RNA–Protein interactions for RNA: YBR152W

SPP381, Transcript of mRNA splicing factor, component of U4/U6.U5 tri-snRNP, yeast

Gene SPP381, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPP381	YBR152W	IRC13	Q08630	104 aa		4.89	□□□□□ -1.63
SPP381	YBR152W	YPR027C	Q12079	277 aa		4.89	□□□□□ -1.63
SPP381	YBR152W	TRM13	Q12383	476 aa		4.89	□□□□□ -1.63
SPP381	YBR152W	RPS21A	P0C0V8	87 aa	Known RBP	4.88	□□□□□ -1.63
SPP381	YBR152W	ERG6	P25087	383 aa	Known RBP	4.88	□□□□□ -1.63
SPP381	YBR152W	MVD1	P32377	396 aa	Known RBP	4.88	□□□□□ -1.63
SPP381	YBR152W	MF(ALPHA)2	P32435	120 aa		4.88	□□□□□ -1.63
SPP381	YBR152W	HIR1	P32479	840 aa		4.88	□□□□□ -1.63
SPP381	YBR152W	HIS7	P33734	552 aa	Known RBP	4.88	□□□□□ -1.63
SPP381	YBR152W	YJR120W	P47157	116 aa		4.88	□□□□□ -1.63
SPP381	YBR152W	SPO1	P53541	631 aa		4.88	□□□□□ -1.63
SPP381	YBR152W	SSL2	Q00578	843 aa		4.88	□□□□□ -1.63
SPP381	YBR152W	PNS1	Q12412	539 aa		4.88	□□□□□ -1.63
SPP381	YBR152W	KAR1	P11927	433 aa		4.87	□□□□□ -1.63
SPP381	YBR152W	COX11	P19516	300 aa	Known RBP	4.87	□□□□□ -1.63
SPP381	YBR152W	IME1	P21190	360 aa		4.87	□□□□□ -1.63
SPP381	YBR152W	DGR2	P32330	852 aa		4.87	□□□□□ -1.63
SPP381	YBR152W	HEM12	P32347	362 aa	Predicted RBP	4.87	□□□□□ -1.63
SPP381	YBR152W	FAT1	P38225	669 aa		4.87	□□□□□ -1.63
SPP381	YBR152W	ENP1	P38333	483 aa	Known RBP	4.87	□□□□□ -1.63
SPP381	YBR152W	TAF4	P50105	388 aa		4.87	□□□□□ -1.63
SPP381	YBR152W	HLR1	Q04429	423 aa		4.87	□□□□□ -1.63
SPP381	YBR152W	YPS7	Q06325	596 aa		4.87	□□□□□ -1.63
SPP381	YBR152W	STP4	Q07351	490 aa		4.87	□□□□□ -1.63
SPP381	YBR152W	ZRT2	Q12436	422 aa		4.87	□□□□□ -1.63
SPP381	YBR152W	TMA7	Q3E764	64 aa	Known RBP	4.87	□□□□□ -1.63
SPP381	YBR152W	TUF1	P02992	437 aa	Known RBP	4.86	□□□□□ -1.63
SPP381	YBR152W	ABF1	P14164	731 aa		4.86	□□□□□ -1.63
SPP381	YBR152W	CDC26	P14724	124 aa		4.86	□□□□□ -1.63
SPP381	YBR152W	NTH1	P32356	751 aa		4.86	□□□□□ -1.63
SPP381	YBR152W	PLC1	P32383	869 aa		4.86	□□□□□ -1.63
SPP381	YBR152W	SSP120	P39931	234 aa	Known RBP	4.86	□□□□□ -1.63
SPP381	YBR152W	VID28	P40547	921 aa		4.86	□□□□□ -1.63
SPP381	YBR152W	FHN1	P53279	174 aa		4.86	□□□□□ -1.63
SPP381	YBR152W	HOL1	P53389	586 aa		4.86	□□□□□ -1.63
SPP381	YBR152W	HBT1	Q07653	1046 aa	Known RBP	4.86	□□□□□ -1.63
SPP381	YBR152W	ECM3	Q99252	613 aa		4.86	□□□□□ -1.63
SPP381	YBR152W	RPS9B	P05755	195 aa	Known RBP	4.85	□□□□□ -1.63
SPP381	YBR152W	GLN4	P13188	809 aa	Known RBP	4.85	□□□□□ -1.63
SPP381	YBR152W	BCS1	P32839	456 aa		4.85	□□□□□ -1.63
SPP381	YBR152W	OAR1	P35731	278 aa		4.85	□□□□□ -1.63
SPP381	YBR152W	PPS1	P38148	807 aa		4.85	□□□□□ -1.63
SPP381	YBR152W	BUD8	P41698	603 aa		4.85	□□□□□ -1.63
SPP381	YBR152W	PAN2	P53010	1115 aa	Predicted RBP	4.85	□□□□□ -1.63
SPP381	YBR152W	VPS36	Q06696	566 aa		4.85	□□□□□ -1.63
SPP381	YBR152W	FEN2	P25621	512 aa	Known RBP	4.84	□□□□□ -1.63
SPP381	YBR152W	PRE4	P30657	266 aa		4.84	□□□□□ -1.63
SPP381	YBR152W	GRX7	P38068	203 aa		4.84	□□□□□ -1.63
SPP381	YBR152W	YNL195C	P40168	261 aa		4.84	□□□□□ -1.63
SPP381	YBR152W	ARG2	P40360	574 aa		4.84	□□□□□ -1.63
SPP381	YBR152W	PEX8	P53248	589 aa		4.84	□□□□□ -1.63
SPP381	YBR152W	FDC1	Q03034	503 aa		4.84	□□□□□ -1.63
SPP381	YBR152W	RCR2	Q03446	210 aa	Known RBP	4.84	□□□□□ -1.63
SPP381	YBR152W	PHM6	Q05637	104 aa		4.84	□□□□□ -1.63
SPP381	YBR152W	YFT2	Q06676	274 aa		4.84	□□□□□ -1.63
SPP381	YBR152W	SLX4	Q12098	748 aa		4.84	□□□□□ -1.63
SPP381	YBR152W	CHS5	Q12114	671 aa	Known RBP	4.84	□□□□□ -1.63
SPP381	YBR152W	ATP4	P05626	244 aa		4.83	□□□□□ -1.64
SPP381	YBR152W	HCA4	P20448	770 aa	Known RBP	4.83	□□□□□ -1.64
SPP381	YBR152W	SFB3	P38810	929 aa		4.83	□□□□□ -1.64
SPP381	YBR152W	PEA2	P40091	420 aa		4.83	□□□□□ -1.64
SPP381	YBR152W	IRC5	P43610	853 aa		4.83	□□□□□ -1.64
SPP381	YBR152W	ATG4	P53867	494 aa		4.83	□□□□□ -1.64
SPP381	YBR152W	NGL1	Q08213	363 aa	Known RBP	4.83	□□□□□ -1.64
SPP381	YBR152W	MCH5	Q08777	521 aa		4.83	□□□□□ -1.64
SPP381	YBR152W	DAL3	P32459	195 aa		4.82	□□□□□ -1.64
SPP381	YBR152W	SER1	P33330	395 aa	Known RBP	4.82	□□□□□ -1.64
SPP381	YBR152W	PHO11	P35842	467 aa		4.82	□□□□□ -1.64
SPP381	YBR152W	CTP1	P38152	299 aa		4.82	□□□□□ -1.64
SPP381	YBR152W	MOH1	P38191	138 aa		4.82	□□□□□ -1.64
SPP381	YBR152W	COS111	P38308	924 aa		4.82	□□□□□ -1.64
SPP381	YBR152W	PHO12	P38693	467 aa		4.82	□□□□□ -1.64
SPP381	YBR152W	SMX3	P54999	86 aa	Predicted RBP	4.82	□□□□□ -1.64
SPP381	YBR152W	CEF1	Q03654	590 aa	Predicted RBP	4.82	□□□□□ -1.64
SPP381	YBR152W	AIM41	Q12032	185 aa		4.82	□□□□□ -1.64
SPP381	YBR152W	VPS5	Q92331	675 aa		4.82	□□□□□ -1.64
SPP381	YBR152W	TFC4	P33339	1025 aa		4.81	□□□□□ -1.64
SPP381	YBR152W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
SPP381	YBR152W	YIL077C	P40508	320 aa		4.81	□□□□□ -1.64
SPP381	YBR152W	PRM2	P40534	656 aa		4.81	□□□□□ -1.64
SPP381	YBR152W	CTR1	P49573	406 aa		4.81	□□□□□ -1.64
SPP381	YBR152W	PEF1	P53238	335 aa		4.81	□□□□□ -1.64
SPP381	YBR152W	SLI1	P53304	468 aa		4.81	□□□□□ -1.64
SPP381	YBR152W	CNM67	P53865	581 aa	Known RBP	4.81	□□□□□ -1.64
SPP381	YBR152W	IOC4	Q04213	475 aa		4.81	□□□□□ -1.64
SPP381	YBR152W	BMS1	Q08965	1183 aa	Known RBP	4.81	□□□□□ -1.64
SPP381	YBR152W	ATP12	P22135	325 aa		4.8	□□□□□ -1.64
SPP381	YBR152W	CWH43	P25618	953 aa		4.8	□□□□□ -1.64
SPP381	YBR152W	HXT4	P32467	576 aa		4.8	□□□□□ -1.64
SPP381	YBR152W	TAF5	P38129	798 aa		4.8	□□□□□ -1.64
SPP381	YBR152W	PCL5	P38794	229 aa		4.8	□□□□□ -1.64
SPP381	YBR152W	STL1	P39932	569 aa		4.8	□□□□□ -1.64
SPP381	YBR152W	NDC80	P40460	691 aa		4.8	□□□□□ -1.64
SPP381	YBR152W	MPS3	P47069	682 aa		4.8	□□□□□ -1.64
SPP381	YBR152W	PUS4	P48567	403 aa	Known RBP	4.8	□□□□□ -1.64
SPP381	YBR152W	STB4	P50104	949 aa		4.8	□□□□□ -1.64
SPP381	YBR152W	MTD1	Q02046	320 aa	Known RBP	4.8	□□□□□ -1.64
SPP381	YBR152W	YEL076C-A	P0CX16	216 aa		4.79	□□□□□ -1.64
SPP381	YBR152W	YLR464W	P0CX17	216 aa		4.79	□□□□□ -1.64
SPP381	YBR152W	THR1	P17423	357 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms