RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W TAP42Q04372 366 aa5.13□□□□□ -1.59
KIN28YDL108W PEX19Q07418 342 aa5.13□□□□□ -1.59
KIN28YDL108W RIX7Q07844 837 aaKnown RBP5.13□□□□□ -1.59
KIN28YDL108W INO80P53115 1489 aa5.13□□□□□ -1.59
KIN28YDL108W APN1P22936 367 aa5.12□□□□□ -1.59
KIN28YDL108W STE11P23561 717 aa5.12□□□□□ -1.59
KIN28YDL108W CHS3P29465 1165 aa5.12□□□□□ -1.59
KIN28YDL108W RIX1P38883 763 aaPredicted RBP5.12□□□□□ -1.59
KIN28YDL108W CKB2P38930 258 aa5.12□□□□□ -1.59
KIN28YDL108W MSS4P38994 779 aa5.12□□□□□ -1.59
KIN28YDL108W PFA3P42836 336 aa5.12□□□□□ -1.59
KIN28YDL108W YJR096WP47137 282 aa5.12□□□□□ -1.59
KIN28YDL108W MCM6P53091 1017 aaKnown RBP5.12□□□□□ -1.59
KIN28YDL108W ASI2P53895 289 aa5.12□□□□□ -1.59
KIN28YDL108W MUS81Q04149 632 aaPredicted RBP5.12□□□□□ -1.59
KIN28YDL108W HFD1Q04458 532 aa5.12□□□□□ -1.59
KIN28YDL108W SWA2Q06677 668 aa5.12□□□□□ -1.59
KIN28YDL108W YPL191CQ08930 360 aa5.12□□□□□ -1.59
KIN28YDL108W TUB3P09734 445 aaKnown RBP5.11□□□□□ -1.59
KIN28YDL108W MER1P16523 270 aa5.11□□□□□ -1.59
KIN28YDL108W GLK1P17709 500 aaKnown RBP5.11□□□□□ -1.59
KIN28YDL108W CCR4P31384 837 aaKnown RBP5.11□□□□□ -1.59
KIN28YDL108W NIP100P33420 868 aa5.11□□□□□ -1.59
KIN28YDL108W YKR018CP36114 725 aa5.11□□□□□ -1.59
KIN28YDL108W ESL1P40456 1118 aa5.11□□□□□ -1.59
KIN28YDL108W VPS4P52917 437 aa5.11□□□□□ -1.59
KIN28YDL108W PIP2P52960 996 aa5.11□□□□□ -1.59
KIN28YDL108W PEX14P53112 341 aa5.11□□□□□ -1.59
KIN28YDL108W PCL10P53124 433 aa5.11□□□□□ -1.59
KIN28YDL108W YBP2P53169 641 aa5.11□□□□□ -1.59
KIN28YDL108W YML131WQ03102 365 aa5.11□□□□□ -1.59
KIN28YDL108W CWC21Q03375 135 aaKnown RBP5.11□□□□□ -1.59
KIN28YDL108W MTQ2Q03920 221 aaPredicted RBP5.11□□□□□ -1.59
KIN28YDL108W RNH1Q04740 348 aa5.11□□□□□ -1.59
KIN28YDL108W PSR2Q07949 397 aa5.11□□□□□ -1.59
KIN28YDL108W SES1P07284 462 aaKnown RBP5.1□□□□□ -1.59
KIN28YDL108W TPM1P17536 199 aaKnown RBP5.1□□□□□ -1.59
KIN28YDL108W KAR4P25583 335 aa5.1□□□□□ -1.59
KIN28YDL108W THI80P35202 319 aa5.1□□□□□ -1.59
KIN28YDL108W RIM4P38741 713 aa5.1□□□□□ -1.59
KIN28YDL108W TDA3P38758 523 aa5.1□□□□□ -1.59
KIN28YDL108W AIM20P40451 204 aa5.1□□□□□ -1.59
KIN28YDL108W SET2P46995 733 aaKnown RBP5.1□□□□□ -1.59
KIN28YDL108W YGR153WP48238 217 aa5.1□□□□□ -1.59
KIN28YDL108W MNN10P50108 393 aaKnown RBP5.1□□□□□ -1.59
KIN28YDL108W GPG1P53130 126 aa5.1□□□□□ -1.59
KIN28YDL108W ZDS2P54786 942 aa5.1□□□□□ -1.59
KIN28YDL108W ORC4P54791 529 aa5.1□□□□□ -1.59
KIN28YDL108W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
KIN28YDL108W SPN1Q06505 410 aaPredicted RBP5.1□□□□□ -1.59
KIN28YDL108W ARV1Q06541 321 aa5.1□□□□□ -1.59
KIN28YDL108W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
KIN28YDL108W PGC1Q08959 321 aa5.1□□□□□ -1.59
KIN28YDL108W MED1Q12321 566 aa5.1□□□□□ -1.59
KIN28YDL108W RPC40P07703 335 aaKnown RBP5.09□□□□□ -1.59
KIN28YDL108W HNM1P19807 563 aa5.09□□□□□ -1.59
KIN28YDL108W RPB4P20433 221 aaPredicted RBP5.09□□□□□ -1.59
KIN28YDL108W MCM10P32354 571 aa5.09□□□□□ -1.59
KIN28YDL108W TRZ1P36159 838 aaPredicted RBP5.09□□□□□ -1.59
KIN28YDL108W RKM3P38222 552 aa5.09□□□□□ -1.59
KIN28YDL108W OTU2P38747 307 aaKnown RBP5.09□□□□□ -1.59
KIN28YDL108W MPT5P39016 859 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
KIN28YDL108W VPS8P39702 1274 aa5.09□□□□□ -1.59
KIN28YDL108W FUN12P39730 1002 aaKnown RBP5.09□□□□□ -1.59
KIN28YDL108W GPD2P41911 440 aaKnown RBP5.09□□□□□ -1.59
KIN28YDL108W RSC8P43609 557 aaKnown RBP5.09□□□□□ -1.59
KIN28YDL108W RET2P43621 546 aa5.09□□□□□ -1.59
KIN28YDL108W BNA1P47096 177 aa5.09□□□□□ -1.59
KIN28YDL108W EXG2P52911 562 aa5.09□□□□□ -1.59
KIN28YDL108W CLU1Q03690 1277 aaKnown RBP5.09□□□□□ -1.59
KIN28YDL108W YMR018WQ04364 514 aa5.09□□□□□ -1.59
KIN28YDL108W ESC8Q08119 714 aa5.09□□□□□ -1.59
KIN28YDL108W TRM11Q12463 433 aa5.09□□□□□ -1.59
KIN28YDL108W FUR1P18562 216 aaKnown RBP5.08□□□□□ -1.6
KIN28YDL108W DPH2P32461 534 aa5.08□□□□□ -1.6
KIN28YDL108W YKL133CP36066 463 aa5.08□□□□□ -1.6
KIN28YDL108W RPC37P36121 282 aa5.08□□□□□ -1.6
KIN28YDL108W RPP1P38786 293 aa5.08□□□□□ -1.6
KIN28YDL108W BFR1P38934 470 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
KIN28YDL108W SAE2P46946 345 aa5.08□□□□□ -1.6
KIN28YDL108W MET14Q02196 202 aa5.08□□□□□ -1.6
KIN28YDL108W SLU7Q02775 382 aaKnown RBP5.08□□□□□ -1.6
KIN28YDL108W NSE5Q03718 556 aa5.08□□□□□ -1.6
KIN28YDL108W RAD33Q04231 177 aa5.08□□□□□ -1.6
KIN28YDL108W ASM4Q05166 528 aa5.08□□□□□ -1.6
KIN28YDL108W ENB1Q08299 606 aa5.08□□□□□ -1.6
KIN28YDL108W NEW1Q08972 1196 aaKnown RBP5.08□□□□□ -1.6
KIN28YDL108W YTM1Q12024 460 aaPredicted RBP5.08□□□□□ -1.6
KIN28YDL108W YDR056CQ12025 205 aa5.08□□□□□ -1.6
KIN28YDL108W RUD3Q12234 484 aaKnown RBP5.08□□□□□ -1.6
KIN28YDL108W YLR415CO13578 112 aa5.07□□□□□ -1.6
KIN28YDL108W PFK1P16861 987 aaKnown RBP5.07□□□□□ -1.6
KIN28YDL108W PRP4P20053 465 aaKnown RBP5.07□□□□□ -1.6
KIN28YDL108W TRX1P22217 103 aaKnown RBP5.07□□□□□ -1.6
KIN28YDL108W MCM3P24279 971 aaKnown RBP5.07□□□□□ -1.6
KIN28YDL108W PTP2P29461 750 aa5.07□□□□□ -1.6
KIN28YDL108W SWC3P31376 625 aa5.07□□□□□ -1.6
KIN28YDL108W ARC19P33204 171 aaKnown RBP5.07□□□□□ -1.6
KIN28YDL108W SIC1P38634 284 aa5.07□□□□□ -1.6
KIN28YDL108W VPS41P38959 992 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms