RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	BIT2	P38346	545 aa		3.97	□□□□□ -1.77
PBP4	YDL053C	PIG2	P40187	538 aa		3.97	□□□□□ -1.77
PBP4	YDL053C	NOP15	P53927	220 aa	Predicted RBP	3.97	□□□□□ -1.77
PBP4	YDL053C	PTA1	Q01329	785 aa	Predicted RBP	3.97	□□□□□ -1.77
PBP4	YDL053C	VBA4	Q04602	768 aa	Known RBP	3.97	□□□□□ -1.77
PBP4	YDL053C	IRC10	Q08118	586 aa		3.97	□□□□□ -1.77
PBP4	YDL053C	MRH1	Q12117	320 aa	Predicted RBP	3.97	□□□□□ -1.77
PBP4	YDL053C	APM4	Q99186	491 aa		3.97	□□□□□ -1.77
PBP4	YDL053C	PRP28	P23394	588 aa		3.96	□□□□□ -1.78
PBP4	YDL053C	TSR4	P25040	408 aa		3.96	□□□□□ -1.78
PBP4	YDL053C	FEN2	P25621	512 aa	Known RBP	3.96	□□□□□ -1.78
PBP4	YDL053C	NDC80	P40460	691 aa		3.96	□□□□□ -1.78
PBP4	YDL053C	YIL077C	P40508	320 aa		3.96	□□□□□ -1.78
PBP4	YDL053C	STP4	Q07351	490 aa		3.96	□□□□□ -1.78
PBP4	YDL053C	CHS5	Q12114	671 aa	Known RBP	3.96	□□□□□ -1.78
PBP4	YDL053C	USV1	Q12132	391 aa		3.96	□□□□□ -1.78
PBP4	YDL053C	GLN4	P13188	809 aa	Known RBP	3.95	□□□□□ -1.78
PBP4	YDL053C	KIN82	P25341	720 aa		3.95	□□□□□ -1.78
PBP4	YDL053C	DUN1	P39009	513 aa		3.95	□□□□□ -1.78
PBP4	YDL053C	ARG2	P40360	574 aa		3.95	□□□□□ -1.78
PBP4	YDL053C	BUD8	P41698	603 aa		3.95	□□□□□ -1.78
PBP4	YDL053C	QRI1	P43123	477 aa	Known RBP	3.95	□□□□□ -1.78
PBP4	YDL053C	IES1	P43579	692 aa		3.95	□□□□□ -1.78
PBP4	YDL053C	STU2	P46675	888 aa		3.95	□□□□□ -1.78
PBP4	YDL053C	RFX1	P48743	811 aa		3.95	□□□□□ -1.78
PBP4	YDL053C	RPS9B	P05755	195 aa	Known RBP	3.94	□□□□□ -1.78
PBP4	YDL053C	SEC15	P22224	910 aa		3.94	□□□□□ -1.78
PBP4	YDL053C	DAL3	P32459	195 aa		3.94	□□□□□ -1.78
PBP4	YDL053C	SET3	P36124	751 aa		3.94	□□□□□ -1.78
PBP4	YDL053C	VID28	P40547	921 aa		3.94	□□□□□ -1.78
PBP4	YDL053C	CCT7	P42943	550 aa	Known RBP	3.94	□□□□□ -1.78
PBP4	YDL053C	ATG4	P53867	494 aa		3.94	□□□□□ -1.78
PBP4	YDL053C	CDC26	P14724	124 aa		3.93	□□□□□ -1.78
PBP4	YDL053C	CDC43	P18898	376 aa		3.93	□□□□□ -1.78
PBP4	YDL053C	KIN3	P22209	435 aa		3.93	□□□□□ -1.78
PBP4	YDL053C	PRP22	P24384	1145 aa	Known RBP	3.93	□□□□□ -1.78
PBP4	YDL053C	EUG1	P32474	517 aa		3.93	□□□□□ -1.78
PBP4	YDL053C	UBS1	P38290	277 aa		3.93	□□□□□ -1.78
PBP4	YDL053C	COS111	P38308	924 aa		3.93	□□□□□ -1.78
PBP4	YDL053C	YJL206C	P39529	758 aa		3.93	□□□□□ -1.78
PBP4	YDL053C	PXA1	P41909	870 aa		3.93	□□□□□ -1.78
PBP4	YDL053C	DUG1	P43616	481 aa	Known RBP	3.93	□□□□□ -1.78
PBP4	YDL053C	MPS3	P47069	682 aa		3.93	□□□□□ -1.78
PBP4	YDL053C	YFT2	Q06676	274 aa		3.93	□□□□□ -1.78
PBP4	YDL053C	TMA17	Q12513	150 aa		3.93	□□□□□ -1.78
PBP4	YDL053C	MSS1	P32559	526 aa	Predicted RBP	3.92	□□□□□ -1.78
PBP4	YDL053C	SER1	P33330	395 aa	Known RBP	3.92	□□□□□ -1.78
PBP4	YDL053C	GPP2	P40106	250 aa	Known RBP	3.92	□□□□□ -1.78
PBP4	YDL053C	CTR1	P49573	406 aa		3.92	□□□□□ -1.78
PBP4	YDL053C	TAF4	P50105	388 aa		3.92	□□□□□ -1.78
PBP4	YDL053C	YGR151C	P53287	111 aa		3.92	□□□□□ -1.78
PBP4	YDL053C	SPO1	P53541	631 aa		3.92	□□□□□ -1.78
PBP4	YDL053C	PPN1	Q04119	674 aa		3.92	□□□□□ -1.78
PBP4	YDL053C	TRE2	Q08693	809 aa		3.92	□□□□□ -1.78
PBP4	YDL053C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.92	□□□□□ -1.78	not detected
PBP4	YDL053C	TAF3	Q12297	353 aa		3.92	□□□□□ -1.78
PBP4	YDL053C	RMP1	Q12530	201 aa		3.92	□□□□□ -1.78
PBP4	YDL053C	ABF1	P14164	731 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	PRE4	P30657	266 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	GLG1	P36143	616 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	CTP1	P38152	299 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	YHR097C	P38809	366 aa	Known RBP	3.91	□□□□□ -1.78
PBP4	YDL053C	BDH2	P39713	417 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	KHA1	P40309	873 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	NIT2	P47016	307 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	YJR120W	P47157	116 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	VPS73	P53142	486 aa	Known RBP	3.91	□□□□□ -1.78
PBP4	YDL053C	NSE5	Q03718	556 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	YDL086W	Q07505	273 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	YPR027C	Q12079	277 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	SUT2	Q12286	268 aa		3.91	□□□□□ -1.78
PBP4	YDL053C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
PBP4	YDL053C	DMC1	P25453	334 aa		3.9	□□□□□ -1.79
PBP4	YDL053C	FUB1	P25659	250 aa		3.9	□□□□□ -1.79
PBP4	YDL053C	NTH1	P32356	751 aa		3.9	□□□□□ -1.79
PBP4	YDL053C	MF(ALPHA)2	P32435	120 aa		3.9	□□□□□ -1.79
PBP4	YDL053C	HXT4	P32467	576 aa		3.9	□□□□□ -1.79
PBP4	YDL053C	YBR071W	P38243	211 aa		3.9	□□□□□ -1.79
PBP4	YDL053C	TDP1	P38319	544 aa		3.9	□□□□□ -1.79
PBP4	YDL053C	KSP1	P38691	1029 aa	Known RBP	3.9	□□□□□ -1.79
PBP4	YDL053C	RNR4	P49723	345 aa	Known RBP	3.9	□□□□□ -1.79
PBP4	YDL053C	SKY1	Q03656	742 aa		3.9	□□□□□ -1.79
PBP4	YDL053C	YSH1	Q06224	779 aa	Predicted RBP	3.9	□□□□□ -1.79
PBP4	YDL053C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
PBP4	YDL053C	TAD3	Q9URQ3	322 aa		3.9	□□□□□ -1.79
PBP4	YDL053C	GFA1	P14742	717 aa	Known RBP	3.89	□□□□□ -1.79
PBP4	YDL053C	ATP12	P22135	325 aa		3.89	□□□□□ -1.79
PBP4	YDL053C	AEP2	P22136	580 aa		3.89	□□□□□ -1.79
PBP4	YDL053C	PAF1	P38351	445 aa		3.89	□□□□□ -1.79
PBP4	YDL053C	YHR033W	P38690	423 aa		3.89	□□□□□ -1.79
PBP4	YDL053C	TAH11	P47112	604 aa		3.89	□□□□□ -1.79
PBP4	YDL053C	ENP2	P48234	707 aa	Known RBP	3.89	□□□□□ -1.79
PBP4	YDL053C	IZH3	Q07959	543 aa		3.89	□□□□□ -1.79
PBP4	YDL053C	SSB1	P11484	613 aa	Known RBP	3.88	□□□□□ -1.79
PBP4	YDL053C	TUP1	P16649	713 aa		3.88	□□□□□ -1.79
PBP4	YDL053C	HCA4	P20448	770 aa	Known RBP	3.88	□□□□□ -1.79
PBP4	YDL053C	DGR2	P32330	852 aa		3.88	□□□□□ -1.79
PBP4	YDL053C	MTC7	P32633	139 aa		3.88	□□□□□ -1.79
PBP4	YDL053C	GMH1	P36125	273 aa		3.88	□□□□□ -1.79
PBP4	YDL053C	CRG1	P38892	291 aa	RIP-Chip data	3.88	□□□□□ -1.79	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms