RNA–Protein interactions for RNA: YDR174W

HMO1, Transcript of Chromatin associated high mobility group (HMG) family member, yeast

Gene HMO1, Length 741 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMO1	YDR174W	YPS7	Q06325	596 aa		4.28	□□□□□ -1.72
HMO1	YDR174W	YTM1	Q12024	460 aa	Predicted RBP	4.28	□□□□□ -1.72
HMO1	YDR174W	CHS5	Q12114	671 aa	Known RBP	4.28	□□□□□ -1.72
HMO1	YDR174W	USV1	Q12132	391 aa		4.28	□□□□□ -1.72
HMO1	YDR174W	KIN3	P22209	435 aa		4.27	□□□□□ -1.73
HMO1	YDR174W	YJL206C	P39529	758 aa		4.27	□□□□□ -1.73
HMO1	YDR174W	BDH2	P39713	417 aa		4.27	□□□□□ -1.73
HMO1	YDR174W	MNN11	P46985	422 aa	Known RBP	4.27	□□□□□ -1.73
HMO1	YDR174W	BFA1	P47113	574 aa		4.27	□□□□□ -1.73
HMO1	YDR174W	RFX1	P48743	811 aa		4.27	□□□□□ -1.73
HMO1	YDR174W	YGR237C	P50089	785 aa		4.27	□□□□□ -1.73
HMO1	YDR174W	YGL081W	P53156	320 aa		4.27	□□□□□ -1.73
HMO1	YDR174W	HFI1	Q12060	488 aa		4.27	□□□□□ -1.73
HMO1	YDR174W	APM4	Q99186	491 aa		4.27	□□□□□ -1.73
HMO1	YDR174W	RPS17A	P02407	136 aa	Known RBP	4.26	□□□□□ -1.73
HMO1	YDR174W	RPS17B	P14127	136 aa	Known RBP	4.26	□□□□□ -1.73
HMO1	YDR174W	GFA1	P14742	717 aa	Known RBP	4.26	□□□□□ -1.73
HMO1	YDR174W	CDC43	P18898	376 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	KIN82	P25341	720 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	OAF3	P36023	863 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	GLG1	P36143	616 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	TDP1	P38319	544 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	UBP12	P39538	1254 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	YIL077C	P40508	320 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	BUD8	P41698	603 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	TAH11	P47112	604 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	CTR1	P49573	406 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	NOP15	P53927	220 aa	Predicted RBP	4.26	□□□□□ -1.73
HMO1	YDR174W	HFD1	Q04458	532 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	VBA4	Q04602	768 aa	Known RBP	4.26	□□□□□ -1.73
HMO1	YDR174W	STP4	Q07351	490 aa		4.26	□□□□□ -1.73
HMO1	YDR174W	DMC1	P25453	334 aa		4.25	□□□□□ -1.73
HMO1	YDR174W	SEC65	P29478	273 aa		4.25	□□□□□ -1.73
HMO1	YDR174W	MSS1	P32559	526 aa	Predicted RBP	4.25	□□□□□ -1.73
HMO1	YDR174W	IES1	P43579	692 aa		4.25	□□□□□ -1.73
HMO1	YDR174W	MPS3	P47069	682 aa		4.25	□□□□□ -1.73
HMO1	YDR174W	GIS1	Q03833	894 aa		4.25	□□□□□ -1.73
HMO1	YDR174W	YFT2	Q06676	274 aa		4.25	□□□□□ -1.73
HMO1	YDR174W	FAP7	Q12055	197 aa	Predicted RBP	4.25	□□□□□ -1.73
HMO1	YDR174W	RPS21A	P0C0V8	87 aa	Known RBP	4.24	□□□□□ -1.73
HMO1	YDR174W	DID4	P36108	232 aa		4.24	□□□□□ -1.73
HMO1	YDR174W	CTP1	P38152	299 aa		4.24	□□□□□ -1.73
HMO1	YDR174W	FAT1	P38225	669 aa		4.24	□□□□□ -1.73
HMO1	YDR174W	COS111	P38308	924 aa		4.24	□□□□□ -1.73
HMO1	YDR174W	KHA1	P40309	873 aa		4.24	□□□□□ -1.73
HMO1	YDR174W	YGR151C	P53287	111 aa		4.24	□□□□□ -1.73
HMO1	YDR174W	YHM2	Q04013	314 aa		4.24	□□□□□ -1.73
HMO1	YDR174W	GLN4	P13188	809 aa	Known RBP	4.23	□□□□□ -1.73
HMO1	YDR174W	HCA4	P20448	770 aa	Known RBP	4.23	□□□□□ -1.73
HMO1	YDR174W	PRP22	P24384	1145 aa	Known RBP	4.23	□□□□□ -1.73
HMO1	YDR174W	FUB1	P25659	250 aa		4.23	□□□□□ -1.73
HMO1	YDR174W	EMP70	P32802	667 aa		4.23	□□□□□ -1.73
HMO1	YDR174W	PXA1	P41909	870 aa		4.23	□□□□□ -1.73
HMO1	YDR174W	YDL086W	Q07505	273 aa		4.23	□□□□□ -1.73
HMO1	YDR174W	RPS9B	P05755	195 aa	Known RBP	4.22	□□□□□ -1.73
HMO1	YDR174W	ABF1	P14164	731 aa		4.22	□□□□□ -1.73
HMO1	YDR174W	CDC26	P14724	124 aa		4.22	□□□□□ -1.73
HMO1	YDR174W	SEC15	P22224	910 aa		4.22	□□□□□ -1.73
HMO1	YDR174W	GMH1	P36125	273 aa		4.22	□□□□□ -1.73
HMO1	YDR174W	YHR097C	P38809	366 aa	Known RBP	4.22	□□□□□ -1.73
HMO1	YDR174W	YIL166C	P40445	542 aa		4.22	□□□□□ -1.73
HMO1	YDR174W	SPO1	P53541	631 aa		4.22	□□□□□ -1.73
HMO1	YDR174W	PTA1	Q01329	785 aa	Predicted RBP	4.22	□□□□□ -1.73
HMO1	YDR174W	NSE5	Q03718	556 aa		4.22	□□□□□ -1.73
HMO1	YDR174W	PPN1	Q04119	674 aa		4.22	□□□□□ -1.73
HMO1	YDR174W	BMS1	Q08965	1183 aa	Known RBP	4.22	□□□□□ -1.73
HMO1	YDR174W	PRE4	P30657	266 aa		4.21	□□□□□ -1.74
HMO1	YDR174W	NTH1	P32356	751 aa		4.21	□□□□□ -1.74
HMO1	YDR174W	GRX4	P32642	244 aa		4.21	□□□□□ -1.74
HMO1	YDR174W	KSP1	P38691	1029 aa	Known RBP	4.21	□□□□□ -1.74
HMO1	YDR174W	DUN1	P39009	513 aa		4.21	□□□□□ -1.74
HMO1	YDR174W	VID28	P40547	921 aa		4.21	□□□□□ -1.74
HMO1	YDR174W	TAF4	P50105	388 aa		4.21	□□□□□ -1.74
HMO1	YDR174W	YSH1	Q06224	779 aa	Predicted RBP	4.21	□□□□□ -1.74
HMO1	YDR174W	IZH3	Q07959	543 aa		4.21	□□□□□ -1.74
HMO1	YDR174W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
HMO1	YDR174W	MF(ALPHA)2	P32435	120 aa		4.2	□□□□□ -1.74
HMO1	YDR174W	DUG1	P43616	481 aa	Known RBP	4.2	□□□□□ -1.74
HMO1	YDR174W	SNF12	P53628	566 aa		4.2	□□□□□ -1.74
HMO1	YDR174W	RKI1	Q12189	258 aa		4.2	□□□□□ -1.74
HMO1	YDR174W	BNR1	P40450	1375 aa		4.19	□□□□□ -1.74
HMO1	YDR174W	ADY2	P25613	283 aa		4.19	□□□□□ -1.74
HMO1	YDR174W	MTC7	P32633	139 aa		4.19	□□□□□ -1.74
HMO1	YDR174W	CDS1	P38221	457 aa		4.19	□□□□□ -1.74
HMO1	YDR174W	YEL020C	P39994	560 aa		4.19	□□□□□ -1.74
HMO1	YDR174W	MIT1	P40002	666 aa		4.19	□□□□□ -1.74
HMO1	YDR174W	YEN1	P40028	759 aa		4.19	□□□□□ -1.74
HMO1	YDR174W	GPP2	P40106	250 aa	Known RBP	4.19	□□□□□ -1.74
HMO1	YDR174W	ATF1	P40353	525 aa		4.19	□□□□□ -1.74
HMO1	YDR174W	NMA2	P53204	395 aa		4.19	□□□□□ -1.74
HMO1	YDR174W	FDC1	Q03034	503 aa		4.19	□□□□□ -1.74
HMO1	YDR174W	HLR1	Q04429	423 aa		4.19	□□□□□ -1.74
HMO1	YDR174W	TUP1	P16649	713 aa		4.18	□□□□□ -1.74
HMO1	YDR174W	KCC4	P25389	1037 aa		4.18	□□□□□ -1.74
HMO1	YDR174W	DAL3	P32459	195 aa		4.18	□□□□□ -1.74
HMO1	YDR174W	SER1	P33330	395 aa	Known RBP	4.18	□□□□□ -1.74
HMO1	YDR174W	FLO10	P36170	1169 aa		4.18	□□□□□ -1.74
HMO1	YDR174W	YMC2	P38087	329 aa		4.18	□□□□□ -1.74
HMO1	YDR174W	MUP3	P38734	546 aa		4.18	□□□□□ -1.74
HMO1	YDR174W	CRG1	P38892	291 aa	RIP-Chip data	4.18	□□□□□ -1.74	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms