RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W YML083CQ04526 418 aa4.36□□□□□ -1.71
TRS85YDR108W YEH2Q07950 538 aa4.36□□□□□ -1.71
TRS85YDR108W TYW1Q08960 810 aaKnown RBP4.36□□□□□ -1.71
TRS85YDR108W YPL150WQ12152 901 aa4.36□□□□□ -1.71
TRS85YDR108W RUP1Q12242 671 aa4.36□□□□□ -1.71
TRS85YDR108W SPO21Q12411 609 aa4.36□□□□□ -1.71
TRS85YDR108W IML1P47170 1584 aa4.35□□□□□ -1.71
TRS85YDR108W GPA2P10823 449 aa4.35□□□□□ -1.71
TRS85YDR108W RED1P14291 827 aa4.35□□□□□ -1.71
TRS85YDR108W MSS116P15424 664 aaKnown RBP4.35□□□□□ -1.71
TRS85YDR108W KAR2P16474 682 aaKnown RBP4.35□□□□□ -1.71
TRS85YDR108W LCB1P25045 558 aaKnown RBP4.35□□□□□ -1.71
TRS85YDR108W YJU3P28321 313 aa4.35□□□□□ -1.71
TRS85YDR108W MEI4P29467 408 aa4.35□□□□□ -1.71
TRS85YDR108W YKT6P36015 200 aaKnown RBP4.35□□□□□ -1.71
TRS85YDR108W RPH1P39956 796 aa4.35□□□□□ -1.71
TRS85YDR108W YER186CP40101 306 aa4.35□□□□□ -1.71
TRS85YDR108W EFM4P40516 257 aa4.35□□□□□ -1.71
TRS85YDR108W PSP2P50109 593 aaKnown RBP4.35□□□□□ -1.71
TRS85YDR108W SLT2Q00772 484 aa4.35□□□□□ -1.71
TRS85YDR108W NOG1Q02892 647 aaKnown RBP4.35□□□□□ -1.71
TRS85YDR108W FCP1Q03254 732 aa4.35□□□□□ -1.71
TRS85YDR108W CSI1Q04368 295 aa4.35□□□□□ -1.71
TRS85YDR108W GLO2Q05584 274 aa4.35□□□□□ -1.71
TRS85YDR108W RGC1Q06108 1083 aaKnown RBP4.35□□□□□ -1.71
TRS85YDR108W YLR346CQ06139 101 aa4.35□□□□□ -1.71
TRS85YDR108W PIG1Q06216 648 aa4.35□□□□□ -1.71
TRS85YDR108W ATG29Q12092 213 aa4.35□□□□□ -1.71
TRS85YDR108W DCS2Q12123 353 aa4.35□□□□□ -1.71
TRS85YDR108W RPB2P08518 1224 aaKnown RBP4.34□□□□□ -1.71
TRS85YDR108W PMS1P14242 873 aa4.34□□□□□ -1.71
TRS85YDR108W KIN3P22209 435 aa4.34□□□□□ -1.71
TRS85YDR108W RET1P22276 1149 aaKnown RBP4.34□□□□□ -1.71
TRS85YDR108W URA1P28272 314 aaPredicted RBP4.34□□□□□ -1.71
TRS85YDR108W SRB4P32569 687 aa4.34□□□□□ -1.71
TRS85YDR108W SUV3P32580 737 aa4.34□□□□□ -1.71
TRS85YDR108W YME1P32795 747 aa4.34□□□□□ -1.71
TRS85YDR108W TPO5P36029 618 aa4.34□□□□□ -1.71
TRS85YDR108W YBR287WP38355 427 aa4.34□□□□□ -1.71
TRS85YDR108W RSC30P38781 883 aa4.34□□□□□ -1.71
TRS85YDR108W ZRG8P40021 1076 aa4.34□□□□□ -1.71
TRS85YDR108W QDR2P40474 542 aa4.34□□□□□ -1.71
TRS85YDR108W CAB2P40506 365 aa4.34□□□□□ -1.71
TRS85YDR108W MDE1P47095 244 aa4.34□□□□□ -1.71
TRS85YDR108W IMD3P50095 523 aaKnown RBP4.34□□□□□ -1.71
TRS85YDR108W BSC5P53755 489 aa4.34□□□□□ -1.71
TRS85YDR108W NGL3Q03210 505 aa4.34□□□□□ -1.71
TRS85YDR108W DON1Q05610 365 aa4.34□□□□□ -1.71
TRS85YDR108W SIL1Q08199 421 aa4.34□□□□□ -1.71
TRS85YDR108W SGO1Q08490 590 aa4.34□□□□□ -1.71
TRS85YDR108W RPO21P04050 1733 aaKnown RBP4.34□□□□□ -1.71
TRS85YDR108W DBP3P20447 523 aaKnown RBP4.34□□□□□ -1.71
TRS85YDR108W ISY1P21374 235 aaPredicted RBP4.34□□□□□ -1.71
TRS85YDR108W VMA4P22203 233 aaKnown RBP4.34□□□□□ -1.71
TRS85YDR108W YCR051WP25631 222 aa4.34□□□□□ -1.71
TRS85YDR108W SEC65P29478 273 aa4.34□□□□□ -1.71
TRS85YDR108W CRM1P30822 1084 aaKnown RBP4.34□□□□□ -1.71
TRS85YDR108W XRS2P33301 854 aa4.34□□□□□ -1.71
TRS85YDR108W MRPL17P36528 281 aa4.34□□□□□ -1.71
TRS85YDR108W YBL086CP38177 466 aa4.34□□□□□ -1.71
TRS85YDR108W YTA12P40341 825 aa4.34□□□□□ -1.71
TRS85YDR108W MNT3P40549 630 aa4.34□□□□□ -1.71
TRS85YDR108W LYS14P40971 790 aa4.34□□□□□ -1.71
TRS85YDR108W TDA10P42938 290 aa4.34□□□□□ -1.71
TRS85YDR108W SWP82P43554 623 aa4.34□□□□□ -1.71
TRS85YDR108W LIF1P53150 421 aa4.34□□□□□ -1.71
TRS85YDR108W COG2P53271 262 aa4.34□□□□□ -1.71
TRS85YDR108W TOF1P53840 1238 aa4.34□□□□□ -1.71
TRS85YDR108W TMA20P89886 181 aaPredicted RBP4.34□□□□□ -1.71
TRS85YDR108W RVB1Q03940 463 aaKnown RBP4.34□□□□□ -1.71
TRS85YDR108W VPS64Q03944 604 aa4.34□□□□□ -1.71
TRS85YDR108W GTB1Q04924 702 aa4.34□□□□□ -1.71
TRS85YDR108W HPF1Q05164 967 aa4.34□□□□□ -1.71
TRS85YDR108W DBP9Q06218 594 aaKnown RBP4.34□□□□□ -1.71
TRS85YDR108W ICL2Q12031 575 aa4.34□□□□□ -1.71
TRS85YDR108W ENT1Q12518 454 aa4.34□□□□□ -1.71
TRS85YDR108W MLP1Q02455 1875 aaKnown RBP4.34□□□□□ -1.72
TRS85YDR108W RRP5Q05022 1729 aaKnown RBP4.33□□□□□ -1.72
TRS85YDR108W CYB2P00175 591 aa4.33□□□□□ -1.72
TRS85YDR108W MPH2P0CD99 609 aa4.33□□□□□ -1.72
TRS85YDR108W MTF2P10849 440 aa4.33□□□□□ -1.72
TRS85YDR108W STI1P15705 589 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
TRS85YDR108W MIP1P15801 1254 aa4.33□□□□□ -1.72
TRS85YDR108W PMA2P19657 947 aa4.33□□□□□ -1.72
TRS85YDR108W HNM1P19807 563 aa4.33□□□□□ -1.72
TRS85YDR108W SPS22P25380 463 aa4.33□□□□□ -1.72
TRS85YDR108W TRK2P28584 889 aa4.33□□□□□ -1.72
TRS85YDR108W ITR1P30605 584 aa4.33□□□□□ -1.72
TRS85YDR108W MLS1P30952 554 aa4.33□□□□□ -1.72
TRS85YDR108W EUG1P32474 517 aa4.33□□□□□ -1.72
TRS85YDR108W PPG1P32838 368 aa4.33□□□□□ -1.72
TRS85YDR108W RPT1P33299 467 aaKnown RBP4.33□□□□□ -1.72
TRS85YDR108W AST1P35183 429 aa4.33□□□□□ -1.72
TRS85YDR108W GLG1P36143 616 aa4.33□□□□□ -1.72
TRS85YDR108W RRF1P38771 230 aa4.33□□□□□ -1.72
TRS85YDR108W CCT6P39079 546 aa4.33□□□□□ -1.72
TRS85YDR108W OAF1P39720 1047 aaPredicted RBP4.33□□□□□ -1.72
TRS85YDR108W IES1P43579 692 aa4.33□□□□□ -1.72
TRS85YDR108W YJR039WP47107 1121 aa4.33□□□□□ -1.72
TRS85YDR108W SCW11P53189 542 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms