RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 LUC7L2Q9Y383 392 aaKnown RBP10.83□□□□□ -0.68
CSMD1-217ENST00000602723 RBM8AQ9Y5S9 174 aaKnown RBP10.83□□□□□ -0.68
CSMD1-217ENST00000602723 EMILIN1Q9Y6C2 1016 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 DNMBPQ6XZF7 1577 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 CALML3P27482 149 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 CCDC122Q5T0U0 273 aa10.83□□□□□ -0.68
CSMD1-217ENST00000602723 ATP5J2-PTCD1G3V325 749 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 CABP5Q9NP86 173 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 BUB1BO60566 1050 aaPredicted RBP10.82□□□□□ -0.68
CSMD1-217ENST00000602723 MCMDC2Q4G0Z9 681 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 KRT2P35908 639 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 GNAQP50148 359 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 SYT10Q6XYQ8 523 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 MSANTD4Q8NCY6 345 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 CALM1P0DP23 149 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 CALM2P0DP24 149 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 CALM3P0DP25 149 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 PCK1P35558 622 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 LDHAL6AQ6ZMR3 332 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 MAK16Q9BXY0 300 aaKnown RBP10.82□□□□□ -0.68
CSMD1-217ENST00000602723 TLDC2A0PJX2 215 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 VIMP08670 466 aaKnown RBP10.82□□□□□ -0.68
CSMD1-217ENST00000602723 SEL1L2Q5TEA6 688 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 PPFIBP2Q8ND30 876 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 PPP1R9BQ96SB3 815 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 FAM13AO94988 1023 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 FAM184BQ9ULE4 1060 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 PDE1AP54750 535 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 FAM160A1Q05DH4 1040 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 CEP85LQ5SZL2 805 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 C6orf50Q9HD87 102 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 CALCOCO2Q13137 446 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 CEP128Q6ZU80 1094 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 CACNA2D3Q8IZS8 1091 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 GPR161Q8N6U8 529 aaKnown RBP10.82□□□□□ -0.68
CSMD1-217ENST00000602723 SNX16P57768 344 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 BRAPQ7Z569 592 aa10.82□□□□□ -0.68
CSMD1-217ENST00000602723 FYB2Q5VWT5 728 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 MTUS1Q9ULD2 1270 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 WAPLQ7Z5K2 1190 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 NPHP3Q7Z494 1330 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 AKR1B15C9JRZ8 316 aaPredicted RBP10.81□□□□□ -0.68
CSMD1-217ENST00000602723 CLNS1AP54105 237 aaKnown RBP10.81□□□□□ -0.68
CSMD1-217ENST00000602723 FMNL3Q8IVF7 1028 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 EPSTI1Q96J88 318 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 BAG1Q99933 345 aaPredicted RBP10.81□□□□□ -0.68
CSMD1-217ENST00000602723 RHPN1Q8TCX5 695 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 VCX3BQ9H321 246 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
CSMD1-217ENST00000602723 ABCC5O15440 1437 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 TSNAXIP1Q2TAA8 658 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 SEPT14Q6ZU15 432 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 CCT6AP40227 531 aaKnown RBP10.81□□□□□ -0.68
CSMD1-217ENST00000602723 EVCP57679 992 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 POTEDQ86YR6 584 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 CCDC26Q8TAB7 109 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.81□□□□□ -0.68
CSMD1-217ENST00000602723 CTNND2Q9UQB3 1225 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 ELP1O95163 1332 aa10.81□□□□□ -0.68
CSMD1-217ENST00000602723 LMNTD2Q8IXW0 634 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 UQCRFS1P1P0C7P4 283 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 INF2Q27J81 1249 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 SMAP1Q8IYB5 467 aaPredicted RBP10.8□□□□□ -0.68
CSMD1-217ENST00000602723 ZGPATQ8N5A5 531 aaKnown RBP10.8□□□□□ -0.68
CSMD1-217ENST00000602723 SLC4A4Q9Y6R1 1079 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 SH3BP5O60239 455 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 IGSF3O75054 1194 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 DPH6Q7L8W6 267 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 CCDC152Q4G0S7 254 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 CRCPO75575 148 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 HSPA1LP34931 641 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 ERO1AQ96HE7 468 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 MRC2Q9UBG0 1479 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 UTP11Q9Y3A2 253 aaKnown RBP10.8□□□□□ -0.68
CSMD1-217ENST00000602723 UAP1Q16222 522 aaPredicted RBP10.8□□□□□ -0.68
CSMD1-217ENST00000602723 CCDC62Q6P9F0 684 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 CHPF2Q9P2E5 772 aa10.8□□□□□ -0.68
CSMD1-217ENST00000602723 GOLGA6CA6NDK9 693 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 GOLGA6DP0CG33 693 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 NAPGQ99747 312 aaPredicted RBP10.79□□□□□ -0.68
CSMD1-217ENST00000602723 GOLGA6AQ9NYA3 693 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 NDUFAB1O14561 156 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 STX17P56962 302 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 FRMD4BQ9Y2L6 1034 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 INPP5BP32019 993 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 MCM7P33993 719 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 ERCC6LQ2NKX8 1250 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 PAG1Q9NWQ8 432 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.79□□□□□ -0.68
CSMD1-217ENST00000602723 FAM83GA6ND36 823 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 CYP7A1P22680 504 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 HS2ST1Q7LGA3 356 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 ARHGAP45Q92619 1136 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 SPDYE3A6NKU9 549 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 GAS8O95995 478 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 UTP14CQ5TAP6 766 aaKnown RBP10.79□□□□□ -0.68
CSMD1-217ENST00000602723 DISP3Q9P2K9 1392 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 KDM5AP29375 1690 aaKnown RBP10.79□□□□□ -0.68
CSMD1-217ENST00000602723 SNAPC4Q5SXM2 1469 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms