RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 PPP1R42Q7Z4L9 355 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 NUTM1Q86Y26 1132 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 CKAP2LQ8IYA6 745 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 EVI5LQ96CN4 794 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 BPIFA3Q9BQP9 254 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 ANO10Q9NW15 660 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 ARGLU1Q9NWB6 273 aaPredicted RBP4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 HMG20BQ9P0W2 317 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 RCOR1Q9UKL0 485 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 TPCN1Q9ULQ1 816 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 FHOD1Q9Y613 1164 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 V9GYY5 206 aaPredicted RBP4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 LAMA4Q16363 1823 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 DOT1LQ8TEK3 1739 aa4.88□□□□□ -1.63
PTP4A1-205ENST00000626021 ZNF831Q5JPB2 1677 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 NRDCO43847 1150 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 NR1I2O75469 434 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 GCP02774 474 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 CAPN2P17655 700 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 PLA2G4AP47712 749 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 HNRNPH2P55795 449 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 PTH1RQ03431 593 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 RESTQ13127 1097 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 ELF2Q15723 593 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 CREB3L3Q68CJ9 461 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 PRPF40BQ6NWY9 871 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 CWC27Q6UX04 472 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 TREML4Q6UXN2 200 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 TMEM92Q6UXU6 159 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 KRT28Q7Z3Y7 464 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 CCDC150Q8NCX0 1101 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 EFCC1Q9HA90 598 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 IL1RAPL2Q9NP60 686 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 ZNF446Q9NWS9 450 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 HDAC5Q9UQL6 1122 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 COL5A2P05997 1499 aaPredicted RBP4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 SPATA31A3Q5VYP0 1347 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 PHLPP2Q6ZVD8 1323 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 ADCY9O60503 1353 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 USP27XA6NNY8 438 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 BECN2A8MW95 431 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 RPS6KB1P23443 525 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 SNW1Q13573 536 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 AMOTQ4VCS5 1084 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 NBPF6Q5VWK0 638 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 NUTM2GQ5VZR2 741 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 BLOC1S2Q6QNY1 142 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 C14orf37Q86TY3 774 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 CADPS2Q86UW7 1296 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 ERC1Q8IUD2 1116 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 DHX40Q8IX18 779 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 MSL3Q8N5Y2 521 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 IQUBQ8NA54 791 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 IL17REQ8NFR9 667 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 BICD2Q8TD16 824 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 ZNF592Q92610 1267 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 KHSRPQ92945 711 aaKnown RBP eCLIP4.87□□□□□ -1.632e-7■■■□□ 18.2
PTP4A1-205ENST00000626021 GPATCH3Q96I76 525 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 NBPF4Q96M43 638 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 LLPHQ9BRT6 129 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 ECHDC1Q9NTX5 307 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 FEZ2Q9UHY8 353 aaPredicted RBP4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 SPG7Q9UQ90 795 aa4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 RBM8AQ9Y5S9 174 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-205ENST00000626021 LTBP4Q8N2S1 1624 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 KCPQ6ZWJ8 1503 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 SLC27A2O14975 620 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 PNMA6AP0CW24 399 aaPredicted RBP4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 CPA1P15085 419 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 GPS2Q13227 327 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 TOB2Q14106 344 aaPredicted RBP4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 KRT32Q14532 448 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 TAF7Q15545 349 aaPredicted RBP4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 AKAP4Q5JQC9 854 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 CTR9Q6PD62 1173 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 LARP1Q6PKG0 1096 aaKnown RBP4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 TMCO3Q6UWJ1 677 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 FCHSD1Q86WN1 690 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 CLASRPQ8N2M8 674 aaKnown RBP4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 NECAB1Q8N987 351 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 ENGASEQ8NFI3 743 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 SMARCC2Q8TAQ2 1214 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 CHMP4CQ96CF2 233 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 LARP6Q9BRS8 491 aaKnown RBP4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 NAT10Q9H0A0 1025 aaKnown RBP4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 YY1AP1Q9H869 796 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 A0A1B0GUL6 1792 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 NUP98P52948 1817 aa4.86□□□□□ -1.63
PTP4A1-205ENST00000626021 COL5A3P25940 1745 aaPredicted RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 ARAP2Q8WZ64 1704 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 EFCAB8A8MWE9 144 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 MAP4K4O95819 1239 aaPredicted RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 ATF3P18847 181 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 ADD1P35611 737 aaKnown RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 ETF1P62495 437 aaKnown RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 SUZ12Q15022 739 aaKnown RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 ERCC6LQ2NKX8 1250 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 CCDC158Q5M9N0 1113 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 LCE2AQ5TA79 106 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms