RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 BAG1Q99933 345 aaPredicted RBP12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 ZNF644Q9H582 1327 aaPredicted RBP12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 AKR1B15C9JRZ8 316 aaPredicted RBP12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 ACTN4O43707 911 aaKnown RBP12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 RTN1Q16799 776 aa12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 CFAP70Q5T0N1 1121 aa12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 MIER3Q7Z3K6 550 aa12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 TPX2Q9ULW0 747 aaKnown RBP12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 UBL4BQ8N7F7 174 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 MYD88Q99836 296 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 ZPR1O75312 459 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 MARCKSP29966 332 aaPredicted RBP12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 BICDL1Q6ZP65 573 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 PPANQ9NQ55 473 aaKnown RBP12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 WTAPQ15007 396 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 MCM10Q7L590 875 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 NBPF7P0C2Y1 421 aaPredicted RBP12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 F13A1P00488 732 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 HAND2P61296 217 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 ITIH3Q06033 890 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 NUCB1Q02818 461 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 C8orf74Q6P047 294 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 CNGA1P29973 690 aa12.93□□□□□ -0.34
PCDHA4-204ENST00000618834 EPRSP07814 1512 aaKnown RBP12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 HMGB1P1B2RPK0 211 aaPredicted RBP12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 TRIM27P14373 513 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 RAB11FIP4Q86YS3 637 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 ALG1Q9BT22 464 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 EIF2AK4Q9P2K8 1649 aaKnown RBP12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 TXNDC9O14530 226 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 MGEA5O60502 916 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 UTP14CQ5TAP6 766 aaKnown RBP12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 CCDC65Q8IXS2 484 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 CCDC8Q9H0W5 538 aaPredicted RBP12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 DNM1Q05193 864 aaKnown RBP12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 PAXIP1Q6ZW49 1069 aaPredicted RBP12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 HEATR3Q7Z4Q2 680 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 RTL9Q8NET4 1388 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 E7EVH7 732 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 ZBTB43O43298 467 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 VAT1LQ9HCJ6 419 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 DACT1Q9NYF0 836 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 CTNND2Q9UQB3 1225 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 TRIM68Q6AZZ1 485 aa12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
PCDHA4-204ENST00000618834 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 ZC3H6P61129 1189 aaKnown RBP12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 COG7P83436 770 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 SKAP1Q86WV1 359 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 PNMA8AQ86V59 439 aaPredicted RBP12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 C11orf95C9JLR9 678 aaPredicted RBP12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 BAG3O95817 575 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 IRX4P78413 519 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 TRIM14Q14142 442 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 DENND2CQ68D51 928 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 RASSF2P50749 326 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 IFIT1BQ5T764 474 aaKnown RBP12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 CNNM2Q9H8M5 875 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 ELF2Q15723 593 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 AP1ARQ63HQ0 302 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 HVCN1Q96D96 273 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 SPTLC2O15270 562 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 ERCC5P28715 1186 aaPredicted RBP12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 MAP3K21Q5TCX8 1036 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 RUFY4Q6ZNE9 571 aa12.91□□□□□ -0.34
PCDHA4-204ENST00000618834 PPFIA1Q13136 1202 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 RILPL1Q5EBL4 403 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 CYP26C1Q6V0L0 522 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 RPGRQ92834 1020 aaKnown RBP12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 WDHD1O75717 1129 aaPredicted RBP12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 PSMD6Q15008 389 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 AEBP2Q6ZN18 517 aaPredicted RBP12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 STK10O94804 968 aaKnown RBP12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 FLIIQ13045 1269 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 TSHZ3Q63HK5 1081 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 AGTPBP1Q9UPW5 1226 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 MCM7P33993 719 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 RUFY3Q7L099 469 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 MYRIPQ8NFW9 859 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 HLA-DOAP06340 250 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 WDR78Q5VTH9 848 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 TRMT1LQ7Z2T5 733 aaKnown RBP12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 CROCCP2Q86T23 111 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 RAB3GAP1Q15042 981 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 SNX21Q969T3 373 aa12.9□□□□□ -0.34
PCDHA4-204ENST00000618834 KRT2P35908 639 aa12.9□□□□□ -0.35
PCDHA4-204ENST00000618834 NECAB1Q8N987 351 aa12.9□□□□□ -0.35
PCDHA4-204ENST00000618834 U2AF2P26368 475 aaKnown RBP eCLIP12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 Q9H521 79 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 XAB2Q9HCS7 855 aaKnown RBP12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 BCAP29Q9UHQ4 241 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 FRMD4BQ9Y2L6 1034 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 RALGAPBQ86X10 1494 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms