RNA–Protein interactions for RNA: YDR220C

YDR220C, Transcript of Dubious open reading frame, yeast

Gene YDR220C, Length 294 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR220C	YDR220C	SNF12	P53628	566 aa		4.64	□□□□□ -1.67
YDR220C	YDR220C	ISA1	Q07821	250 aa	Predicted RBP	4.64	□□□□□ -1.67
YDR220C	YDR220C	MDM20	Q12387	796 aa	Known RBP	4.64	□□□□□ -1.67
YDR220C	YDR220C	DIP5	P53388	608 aa		4.63	□□□□□ -1.67
YDR220C	YDR220C	YDR179W-A	Q03983	463 aa		4.63	□□□□□ -1.67
YDR220C	YDR220C	YSH1	Q06224	779 aa	Predicted RBP	4.63	□□□□□ -1.67
YDR220C	YDR220C	TPK2	P06245	380 aa		4.62	□□□□□ -1.67
YDR220C	YDR220C	CIT2	P08679	460 aa		4.62	□□□□□ -1.67
YDR220C	YDR220C	GSY1	P23337	708 aa		4.62	□□□□□ -1.67
YDR220C	YDR220C	AKL1	P38080	1108 aa	Known RBP	4.62	□□□□□ -1.67
YDR220C	YDR220C	CIR2	Q08822	631 aa		4.62	□□□□□ -1.67
YDR220C	YDR220C	HMG1	P12683	1054 aa		4.61	□□□□□ -1.67
YDR220C	YDR220C	APL3	P38065	1025 aa		4.61	□□□□□ -1.67
YDR220C	YDR220C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
YDR220C	YDR220C	COS111	P38308	924 aa		4.61	□□□□□ -1.67
YDR220C	YDR220C	BPL1	P48445	690 aa	Predicted RBP	4.61	□□□□□ -1.67
YDR220C	YDR220C	PIP2	P52960	996 aa		4.61	□□□□□ -1.67
YDR220C	YDR220C	MPS1	P54199	764 aa		4.61	□□□□□ -1.67
YDR220C	YDR220C	ARG7	Q04728	441 aa		4.61	□□□□□ -1.67
YDR220C	YDR220C	YFT2	Q06676	274 aa		4.61	□□□□□ -1.67
YDR220C	YDR220C	DCS2	Q12123	353 aa		4.61	□□□□□ -1.67
YDR220C	YDR220C	POM34	Q12445	299 aa		4.61	□□□□□ -1.67
YDR220C	YDR220C	YOR131C	Q12486	218 aa		4.61	□□□□□ -1.67
YDR220C	YDR220C	YPT7	P32939	208 aa		4.6	□□□□□ -1.67
YDR220C	YDR220C	ELF1	P36053	145 aa		4.6	□□□□□ -1.67
YDR220C	YDR220C	HOT13	P36078	116 aa		4.6	□□□□□ -1.67
YDR220C	YDR220C	YHR202W	P38887	602 aa		4.6	□□□□□ -1.67
YDR220C	YDR220C	DOT6	P40059	670 aa	Known RBP	4.6	□□□□□ -1.67
YDR220C	YDR220C	CCT5	P40413	562 aa	Known RBP	4.6	□□□□□ -1.67
YDR220C	YDR220C	ATG33	Q06485	197 aa		4.6	□□□□□ -1.67
YDR220C	YDR220C	NUG1	P40010	520 aa	Known RBP	4.59	□□□□□ -1.67
YDR220C	YDR220C	YOL098C	Q12496	1037 aa		4.59	□□□□□ -1.67
YDR220C	YDR220C	AI5_ALPHA	Q9ZZX1	630 aa		4.59	□□□□□ -1.67
YDR220C	YDR220C	AAD3	P25612	363 aa		4.58	□□□□□ -1.68
YDR220C	YDR220C	PCL2	P25693	308 aa		4.58	□□□□□ -1.68
YDR220C	YDR220C	BUD6	P41697	788 aa		4.58	□□□□□ -1.68
YDR220C	YDR220C	BIT61	P47041	543 aa		4.58	□□□□□ -1.68
YDR220C	YDR220C	YJR039W	P47107	1121 aa		4.58	□□□□□ -1.68
YDR220C	YDR220C	UFO1	Q04511	668 aa		4.58	□□□□□ -1.68
YDR220C	YDR220C	TDA9	Q04545	1251 aa		4.58	□□□□□ -1.68
YDR220C	YDR220C	GEP3	Q08622	556 aa		4.58	□□□□□ -1.68
YDR220C	YDR220C	ERG20	P08524	352 aa	Known RBP	4.57	□□□□□ -1.68
YDR220C	YDR220C	STE4	P18851	423 aa		4.57	□□□□□ -1.68
YDR220C	YDR220C	SRP40	P32583	406 aa	Predicted RBP	4.57	□□□□□ -1.68
YDR220C	YDR220C	NUP82	P40368	713 aa		4.57	□□□□□ -1.68
YDR220C	YDR220C	NNF1	P47149	201 aa		4.57	□□□□□ -1.68
YDR220C	YDR220C	YGL117W	P53133	265 aa		4.57	□□□□□ -1.68
YDR220C	YDR220C	STP1	Q00947	519 aa		4.57	□□□□□ -1.68
YDR220C	YDR220C	RCR2	Q03446	210 aa	Known RBP	4.57	□□□□□ -1.68
YDR220C	YDR220C	RPN4	Q03465	531 aa		4.57	□□□□□ -1.68
YDR220C	YDR220C	IZH3	Q07959	543 aa		4.57	□□□□□ -1.68
YDR220C	YDR220C	LEU2	P04173	364 aa	Predicted RBP	4.56	□□□□□ -1.68
YDR220C	YDR220C	IMG2	P25642	146 aa	Predicted RBP	4.56	□□□□□ -1.68
YDR220C	YDR220C	NTH1	P32356	751 aa		4.56	□□□□□ -1.68
YDR220C	YDR220C	YKL091C	P33324	310 aa	Known RBP	4.56	□□□□□ -1.68
YDR220C	YDR220C	PCM1	P38628	557 aa	Known RBP	4.56	□□□□□ -1.68
YDR220C	YDR220C	NGL2	Q03264	515 aa	Known RBP	4.56	□□□□□ -1.68
YDR220C	YDR220C	VHS3	Q08438	674 aa		4.56	□□□□□ -1.68
YDR220C	YDR220C	FRE7	Q12333	620 aa		4.56	□□□□□ -1.68
YDR220C	YDR220C	FRS1	P15624	595 aa	Known RBP	4.55	□□□□□ -1.68
YDR220C	YDR220C	YUR1	P26725	428 aa		4.55	□□□□□ -1.68
YDR220C	YDR220C	YEL1	P34225	687 aa		4.55	□□□□□ -1.68
YDR220C	YDR220C	ULP2	P40537	1034 aa	Predicted RBP	4.55	□□□□□ -1.68
YDR220C	YDR220C	TRS23	Q03784	219 aa		4.55	□□□□□ -1.68
YDR220C	YDR220C	MSH2	P25847	964 aa		4.54	□□□□□ -1.68
YDR220C	YDR220C	GIN4	Q12263	1142 aa		4.54	□□□□□ -1.68
YDR220C	YDR220C	RPS9B	P05755	195 aa	Known RBP	4.53	□□□□□ -1.68
YDR220C	YDR220C	SFL1	P20134	766 aa		4.53	□□□□□ -1.68
YDR220C	YDR220C	PEX6	P33760	1030 aa		4.53	□□□□□ -1.68
YDR220C	YDR220C	PHO8	P11491	566 aa		4.52	□□□□□ -1.69
YDR220C	YDR220C	SEC15	P22224	910 aa		4.52	□□□□□ -1.69
YDR220C	YDR220C	KIN82	P25341	720 aa		4.52	□□□□□ -1.69
YDR220C	YDR220C	PET127	P32606	800 aa		4.52	□□□□□ -1.69
YDR220C	YDR220C	BEM4	P39011	633 aa		4.52	□□□□□ -1.69
YDR220C	YDR220C	CPR8	P53728	308 aa		4.52	□□□□□ -1.69
YDR220C	YDR220C	YLR125W	Q12138	136 aa		4.52	□□□□□ -1.69
YDR220C	YDR220C	ECM32	P32644	1121 aa	Known RBP	4.51	□□□□□ -1.69
YDR220C	YDR220C	PSA1	P41940	361 aa	Known RBP	4.51	□□□□□ -1.69
YDR220C	YDR220C	GPD1	Q00055	391 aa	Known RBP	4.51	□□□□□ -1.69
YDR220C	YDR220C	UGO1	Q03327	502 aa		4.51	□□□□□ -1.69
YDR220C	YDR220C	IME1	P21190	360 aa		4.5	□□□□□ -1.69
YDR220C	YDR220C	VBA4	Q04602	768 aa	Known RBP	4.5	□□□□□ -1.69
YDR220C	YDR220C	THI4	P32318	326 aa		4.49	□□□□□ -1.69
YDR220C	YDR220C	YKU70	P32807	602 aa		4.49	□□□□□ -1.69
YDR220C	YDR220C	YPL068C	Q02749	293 aa		4.49	□□□□□ -1.69
YDR220C	YDR220C	COG8	Q04632	607 aa		4.49	□□□□□ -1.69
YDR220C	YDR220C	YLR407W	Q06070	228 aa		4.49	□□□□□ -1.69
YDR220C	YDR220C	YPS7	Q06325	596 aa		4.49	□□□□□ -1.69
YDR220C	YDR220C	PMA2	P19657	947 aa		4.48	□□□□□ -1.69
YDR220C	YDR220C	TMN3	P40071	706 aa		4.48	□□□□□ -1.69
YDR220C	YDR220C	STB2	P46679	850 aa		4.48	□□□□□ -1.69
YDR220C	YDR220C	ATP23	P53722	227 aa		4.48	□□□□□ -1.69
YDR220C	YDR220C	BUD8	P41698	603 aa		4.47	□□□□□ -1.69
YDR220C	YDR220C	DAK1	P54838	584 aa	Known RBP	4.47	□□□□□ -1.69
YDR220C	YDR220C	NTG2	Q08214	380 aa		4.47	□□□□□ -1.69
YDR220C	YDR220C	BEM3	P32873	1128 aa		4.46	□□□□□ -1.7
YDR220C	YDR220C	RIM4	P38741	713 aa		4.46	□□□□□ -1.7
YDR220C	YDR220C	MEP2	P41948	499 aa		4.46	□□□□□ -1.7
YDR220C	YDR220C	YIP4	P53093	235 aa		4.46	□□□□□ -1.7
YDR220C	YDR220C	MET13	P53128	600 aa		4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms