RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 GOLPH3LQ9H4A5 285 aa23.02■■□□□ 1.28
GRAMD1A-207ENST00000598118 ZBTB1Q9Y2K1 713 aa23.02■■□□□ 1.28
GRAMD1A-207ENST00000598118 GPAA1O43292 621 aa23.01■■□□□ 1.27
GRAMD1A-207ENST00000598118 CTSWP56202 376 aa23.01■■□□□ 1.27
GRAMD1A-207ENST00000598118 ANTXR2P58335 489 aa23.01■■□□□ 1.27
GRAMD1A-207ENST00000598118 KIF3AQ9Y496 699 aa23.01■■□□□ 1.27
GRAMD1A-207ENST00000598118 LRP6O75581 1613 aa23.01■■□□□ 1.27
GRAMD1A-207ENST00000598118 DDX60Q8IY21 1712 aaKnown RBP23.01■■□□□ 1.27
GRAMD1A-207ENST00000598118 BCL9O00512 1426 aa23.01■■□□□ 1.27
GRAMD1A-207ENST00000598118 UQCRHLA0A096LP55 91 aa23.01■■□□□ 1.27
GRAMD1A-207ENST00000598118 UQCRHP07919 91 aa23.01■■□□□ 1.27
GRAMD1A-207ENST00000598118 VGLL2Q8N8G2 317 aa23.01■■□□□ 1.27
GRAMD1A-207ENST00000598118 ABCC12Q96J65 1359 aa23■■□□□ 1.27
GRAMD1A-207ENST00000598118 PRC1O43663 620 aa23■■□□□ 1.27
GRAMD1A-207ENST00000598118 HSP90AA2PQ14568 343 aaPredicted RBP23■■□□□ 1.27
GRAMD1A-207ENST00000598118 DNAJC25Q9H1X3 360 aa23■■□□□ 1.27
GRAMD1A-207ENST00000598118 IRS4O14654 1257 aaPredicted RBP22.99■■□□□ 1.27
GRAMD1A-207ENST00000598118 OTUD7BQ6GQQ9 843 aa22.99■■□□□ 1.27
GRAMD1A-207ENST00000598118 SASS6Q6UVJ0 657 aa22.99■■□□□ 1.27
GRAMD1A-207ENST00000598118 CCAR1Q8IX12 1150 aaKnown RBP22.99■■□□□ 1.27
GRAMD1A-207ENST00000598118 HPS5Q9UPZ3 1129 aa22.99■■□□□ 1.27
GRAMD1A-207ENST00000598118 RAB11FIP4Q86YS3 637 aa22.99■■□□□ 1.27
GRAMD1A-207ENST00000598118 NKX2-3Q8TAU0 364 aa22.99■■□□□ 1.27
GRAMD1A-207ENST00000598118 CNNM1Q9NRU3 951 aa22.99■■□□□ 1.27
GRAMD1A-207ENST00000598118 DENND2AQ9ULE3 1009 aa22.99■■□□□ 1.27
GRAMD1A-207ENST00000598118 ANKRD18BA2A2Z9 1011 aa22.98■■□□□ 1.27
GRAMD1A-207ENST00000598118 RRP9O43818 475 aaKnown RBP22.98■■□□□ 1.27
GRAMD1A-207ENST00000598118 SNW1Q13573 536 aaKnown RBP22.98■■□□□ 1.27
GRAMD1A-207ENST00000598118 TRMT112Q9UI30 125 aaKnown RBP22.98■■□□□ 1.27
GRAMD1A-207ENST00000598118 DISP2A7MBM2 1401 aa22.98■■□□□ 1.27
GRAMD1A-207ENST00000598118 NBPF3Q9H094 633 aa22.98■■□□□ 1.27
GRAMD1A-207ENST00000598118 PYCARDQ9ULZ3 195 aa22.98■■□□□ 1.27
GRAMD1A-207ENST00000598118 KLF18A0A0U1RQI7 1052 aa22.97■■□□□ 1.27
GRAMD1A-207ENST00000598118 ADD2P35612 726 aa22.97■■□□□ 1.27
GRAMD1A-207ENST00000598118 ZNF165P49910 485 aa22.97■■□□□ 1.27
GRAMD1A-207ENST00000598118 TBC1D2BQ9UPU7 963 aa22.97■■□□□ 1.27
GRAMD1A-207ENST00000598118 ZNF213O14771 459 aa22.97■■□□□ 1.27
GRAMD1A-207ENST00000598118 TDRD7Q8NHU6 1098 aaKnown RBP22.97■■□□□ 1.27
GRAMD1A-207ENST00000598118 NCOA7Q8NI08 942 aa22.97■■□□□ 1.27
GRAMD1A-207ENST00000598118 ZNF396Q96N95 335 aaPredicted RBP22.97■■□□□ 1.27
GRAMD1A-207ENST00000598118 PIH1D3Q9NQM4 214 aaKnown RBP22.97■■□□□ 1.27
GRAMD1A-207ENST00000598118 SPTLC3Q9NUV7 552 aa22.97■■□□□ 1.27
GRAMD1A-207ENST00000598118 SLC9C2Q5TAH2 1124 aa22.96■■□□□ 1.27
GRAMD1A-207ENST00000598118 ENGASEQ8NFI3 743 aa22.96■■□□□ 1.27
GRAMD1A-207ENST00000598118 UBN2Q6ZU65 1347 aa22.96■■□□□ 1.27
GRAMD1A-207ENST00000598118 PDE8BO95263 885 aa22.96■■□□□ 1.27
GRAMD1A-207ENST00000598118 DNTTIP2Q5QJE6 756 aaKnown RBP22.96■■□□□ 1.27
GRAMD1A-207ENST00000598118 ATL3Q6DD88 541 aa22.96■■□□□ 1.27
GRAMD1A-207ENST00000598118 KIAA1524Q8TCG1 905 aa22.96■■□□□ 1.27
GRAMD1A-207ENST00000598118 SYTL4Q96C24 671 aaPredicted RBP22.96■■□□□ 1.27
GRAMD1A-207ENST00000598118 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.95■■□□□ 1.26
GRAMD1A-207ENST00000598118 GOLGA8BA8MQT2 603 aa22.95■■□□□ 1.26
GRAMD1A-207ENST00000598118 RBM10P98175 930 aaKnown RBP22.95■■□□□ 1.26
GRAMD1A-207ENST00000598118 ZNF512BQ96KM6 892 aaPredicted RBP22.95■■□□□ 1.26
GRAMD1A-207ENST00000598118 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.95■■□□□ 1.261e-7■■■■■ 28
GRAMD1A-207ENST00000598118 GJB4Q9NTQ9 266 aa22.95■■□□□ 1.26
GRAMD1A-207ENST00000598118 PHKA1P46020 1223 aa22.94■■□□□ 1.26
GRAMD1A-207ENST00000598118 SLIT2O94813 1529 aa22.94■■□□□ 1.26
GRAMD1A-207ENST00000598118 PDE8AO60658 829 aa22.94■■□□□ 1.26
GRAMD1A-207ENST00000598118 PTGS1P23219 599 aa22.94■■□□□ 1.26
GRAMD1A-207ENST00000598118 CCDC102BQ68D86 513 aa22.94■■□□□ 1.26
GRAMD1A-207ENST00000598118 C11orf57Q6ZUT1 292 aaPredicted RBP22.94■■□□□ 1.26
GRAMD1A-207ENST00000598118 RALYLQ86SE5 291 aaKnown RBP22.94■■□□□ 1.26
GRAMD1A-207ENST00000598118 PLA2G4DQ86XP0 818 aa22.94■■□□□ 1.26
GRAMD1A-207ENST00000598118 ME1P48163 572 aa22.93■■□□□ 1.26
GRAMD1A-207ENST00000598118 DZIP3Q86Y13 1208 aaKnown RBP22.93■■□□□ 1.26
GRAMD1A-207ENST00000598118 HELBQ8NG08 1087 aaPredicted RBP22.93■■□□□ 1.26
GRAMD1A-207ENST00000598118 CHMP4CQ96CF2 233 aa22.93■■□□□ 1.26
GRAMD1A-207ENST00000598118 C4AP0C0L4 1744 aa22.93■■□□□ 1.26
GRAMD1A-207ENST00000598118 C4BP0C0L5 1744 aa22.93■■□□□ 1.26
GRAMD1A-207ENST00000598118 A0A087WWV3 80 aa22.93■■□□□ 1.26
GRAMD1A-207ENST00000598118 IDH1O75874 414 aaKnown RBP22.93■■□□□ 1.26
GRAMD1A-207ENST00000598118 ZNF75DP51815 510 aa22.93■■□□□ 1.26
GRAMD1A-207ENST00000598118 TBC1D10CQ8IV04 446 aa22.93■■□□□ 1.26
GRAMD1A-207ENST00000598118 PCDHA7Q9UN72 937 aa22.93■■□□□ 1.26
GRAMD1A-207ENST00000598118 GOLGA6L6A8MZA4 724 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 IQCB1Q15051 598 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 C8orf76Q96K31 380 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 TRIM5Q9C035 493 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 ORC3Q9UBD5 711 aaPredicted RBP22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 NRBP1Q9UHY1 535 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 POLR3DP05423 398 aaPredicted RBP22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 TPM3P06753 285 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 FAM160A1Q05DH4 1040 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 CCDC73Q6ZRK6 1079 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 FSIP1Q8NA03 581 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 FBXO18Q8NFZ0 1043 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 RTEL1Q9NZ71 1219 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 WWC3Q9ULE0 1092 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 ATRNO75882 1429 aa22.92■■□□□ 1.26
GRAMD1A-207ENST00000598118 ZNF532Q9HCE3 1301 aa22.91■■□□□ 1.26
GRAMD1A-207ENST00000598118 ZSCAN25Q6NSZ9 544 aa22.91■■□□□ 1.26
GRAMD1A-207ENST00000598118 CYB5R4Q7L1T6 521 aa22.91■■□□□ 1.26
GRAMD1A-207ENST00000598118 ZNF34Q8IZ26 560 aa22.91■■□□□ 1.26
GRAMD1A-207ENST00000598118 CLIC4Q9Y696 253 aa22.91■■□□□ 1.26
GRAMD1A-207ENST00000598118 CTAGE5O15320 804 aa22.91■■□□□ 1.26
GRAMD1A-207ENST00000598118 ARID4AP29374 1257 aaPredicted RBP22.91■■□□□ 1.26
GRAMD1A-207ENST00000598118 TTF1Q15361 905 aaPredicted RBP22.91■■□□□ 1.26
GRAMD1A-207ENST00000598118 UBE3CQ15386 1083 aa22.91■■□□□ 1.26
GRAMD1A-207ENST00000598118 ERCC4Q92889 916 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms