RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A BNR1P40450 1375 aa4.12□□□□□ -1.75
YDR170W-AYDR170W-A RPS17AP02407 136 aaKnown RBP4.12□□□□□ -1.75
YDR170W-AYDR170W-A GLN4P13188 809 aaKnown RBP4.12□□□□□ -1.75
YDR170W-AYDR170W-A RPS17BP14127 136 aaKnown RBP4.12□□□□□ -1.75
YDR170W-AYDR170W-A MVD1P32377 396 aaKnown RBP4.12□□□□□ -1.75
YDR170W-AYDR170W-A PET127P32606 800 aa4.12□□□□□ -1.75
YDR170W-AYDR170W-A PPS1P38148 807 aa4.12□□□□□ -1.75
YDR170W-AYDR170W-A NIT2P47016 307 aa4.12□□□□□ -1.75
YDR170W-AYDR170W-A RGC1Q06108 1083 aaKnown RBP4.12□□□□□ -1.75
YDR170W-AYDR170W-A DIA2Q08496 732 aaPredicted RBP4.12□□□□□ -1.75
YDR170W-AYDR170W-A MSL5Q12186 476 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75not detected
YDR170W-AYDR170W-A ERG20P08524 352 aaKnown RBP4.11□□□□□ -1.75
YDR170W-AYDR170W-A PEX1P24004 1043 aa4.11□□□□□ -1.75
YDR170W-AYDR170W-A SER1P33330 395 aaKnown RBP4.11□□□□□ -1.75
YDR170W-AYDR170W-A ENP1P38333 483 aaKnown RBP4.11□□□□□ -1.75
YDR170W-AYDR170W-A REV7P38927 245 aa4.11□□□□□ -1.75
YDR170W-AYDR170W-A DUN1P39009 513 aa4.11□□□□□ -1.75
YDR170W-AYDR170W-A VID28P40547 921 aa4.11□□□□□ -1.75
YDR170W-AYDR170W-A SEC5P89102 971 aa4.11□□□□□ -1.75
YDR170W-AYDR170W-A RCR2Q03446 210 aaKnown RBP4.11□□□□□ -1.75
YDR170W-AYDR170W-A SKY1Q03656 742 aa4.11□□□□□ -1.75
YDR170W-AYDR170W-A YPR027CQ12079 277 aa4.11□□□□□ -1.75
YDR170W-AYDR170W-A YNL162W-AQ3E7A8 72 aa4.11□□□□□ -1.75
YDR170W-AYDR170W-A IME1P21190 360 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A HIR1P32479 840 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A TFC4P33339 1025 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A BIT2P38346 545 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A SFB3P38810 929 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A FMP52P40008 231 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A SDS3P40505 327 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A BIT61P47041 543 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A PAN2P53010 1115 aaPredicted RBP4.1□□□□□ -1.75
YDR170W-AYDR170W-A PEX14P53112 341 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A SPC105P53148 917 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A VBA4Q04602 768 aaKnown RBP4.1□□□□□ -1.75
YDR170W-AYDR170W-A THI22Q06490 572 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A STP4Q07351 490 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A POM34Q12445 299 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A YKL033W-AQ86ZR7 236 aa4.1□□□□□ -1.75
YDR170W-AYDR170W-A HCA4P20448 770 aaKnown RBP4.09□□□□□ -1.75
YDR170W-AYDR170W-A ATP12P22135 325 aa4.09□□□□□ -1.75
YDR170W-AYDR170W-A PLC1P32383 869 aa4.09□□□□□ -1.75
YDR170W-AYDR170W-A YPT7P32939 208 aa4.09□□□□□ -1.75
YDR170W-AYDR170W-A HRB1P38922 454 aaKnown RBP RIP-Chip data4.09□□□□□ -1.75not detected
YDR170W-AYDR170W-A BUD8P41698 603 aa4.09□□□□□ -1.75
YDR170W-AYDR170W-A IES1P43579 692 aa4.09□□□□□ -1.75
YDR170W-AYDR170W-A RNR4P49723 345 aaKnown RBP4.09□□□□□ -1.75
YDR170W-AYDR170W-A GLO1P50107 326 aa4.09□□□□□ -1.75
YDR170W-AYDR170W-A ZRT2Q12436 422 aa4.09□□□□□ -1.75
YDR170W-AYDR170W-A NOP56Q12460 504 aaKnown RBP RIP-Chip data4.09□□□□□ -1.75not detected
YDR170W-AYDR170W-A RPS9BP05755 195 aaKnown RBP4.08□□□□□ -1.76
YDR170W-AYDR170W-A SIR3P06701 978 aa4.08□□□□□ -1.76
YDR170W-AYDR170W-A CDC26P14724 124 aa4.08□□□□□ -1.76
YDR170W-AYDR170W-A COX11P19516 300 aaKnown RBP4.08□□□□□ -1.76
YDR170W-AYDR170W-A SEC15P22224 910 aa4.08□□□□□ -1.76
YDR170W-AYDR170W-A KIN82P25341 720 aa4.08□□□□□ -1.76
YDR170W-AYDR170W-A HEM12P32347 362 aaPredicted RBP4.08□□□□□ -1.76
YDR170W-AYDR170W-A BCS1P32839 456 aa4.08□□□□□ -1.76
YDR170W-AYDR170W-A PXA1P41909 870 aa4.08□□□□□ -1.76
YDR170W-AYDR170W-A DAS1P47005 663 aa4.08□□□□□ -1.76
YDR170W-AYDR170W-A SUT2Q12286 268 aa4.08□□□□□ -1.76
YDR170W-AYDR170W-A KAR1P11927 433 aa4.07□□□□□ -1.76
YDR170W-AYDR170W-A PRP22P24384 1145 aaKnown RBP4.07□□□□□ -1.76
YDR170W-AYDR170W-A FEN2P25621 512 aaKnown RBP4.07□□□□□ -1.76
YDR170W-AYDR170W-A DGR2P32330 852 aa4.07□□□□□ -1.76
YDR170W-AYDR170W-A PPZ2P33329 710 aa4.07□□□□□ -1.76
YDR170W-AYDR170W-A PIG2P40187 538 aa4.07□□□□□ -1.76
YDR170W-AYDR170W-A YIL077CP40508 320 aa4.07□□□□□ -1.76
YDR170W-AYDR170W-A TAF4P50105 388 aa4.07□□□□□ -1.76
YDR170W-AYDR170W-A TEL2P53038 688 aa4.07□□□□□ -1.76
YDR170W-AYDR170W-A SLD3P53135 668 aa4.07□□□□□ -1.76
YDR170W-AYDR170W-A RIA1P53893 1110 aa4.07□□□□□ -1.76
YDR170W-AYDR170W-A SEC6P32844 805 aa4.06□□□□□ -1.76
YDR170W-AYDR170W-A PHO11P35842 467 aa4.06□□□□□ -1.76
YDR170W-AYDR170W-A GRX7P38068 203 aa4.06□□□□□ -1.76
YDR170W-AYDR170W-A COS111P38308 924 aa4.06□□□□□ -1.76
YDR170W-AYDR170W-A PHO12P38693 467 aa4.06□□□□□ -1.76
YDR170W-AYDR170W-A YHL017WP38745 532 aa4.06□□□□□ -1.76
YDR170W-AYDR170W-A PCL5P38794 229 aa4.06□□□□□ -1.76
YDR170W-AYDR170W-A PEX8P53248 589 aa4.06□□□□□ -1.76
YDR170W-AYDR170W-A FHN1P53279 174 aa4.06□□□□□ -1.76
YDR170W-AYDR170W-A YAP1802P53309 568 aa4.06□□□□□ -1.76
YDR170W-AYDR170W-A PPN1Q04119 674 aa4.06□□□□□ -1.76
YDR170W-AYDR170W-A ECM38Q05902 660 aaPredicted RBP4.06□□□□□ -1.76
YDR170W-AYDR170W-A HBT1Q07653 1046 aaKnown RBP4.06□□□□□ -1.76
YDR170W-AYDR170W-A NGL1Q08213 363 aaKnown RBP4.06□□□□□ -1.76
YDR170W-AYDR170W-A MRH1Q12117 320 aaPredicted RBP4.06□□□□□ -1.76
YDR170W-AYDR170W-A CLF1Q12309 687 aaPredicted RBP4.06□□□□□ -1.76
YDR170W-AYDR170W-A ACO1P19414 778 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
YDR170W-AYDR170W-A PRP28P23394 588 aa4.05□□□□□ -1.76
YDR170W-AYDR170W-A MF(ALPHA)2P32435 120 aa4.05□□□□□ -1.76
YDR170W-AYDR170W-A HXT4P32467 576 aa4.05□□□□□ -1.76
YDR170W-AYDR170W-A CBR1P38626 284 aaKnown RBP4.05□□□□□ -1.76
YDR170W-AYDR170W-A YHR033WP38690 423 aa4.05□□□□□ -1.76
YDR170W-AYDR170W-A RIX1P38883 763 aaPredicted RBP4.05□□□□□ -1.76
YDR170W-AYDR170W-A EMP65P40085 556 aa4.05□□□□□ -1.76
YDR170W-AYDR170W-A ENP2P48234 707 aaKnown RBP4.05□□□□□ -1.76
YDR170W-AYDR170W-A RFX1P48743 811 aa4.05□□□□□ -1.76
YDR170W-AYDR170W-A SSL2Q00578 843 aa4.05□□□□□ -1.76
YDR170W-AYDR170W-A NSE5Q03718 556 aa4.05□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 232.9 ms