RNA–Protein interactions for RNA: YBL048W

RRT1, Transcript of Protein of unknown function, yeast

Gene RRT1, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRT1	YBL048W	HOG1	P32485	435 aa		4.27	□□□□□ -1.73
RRT1	YBL048W	APN2	P38207	520 aa		4.27	□□□□□ -1.73
RRT1	YBL048W	CHZ1	P40019	153 aa	Predicted RBP	4.27	□□□□□ -1.73
RRT1	YBL048W	YDR179W-A	Q03983	463 aa		4.27	□□□□□ -1.73
RRT1	YBL048W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
RRT1	YBL048W	RGT1	P32862	1170 aa		4.26	□□□□□ -1.73
RRT1	YBL048W	YGL117W	P53133	265 aa		4.26	□□□□□ -1.73
RRT1	YBL048W	DIP5	P53388	608 aa		4.26	□□□□□ -1.73
RRT1	YBL048W	STP1	Q00947	519 aa		4.26	□□□□□ -1.73
RRT1	YBL048W	NGL2	Q03264	515 aa	Known RBP	4.26	□□□□□ -1.73
RRT1	YBL048W	NSE3	Q05541	303 aa		4.26	□□□□□ -1.73
RRT1	YBL048W	POM34	Q12445	299 aa		4.26	□□□□□ -1.73
RRT1	YBL048W	AI5_ALPHA	Q9ZZX1	630 aa		4.26	□□□□□ -1.73
RRT1	YBL048W	VBA3	P25594	458 aa		4.25	□□□□□ -1.73
RRT1	YBL048W	AKL1	P38080	1108 aa	Known RBP	4.25	□□□□□ -1.73
RRT1	YBL048W	SSZ1	P38788	538 aa	Known RBP	4.25	□□□□□ -1.73
RRT1	YBL048W	YIL077C	P40508	320 aa		4.25	□□□□□ -1.73
RRT1	YBL048W	PSA1	P41940	361 aa	Known RBP	4.25	□□□□□ -1.73
RRT1	YBL048W	PIP2	P52960	996 aa		4.25	□□□□□ -1.73
RRT1	YBL048W	UFO1	Q04511	668 aa		4.25	□□□□□ -1.73
RRT1	YBL048W	YFT2	Q06676	274 aa		4.25	□□□□□ -1.73
RRT1	YBL048W	ERR1	P0CX10	437 aa		4.24	□□□□□ -1.73
RRT1	YBL048W	ERR2	P0CX11	437 aa		4.24	□□□□□ -1.73
RRT1	YBL048W	AAD3	P25612	363 aa		4.24	□□□□□ -1.73
RRT1	YBL048W	NTH1	P32356	751 aa		4.24	□□□□□ -1.73
RRT1	YBL048W	MEP2	P41948	499 aa		4.24	□□□□□ -1.73
RRT1	YBL048W	CPR8	P53728	308 aa		4.24	□□□□□ -1.73
RRT1	YBL048W	IZH3	Q07959	543 aa		4.24	□□□□□ -1.73
RRT1	YBL048W	LEU2	P04173	364 aa	Predicted RBP	4.23	□□□□□ -1.73
RRT1	YBL048W	STE4	P18851	423 aa		4.23	□□□□□ -1.73
RRT1	YBL048W	MNN4	P36044	1178 aa		4.23	□□□□□ -1.73
RRT1	YBL048W	COS111	P38308	924 aa		4.23	□□□□□ -1.73
RRT1	YBL048W	YJR039W	P47107	1121 aa		4.23	□□□□□ -1.73
RRT1	YBL048W	VPS36	Q06696	566 aa		4.23	□□□□□ -1.73
RRT1	YBL048W	CDC53	Q12018	815 aa	Known RBP	4.23	□□□□□ -1.73
RRT1	YBL048W	CIT2	P08679	460 aa		4.22	□□□□□ -1.73
RRT1	YBL048W	GSY1	P23337	708 aa		4.22	□□□□□ -1.73
RRT1	YBL048W	ECM32	P32644	1121 aa	Known RBP	4.22	□□□□□ -1.73
RRT1	YBL048W	ISA1	Q07821	250 aa	Predicted RBP	4.22	□□□□□ -1.73
RRT1	YBL048W	SRD1	P09007	221 aa		4.21	□□□□□ -1.74
RRT1	YBL048W	BIT61	P47041	543 aa		4.21	□□□□□ -1.74
RRT1	YBL048W	ERG20	P08524	352 aa	Known RBP	4.2	□□□□□ -1.74
RRT1	YBL048W	PMA2	P19657	947 aa		4.2	□□□□□ -1.74
RRT1	YBL048W	MEF1	P25039	761 aa		4.2	□□□□□ -1.74
RRT1	YBL048W	COG8	Q04632	607 aa		4.2	□□□□□ -1.74
RRT1	YBL048W	FRE7	Q12333	620 aa		4.2	□□□□□ -1.74
RRT1	YBL048W	KIN82	P25341	720 aa		4.19	□□□□□ -1.74
RRT1	YBL048W	ELF1	P36053	145 aa		4.19	□□□□□ -1.74
RRT1	YBL048W	YHR202W	P38887	602 aa		4.19	□□□□□ -1.74
RRT1	YBL048W	IRC8	P47046	822 aa		4.19	□□□□□ -1.74
RRT1	YBL048W	DAK1	P54838	584 aa	Known RBP	4.19	□□□□□ -1.74
RRT1	YBL048W	ORM2	Q06144	216 aa		4.19	□□□□□ -1.74
RRT1	YBL048W	DCS2	Q12123	353 aa		4.19	□□□□□ -1.74
RRT1	YBL048W	PET127	P32606	800 aa		4.18	□□□□□ -1.74
RRT1	YBL048W	BEM3	P32873	1128 aa		4.18	□□□□□ -1.74
RRT1	YBL048W	ATG33	Q06485	197 aa		4.18	□□□□□ -1.74
RRT1	YBL048W	IRC3	Q06683	689 aa		4.18	□□□□□ -1.74
RRT1	YBL048W	FRS1	P15624	595 aa	Known RBP	4.17	□□□□□ -1.74
RRT1	YBL048W	BEM4	P39011	633 aa		4.17	□□□□□ -1.74
RRT1	YBL048W	DSS1	P39112	969 aa		4.17	□□□□□ -1.74
RRT1	YBL048W	NMD5	P46970	1048 aa		4.17	□□□□□ -1.74
RRT1	YBL048W	GPD1	Q00055	391 aa	Known RBP	4.17	□□□□□ -1.74
RRT1	YBL048W	VHS3	Q08438	674 aa		4.17	□□□□□ -1.74
RRT1	YBL048W	TUP1	P16649	713 aa		4.16	□□□□□ -1.74
RRT1	YBL048W	SEC15	P22224	910 aa		4.16	□□□□□ -1.74
RRT1	YBL048W	NUG1	P40010	520 aa	Known RBP	4.16	□□□□□ -1.74
RRT1	YBL048W	DOT6	P40059	670 aa	Known RBP	4.16	□□□□□ -1.74
RRT1	YBL048W	HMG1	P12683	1054 aa		4.15	□□□□□ -1.75
RRT1	YBL048W	PCL2	P25693	308 aa		4.15	□□□□□ -1.75
RRT1	YBL048W	ATP23	P53722	227 aa		4.15	□□□□□ -1.75
RRT1	YBL048W	YOR131C	Q12486	218 aa		4.15	□□□□□ -1.75
RRT1	YBL048W	RPL7A	P05737	244 aa	Known RBP	4.14	□□□□□ -1.75
RRT1	YBL048W	EUG1	P32474	517 aa		4.14	□□□□□ -1.75
RRT1	YBL048W	PCM1	P38628	557 aa	Known RBP	4.14	□□□□□ -1.75
RRT1	YBL048W	THI6	P41835	540 aa		4.14	□□□□□ -1.75
RRT1	YBL048W	AIM14	P53109	570 aa		4.14	□□□□□ -1.75
RRT1	YBL048W	VBA4	Q04602	768 aa	Known RBP	4.14	□□□□□ -1.75
RRT1	YBL048W	RPL7B	Q12213	244 aa	Known RBP	4.14	□□□□□ -1.75
RRT1	YBL048W	GIN4	Q12263	1142 aa		4.14	□□□□□ -1.75
RRT1	YBL048W	ZPS1	Q12512	249 aa		4.14	□□□□□ -1.75
RRT1	YBL048W	IMG2	P25642	146 aa	Predicted RBP	4.13	□□□□□ -1.75
RRT1	YBL048W	TIM23	P32897	222 aa		4.13	□□□□□ -1.75
RRT1	YBL048W	PIH1	P38768	344 aa		4.13	□□□□□ -1.75
RRT1	YBL048W	UGO1	Q03327	502 aa		4.13	□□□□□ -1.75
RRT1	YBL048W	RCR2	Q03446	210 aa	Known RBP	4.13	□□□□□ -1.75
RRT1	YBL048W	RPN4	Q03465	531 aa		4.13	□□□□□ -1.75
RRT1	YBL048W	TRS23	Q03784	219 aa		4.13	□□□□□ -1.75
RRT1	YBL048W	CPA2	P03965	1118 aa	Known RBP	4.12	□□□□□ -1.75
RRT1	YBL048W	RPS9B	P05755	195 aa	Known RBP	4.12	□□□□□ -1.75
RRT1	YBL048W	MSH2	P25847	964 aa		4.12	□□□□□ -1.75
RRT1	YBL048W	NNF1	P47149	201 aa		4.12	□□□□□ -1.75
RRT1	YBL048W	NOP7	P53261	605 aa	Known RBP	4.12	□□□□□ -1.75
RRT1	YBL048W	IME1	P21190	360 aa		4.11	□□□□□ -1.75
RRT1	YBL048W	RPC34	P32910	317 aa		4.11	□□□□□ -1.75
RRT1	YBL048W	PEX6	P33760	1030 aa		4.11	□□□□□ -1.75
RRT1	YBL048W	RIM4	P38741	713 aa		4.11	□□□□□ -1.75
RRT1	YBL048W	BUD6	P41697	788 aa		4.11	□□□□□ -1.75
RRT1	YBL048W	ATG36	P46983	293 aa		4.11	□□□□□ -1.75
RRT1	YBL048W	YNL018C	P53976	612 aa		4.11	□□□□□ -1.75
RRT1	YBL048W	ERG13	P54839	491 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 122.2 ms