RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C MGM1P32266 881 aa1.11□□□□□ -2.23
SEC1YDR164C STE5P32917 917 aa1.11□□□□□ -2.23
SEC1YDR164C PEX6P33760 1030 aa1.11□□□□□ -2.23
SEC1YDR164C MIP6P38760 659 aaKnown RBP1.11□□□□□ -2.23
SEC1YDR164C GYP8P43570 497 aa1.11□□□□□ -2.23
SEC1YDR164C PFD1P46988 109 aa1.11□□□□□ -2.23
SEC1YDR164C MPS3P47069 682 aa1.11□□□□□ -2.23
SEC1YDR164C BNA2P47125 453 aa1.11□□□□□ -2.23
SEC1YDR164C DIP5P53388 608 aa1.11□□□□□ -2.23
SEC1YDR164C IDP3P53982 420 aaKnown RBP1.11□□□□□ -2.23
SEC1YDR164C NAN1Q02931 896 aaKnown RBP1.11□□□□□ -2.23
SEC1YDR164C ARG7Q04728 441 aa1.11□□□□□ -2.23
SEC1YDR164C TAF2P23255 1407 aa1.11□□□□□ -2.23
SEC1YDR164C ERG6P25087 383 aaKnown RBP1.1□□□□□ -2.23
SEC1YDR164C RPL8BP29453 256 aaKnown RBP1.1□□□□□ -2.23
SEC1YDR164C YEL1P34225 687 aa1.1□□□□□ -2.23
SEC1YDR164C YHR097CP38809 366 aaKnown RBP1.1□□□□□ -2.23
SEC1YDR164C VAC8P39968 578 aa1.1□□□□□ -2.23
SEC1YDR164C GET2P40056 285 aa1.1□□□□□ -2.23
SEC1YDR164C RSC8P43609 557 aaKnown RBP1.1□□□□□ -2.23
SEC1YDR164C IOC4Q04213 475 aa1.1□□□□□ -2.23
SEC1YDR164C GFD1Q04839 188 aaKnown RBP1.1□□□□□ -2.23
SEC1YDR164C WRS1Q12109 432 aaKnown RBP1.1□□□□□ -2.23
SEC1YDR164C CIT2P08679 460 aa1.1□□□□□ -2.23
SEC1YDR164C RAD18P10862 487 aa1.1□□□□□ -2.23
SEC1YDR164C SRP40P32583 406 aaPredicted RBP1.1□□□□□ -2.23
SEC1YDR164C KHA1P40309 873 aa1.1□□□□□ -2.23
SEC1YDR164C YJL043WP47053 257 aa1.1□□□□□ -2.23
SEC1YDR164C NOP9P47077 666 aaKnown RBP1.1□□□□□ -2.23
SEC1YDR164C YGL117WP53133 265 aa1.1□□□□□ -2.23
SEC1YDR164C THI22Q06490 572 aa1.1□□□□□ -2.23
SEC1YDR164C GRS2Q06817 618 aa1.1□□□□□ -2.23
SEC1YDR164C YDL073WQ07454 984 aa1.1□□□□□ -2.23
SEC1YDR164C PRS5Q12265 496 aaKnown RBP1.1□□□□□ -2.23
SEC1YDR164C FRE7Q12333 620 aa1.1□□□□□ -2.23
SEC1YDR164C FEN2P25621 512 aaKnown RBP1.09□□□□□ -2.23
SEC1YDR164C PER1P25625 357 aa1.09□□□□□ -2.23
SEC1YDR164C OCA5P38738 679 aa1.09□□□□□ -2.23
SEC1YDR164C YMR124WP39523 943 aaKnown RBP1.09□□□□□ -2.23
SEC1YDR164C RSC9Q03124 581 aa1.09□□□□□ -2.23
SEC1YDR164C HMO1Q03973 246 aaKnown RBP1.09□□□□□ -2.23
SEC1YDR164C CRC1Q12289 327 aa1.09□□□□□ -2.23
SEC1YDR164C ZPS1Q12512 249 aa1.09□□□□□ -2.23
SEC1YDR164C ECM3Q99252 613 aa1.09□□□□□ -2.23
SEC1YDR164C YTA7P40340 1379 aa1.09□□□□□ -2.24
SEC1YDR164C KIN82P25341 720 aa1.08□□□□□ -2.24
SEC1YDR164C APN2P38207 520 aa1.08□□□□□ -2.24
SEC1YDR164C SLX1P38324 304 aa1.08□□□□□ -2.24
SEC1YDR164C RTT107P38850 1070 aa1.08□□□□□ -2.24
SEC1YDR164C MTG2P38860 518 aa1.08□□□□□ -2.24
SEC1YDR164C DUN1P39009 513 aa1.08□□□□□ -2.24
SEC1YDR164C YIL092WP40497 633 aa1.08□□□□□ -2.24
SEC1YDR164C PIP2P52960 996 aa1.08□□□□□ -2.24
SEC1YDR164C RPN7Q06103 429 aaKnown RBP1.08□□□□□ -2.24
SEC1YDR164C POM34Q12445 299 aa1.08□□□□□ -2.24
SEC1YDR164C INO80P53115 1489 aa1.08□□□□□ -2.24
SEC1YDR164C CIT1P00890 479 aa1.08□□□□□ -2.24
SEC1YDR164C RPL7AP05737 244 aaKnown RBP1.08□□□□□ -2.24
SEC1YDR164C PMA2P19657 947 aa1.08□□□□□ -2.24
SEC1YDR164C YAP1P19880 650 aaKnown RBP1.08□□□□□ -2.24
SEC1YDR164C MET30P39014 640 aa1.08□□□□□ -2.24
SEC1YDR164C YIL077CP40508 320 aa1.08□□□□□ -2.24
SEC1YDR164C OPT1P40897 799 aa1.08□□□□□ -2.24
SEC1YDR164C YGL260WP53056 76 aa1.08□□□□□ -2.24
SEC1YDR164C YGR125WP53273 1036 aa1.08□□□□□ -2.24
SEC1YDR164C CEF1Q03654 590 aaPredicted RBP1.08□□□□□ -2.24
SEC1YDR164C RPL7BQ12213 244 aaKnown RBP1.08□□□□□ -2.24
SEC1YDR164C RPS9BP05755 195 aaKnown RBP1.07□□□□□ -2.24
SEC1YDR164C PHO2P07269 559 aa1.07□□□□□ -2.24
SEC1YDR164C GRX1P25373 110 aaKnown RBP1.07□□□□□ -2.24
SEC1YDR164C SDS24P38314 527 aa1.07□□□□□ -2.24
SEC1YDR164C FLO5P38894 1075 aa1.07□□□□□ -2.24
SEC1YDR164C GID8P40208 455 aa1.07□□□□□ -2.24
SEC1YDR164C HXT16P47185 567 aa1.07□□□□□ -2.24
SEC1YDR164C RFX1P48743 811 aa1.07□□□□□ -2.24
SEC1YDR164C BOP3P53958 396 aa1.07□□□□□ -2.24
SEC1YDR164C ALD6P54115 500 aaKnown RBP1.07□□□□□ -2.24
SEC1YDR164C GPD1Q00055 391 aaKnown RBP1.07□□□□□ -2.24
SEC1YDR164C TRS23Q03784 219 aa1.07□□□□□ -2.24
SEC1YDR164C YTH1Q06102 208 aaPredicted RBP1.07□□□□□ -2.24
SEC1YDR164C SNA4Q07549 140 aa1.07□□□□□ -2.24
SEC1YDR164C SRL1Q08673 210 aa1.07□□□□□ -2.24
SEC1YDR164C YPL216WQ08964 1102 aa1.07□□□□□ -2.24
SEC1YDR164C HER1Q12276 1246 aa1.07□□□□□ -2.24
SEC1YDR164C BI2P03873 423 aa1.07□□□□□ -2.24
SEC1YDR164C WHI2P12611 486 aa1.07□□□□□ -2.24
SEC1YDR164C SSD1P24276 1250 aaKnown RBP RIP-Chip data1.07□□□□□ -2.24not detected
SEC1YDR164C PRP22P24384 1145 aaKnown RBP1.07□□□□□ -2.24
SEC1YDR164C ATO2P32907 282 aa1.07□□□□□ -2.24
SEC1YDR164C STO1P34160 861 aaKnown RBP1.07□□□□□ -2.24
SEC1YDR164C COS111P38308 924 aa1.07□□□□□ -2.24
SEC1YDR164C ARC40P38328 384 aaKnown RBP1.07□□□□□ -2.24
SEC1YDR164C SET2P46995 733 aaKnown RBP1.07□□□□□ -2.24
SEC1YDR164C PCL10P53124 433 aa1.07□□□□□ -2.24
SEC1YDR164C COQ6P53318 479 aa1.07□□□□□ -2.24
SEC1YDR164C YNL058CP53947 316 aa1.07□□□□□ -2.24
SEC1YDR164C BSP1Q06604 576 aa1.07□□□□□ -2.24
SEC1YDR164C YFT2Q06676 274 aa1.07□□□□□ -2.24
SEC1YDR164C TGS1Q12052 315 aa1.07□□□□□ -2.24
SEC1YDR164C CPA2P03965 1118 aaKnown RBP1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms