RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 CABP4P57796 275 aa6.74□□□□□ -1.33
SEM1-220ENST00000619259 MEI1Q5TIA1 1274 aa6.74□□□□□ -1.33
SEM1-220ENST00000619259 PRPF40BQ6NWY9 871 aaKnown RBP6.74□□□□□ -1.33
SEM1-220ENST00000619259 KANK3Q6NY19 840 aa6.74□□□□□ -1.33
SEM1-220ENST00000619259 C8orf86Q6ZUL3 223 aa6.74□□□□□ -1.33
SEM1-220ENST00000619259 IL22RA1Q8N6P7 574 aa6.74□□□□□ -1.33
SEM1-220ENST00000619259 BSNDQ8WZ55 320 aa6.74□□□□□ -1.33
SEM1-220ENST00000619259 BHLHE41Q9C0J9 482 aaPredicted RBP6.74□□□□□ -1.33
SEM1-220ENST00000619259 SH2B1Q9NRF2 756 aaPredicted RBP6.74□□□□□ -1.33
SEM1-220ENST00000619259 ENAMQ9NRM1 1142 aa6.74□□□□□ -1.33
SEM1-220ENST00000619259 STARD13Q9Y3M8 1113 aa6.74□□□□□ -1.33
SEM1-220ENST00000619259 SYNJ1O43426 1573 aa6.74□□□□□ -1.33
SEM1-220ENST00000619259 TOP2BQ02880 1626 aa6.73□□□□□ -1.33
SEM1-220ENST00000619259 XRCC5P13010 732 aaKnown RBP6.73□□□□□ -1.33
SEM1-220ENST00000619259 CDC27P30260 824 aa6.73□□□□□ -1.33
SEM1-220ENST00000619259 TAF1CQ15572 869 aaPredicted RBP6.73□□□□□ -1.33
SEM1-220ENST00000619259 MUC3BQ9H195 1237 aa6.73□□□□□ -1.33
SEM1-220ENST00000619259 ZFYVE1Q9HBF4 777 aa6.73□□□□□ -1.33
SEM1-220ENST00000619259 GPN3Q9UHW5 284 aaPredicted RBP6.73□□□□□ -1.33
SEM1-220ENST00000619259 BIVM-ERCC5R4GMW8 1640 aa6.72□□□□□ -1.33
SEM1-220ENST00000619259 SCAMP3O14828 347 aaKnown RBP6.72□□□□□ -1.33
SEM1-220ENST00000619259 FBXO24O75426 580 aa6.72□□□□□ -1.33
SEM1-220ENST00000619259 TCF3P15923 654 aa6.72□□□□□ -1.33
SEM1-220ENST00000619259 ZNF157P51786 506 aaPredicted RBP6.72□□□□□ -1.33
SEM1-220ENST00000619259 C9orf131Q5VYM1 1079 aa6.72□□□□□ -1.33
SEM1-220ENST00000619259 TPTE2Q6XPS3 522 aa6.72□□□□□ -1.33
SEM1-220ENST00000619259 WFDC8Q8IUA0 241 aa6.72□□□□□ -1.33
SEM1-220ENST00000619259 TTC9Q92623 222 aa6.72□□□□□ -1.33
SEM1-220ENST00000619259 TNIKQ9UKE5 1360 aa6.71□□□□□ -1.33
SEM1-220ENST00000619259 SOGA1O94964 1423 aa6.71□□□□□ -1.34
SEM1-220ENST00000619259 ZNF76P36508 570 aa6.71□□□□□ -1.34
SEM1-220ENST00000619259 AFF1P51825 1210 aaKnown RBP6.71□□□□□ -1.34
SEM1-220ENST00000619259 FAM117BQ6P1L5 589 aa6.71□□□□□ -1.34
SEM1-220ENST00000619259 TXNDC11Q6PKC3 985 aa6.71□□□□□ -1.34
SEM1-220ENST00000619259 ADAMTSL4Q6UY14 1074 aa6.71□□□□□ -1.34
SEM1-220ENST00000619259 C20orf204Q6ZNR8 217 aa6.71□□□□□ -1.34
SEM1-220ENST00000619259 C3orf58Q8NDZ4 430 aa6.71□□□□□ -1.34
SEM1-220ENST00000619259 SLC7A3Q8WY07 619 aa6.71□□□□□ -1.34
SEM1-220ENST00000619259 LRRC4BQ9NT99 713 aa6.71□□□□□ -1.34
SEM1-220ENST00000619259 PPME1Q9Y570 386 aa6.71□□□□□ -1.34
SEM1-220ENST00000619259 KIF21BO75037 1637 aa6.7□□□□□ -1.34
SEM1-220ENST00000619259 LINC01387J3KSC0 135 aa6.7□□□□□ -1.34
SEM1-220ENST00000619259 ITPKAP23677 461 aa6.7□□□□□ -1.34
SEM1-220ENST00000619259 PCDH1Q08174 1060 aa6.7□□□□□ -1.34
SEM1-220ENST00000619259 IKBKEQ14164 716 aa6.7□□□□□ -1.34
SEM1-220ENST00000619259 CCDC85BQ15834 202 aaPredicted RBP6.7□□□□□ -1.34
SEM1-220ENST00000619259 ZNF385CQ66K41 422 aaPredicted RBP6.7□□□□□ -1.34
SEM1-220ENST00000619259 DMRTC2Q8IXT2 367 aaPredicted RBP6.7□□□□□ -1.34
SEM1-220ENST00000619259 CACTIN-AS1Q8N1I8 211 aa6.7□□□□□ -1.34
SEM1-220ENST00000619259 RNF34Q969K3 372 aa6.7□□□□□ -1.34
SEM1-220ENST00000619259 ADAM19Q9H013 955 aa6.7□□□□□ -1.34
SEM1-220ENST00000619259 CLEC4MQ9H2X3 399 aaPredicted RBP6.7□□□□□ -1.34
SEM1-220ENST00000619259 ZNF576Q9H609 170 aa6.7□□□□□ -1.34
SEM1-220ENST00000619259 USP31Q70CQ4 1352 aa6.69□□□□□ -1.34
SEM1-220ENST00000619259 EPHA1P21709 976 aa6.69□□□□□ -1.34
SEM1-220ENST00000619259 PTPN12Q05209 780 aaKnown RBP6.69□□□□□ -1.34
SEM1-220ENST00000619259 GRIK5Q16478 980 aa6.69□□□□□ -1.34
SEM1-220ENST00000619259 MAP3K11Q16584 847 aa6.69□□□□□ -1.34
SEM1-220ENST00000619259 TRAPPC3LQ5T215 181 aa6.69□□□□□ -1.34
SEM1-220ENST00000619259 MSL1Q68DK7 614 aa6.69□□□□□ -1.34
SEM1-220ENST00000619259 CEP44Q9C0F1 390 aa6.69□□□□□ -1.34
SEM1-220ENST00000619259 GGT7Q9UJ14 662 aa6.69□□□□□ -1.34
SEM1-220ENST00000619259 PPM1HQ9ULR3 514 aa6.69□□□□□ -1.34
SEM1-220ENST00000619259 SOX13Q9UN79 622 aa6.69□□□□□ -1.34
SEM1-220ENST00000619259 PRDM2Q13029 1718 aa6.69□□□□□ -1.34
SEM1-220ENST00000619259 CC2D2AQ9P2K1 1620 aa6.68□□□□□ -1.34
SEM1-220ENST00000619259 GOLGA3Q08378 1498 aa6.68□□□□□ -1.34
SEM1-220ENST00000619259 H3BRJ5 948 aa6.68□□□□□ -1.34
SEM1-220ENST00000619259 ARL4DP49703 201 aa6.68□□□□□ -1.34
SEM1-220ENST00000619259 ST13P50502 369 aaKnown RBP6.68□□□□□ -1.34
SEM1-220ENST00000619259 PPP2R3AQ06190 1150 aa6.68□□□□□ -1.34
SEM1-220ENST00000619259 LDLRAD1Q5T700 205 aa6.68□□□□□ -1.34
SEM1-220ENST00000619259 HS2ST1Q7LGA3 356 aa6.68□□□□□ -1.34
SEM1-220ENST00000619259 VN1R5Q7Z5H4 357 aa6.68□□□□□ -1.34
SEM1-220ENST00000619259 FAM9AQ8IZU1 332 aaPredicted RBP6.68□□□□□ -1.34
SEM1-220ENST00000619259 SEC31BQ9NQW1 1179 aa6.68□□□□□ -1.34
SEM1-220ENST00000619259 CADPSQ9ULU8 1353 aa6.68□□□□□ -1.34
SEM1-220ENST00000619259 CEP164Q9UPV0 1460 aa6.67□□□□□ -1.34
SEM1-220ENST00000619259 F6X3S4 739 aa6.67□□□□□ -1.34
SEM1-220ENST00000619259 ESRRAP11474 423 aaPredicted RBP6.67□□□□□ -1.34
SEM1-220ENST00000619259 ERCC5P28715 1186 aaPredicted RBP6.67□□□□□ -1.34
SEM1-220ENST00000619259 HDLBPQ00341 1268 aaKnown RBP6.67□□□□□ -1.34
SEM1-220ENST00000619259 FANCCQ00597 558 aa6.67□□□□□ -1.34
SEM1-220ENST00000619259 GSTM4Q03013 218 aa6.67□□□□□ -1.34
SEM1-220ENST00000619259 FAAP100Q0VG06 881 aa6.67□□□□□ -1.34
SEM1-220ENST00000619259 ZNF423Q2M1K9 1284 aa6.67□□□□□ -1.34
SEM1-220ENST00000619259 RPS26P11Q5JNZ5 115 aaPredicted RBP6.67□□□□□ -1.34
SEM1-220ENST00000619259 DDX54Q8TDD1 881 aaKnown RBP6.67□□□□□ -1.34
SEM1-220ENST00000619259 CARD10Q9BWT7 1032 aa6.67□□□□□ -1.34
SEM1-220ENST00000619259 METTL5Q9NRN9 209 aaKnown RBP6.67□□□□□ -1.34
SEM1-220ENST00000619259 TMEM39AQ9NV64 488 aa6.67□□□□□ -1.34
SEM1-220ENST00000619259 CUX1P39880 1505 aa6.66□□□□□ -1.34
SEM1-220ENST00000619259 RUSC2Q8N2Y8 1516 aa6.66□□□□□ -1.34
SEM1-220ENST00000619259 SOX1O00570 391 aaPredicted RBP6.66□□□□□ -1.34
SEM1-220ENST00000619259 CELA3AP09093 270 aa6.66□□□□□ -1.34
SEM1-220ENST00000619259 LMNB1P20700 586 aa6.66□□□□□ -1.34
SEM1-220ENST00000619259 BAG6P46379 1132 aa6.66□□□□□ -1.34
SEM1-220ENST00000619259 LCE2AQ5TA79 106 aaPredicted RBP6.66□□□□□ -1.34
SEM1-220ENST00000619259 SV2BQ7L1I2 683 aa6.66□□□□□ -1.34
SEM1-220ENST00000619259 NT5DC4Q86YG4 428 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms