RBP4.46□□□□□ -1.7
UBX5YDR330W YKL222CP35995 705 aa4.46□□□□□ -1.7
UBX5YDR330W MAM1P40065 302 aa4.46□□□□□ -1.7
UBX5YDR330W MND2P40577 368 aa4.46□□□□□ -1.7
UBX5YDR330W MTR3P48240 250 aaPredicted RBP4.46□□□□□ -1.7
UBX5YDR330W CNM67P53865 581 aaKnown RBP4.46□□□□□ -1.7
UBX5YDR330W ORC4P54791 529 aa4.46□□□□□ -1.7
UBX5YDR330W TMA64Q04600 565 aaKnown RBP4.46□□□□□ -1.7
UBX5YDR330W ECM38Q05902 660 aaPredicted RBP4.46□□□□□ -1.7
UBX5YDR330W PSR2Q07949 397 aa4.46□□□□□ -1.7
UBX5YDR330W SLM3Q12093 417 aa4.46□□□□□ -1.7
UBX5YDR330W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
UBX5YDR330W CYC1P00044 109 aaPredicted RBP4.45□□□□□ -1.7
UBX5YDR330W CYC7P00045 113 aa4.45□□□□□ -1.7
UBX5YDR330W SWI6P09959 803 aa4.45□□□□□ -1.7
UBX5YDR330W PHO81P17442 1178 aa4.45□□□□□ -1.7
UBX5YDR330W HSP104P31539 908 aaKnown RBP4.45□□□□□ -1.7
UBX5YDR330W YHL041WP38730 149 aa4.45□□□□□ -1.7
UBX5YDR330W MIP6P38760 659 aaKnown RBP4.45□□□□□ -1.7
UBX5YDR330W CTF8P38877 133 aa4.45□□□□□ -1.7
UBX5YDR330W SKN7P38889 622 aa4.45□□□□□ -1.7
UBX5YDR330W PZF1P39933 429 aa4.45□□□□□ -1.7
UBX5YDR330W SDP1P40479 209 aa4.45□□□□□ -1.7
UBX5YDR330W CTF4Q01454 927 aa4.45□□□□□ -1.7
UBX5YDR330W MCA1Q08601 432 aa4.45□□□□□ -1.7
UBX5YDR330W YOR352WQ08816 343 aa4.45□□□□□ -1.7
UBX5YDR330W LPX1Q12405 387 aaKnown RBP4.45□□□□□ -1.7
UBX5YDR330W GAL10P04397 699 aa4.44□□□□□ -1.7
UBX5YDR330W FAT1P38225 669 aa4.44□□□□□ -1.7
UBX5YDR330W YBP2P53169 641 aa4.44□□□□□ -1.7
UBX5YDR330W ORC3P54790 616 aa4.44□□□□□ -1.7
UBX5YDR330W ARP4P80428 489 aa4.44□□□□□ -1.7
UBX5YDR330W EDE1P34216 1381 aa4.43□□□□□ -1.7
UBX5YDR330W SED4P25365 1065 aa4.43□□□□□ -1.7
UBX5YDR330W SAK1P38990 1142 aa4.43□□□□□ -1.7
UBX5YDR330W BEM4P39011 633 aa4.43□□□□□ -1.7
UBX5YDR330W SAW1P39735 261 aa4.43□□□□□ -1.7
UBX5YDR330W BRE5P53741 515 aaKnown RBP4.43□□□□□ -1.7
UBX5YDR330W YMR210WQ03649 449 aa4.43□□□□□ -1.7
UBX5YDR330W TPO1Q07824 586 aa4.43□□□□□ -1.7
UBX5YDR330W NGG1P32494 702 aa4.42□□□□□ -1.7
UBX5YDR330W APN2P38207 520 aa4.42□□□□□ -1.7
UBX5YDR330W SRP68P38687 599 aaKnown RBP4.42□□□□□ -1.7
UBX5YDR330W YHR202WP38887 602 aa4.42□□□□□ -1.7
UBX5YDR330W SAP185P40856 1058 aa4.42□□□□□ -1.7
UBX5YDR330W QRI7P43122 407 aa4.42□□□□□ -1.7
UBX5YDR330W YFR016CP43597 1233 aaKnown RBP4.42□□□□□ -1.7
UBX5YDR330W SET2P46995 733 aaKnown RBP4.42□□□□□ -1.7
UBX5YDR330W YLR407WQ06070 228 aa4.42□□□□□ -1.7
UBX5YDR330W BMS1Q08965 1183 aaKnown RBP4.42□□□□□ -1.7
UBX5YDR330W GLN4P13188 809 aaKnown RBP4.41□□□□□ -1.7
UBX5YDR330W HOP1P20050 605 aa4.41□□□□□ -1.7
UBX5YDR330W ATP12P22135 325 aa4.41□□□□□ -1.7
UBX5YDR330W DBF20P32328 564 aa4.41□□□□□ -1.7
UBX5YDR330W SDS22P36047 338 aa4.41□□□□□ -1.7
UBX5YDR330W KTR4P38131 464 aa4.41□□□□□ -1.7
UBX5YDR330W OPY1P38271 328 aa4.41□□□□□ -1.7
UBX5YDR330W ACA1P39970 489 aa4.41□□□□□ -1.7
UBX5YDR330W ICP55P40051 511 aa4.41□□□□□ -1.7
UBX5YDR330W VID28P40547 921 aa4.41□□□□□ -1.7
UBX5YDR330W URM1P40554 99 aaPredicted RBP4.41□□□□□ -1.7
UBX5YDR330W YIR014WP40570 242 aa4.41□□□□□ -1.7
UBX5YDR330W MET12P46151 657 aa4.41□□□□□ -1.7
UBX5YDR330W ENP2P48234 707 aaKnown RBP4.41□□□□□ -1.7
UBX5YDR330W ASK10P48361 1146 aa4.41□□□□□ -1.7
UBX5YDR330W NOP15P53927 220 aaPredicted RBP4.41□□□□□ -1.7
UBX5YDR330W ADY3Q07732 790 aa4.41□□□□□ -1.7
UBX5YDR330W YOL114CQ12322 202 aa4.41□□□□□ -1.7
UBX5YDR330W YRF1-3P0CX14 1859 aa4.41□□□□□ -1.7
UBX5YDR330W YRF1-7P0CX15 1859 aa4.41□□□□□ -1.7
UBX5YDR330W YRF1-6P53819 1859 aa4.41□□□□□ -1.7
UBX5YDR330W RPS17AP02407 136 aaKnown RBP4.41□□□□□ -1.7
UBX5YDR330W MSS18P08593 268 aa4.41□□□□□ -1.7
UBX5YDR330W RPS17BP14127 136 aaKnown RBP4.41□□□□□ -1.7
UBX5YDR330W DGR2P32330 852 aa4.41□□□□□ -1.7
UBX5YDR330W SSH4P32343 579 aa4.41□□□□□ -1.7
UBX5YDR330W ETP1P38748 585 aaKnown RBP4.41□□□□□ -1.7
UBX5YDR330W DUN1P39009 513 aa4.41□□□□□ -1.7
UBX5YDR330W GTF1P53260 183 aaPredicted RBP4.41□□□□□ -1.7
UBX5YDR330W PKH1Q03407 766 aa4.41□□□□□ -1.7
UBX5YDR330W OMS1Q06668 471 aa4.41□□□□□ -1.7
UBX5YDR330W WHI4Q07655 649 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms