RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 BTG4Q9NY30 223 aa23.45■■□□□ 1.35
MSLN-205ENST00000563941 TPM3P06753 285 aa23.45■■□□□ 1.34
MSLN-205ENST00000563941 CTSWP56202 376 aa23.45■■□□□ 1.34
MSLN-205ENST00000563941 DDX60Q8IY21 1712 aaKnown RBP23.45■■□□□ 1.34
MSLN-205ENST00000563941 GOLGA6L6A8MZA4 724 aa23.44■■□□□ 1.34
MSLN-205ENST00000563941 GPAA1O43292 621 aa23.44■■□□□ 1.34
MSLN-205ENST00000563941 PRC1O43663 620 aa23.44■■□□□ 1.34
MSLN-205ENST00000563941 FDPSP14324 419 aaKnown RBP23.44■■□□□ 1.34
MSLN-205ENST00000563941 MCAMP43121 646 aa23.44■■□□□ 1.34
MSLN-205ENST00000563941 MB21D2Q8IYB1 491 aaPredicted RBP23.44■■□□□ 1.34
MSLN-205ENST00000563941 ANKRD18BA2A2Z9 1011 aa23.44■■□□□ 1.34
MSLN-205ENST00000563941 DNTTIP2Q5QJE6 756 aaKnown RBP23.44■■□□□ 1.34
MSLN-205ENST00000563941 CCAR1Q8IX12 1150 aaKnown RBP23.44■■□□□ 1.34
MSLN-205ENST00000563941 C17orf53Q8N3J3 647 aaPredicted RBP23.44■■□□□ 1.34
MSLN-205ENST00000563941 CYP19A1P11511 503 aaPredicted RBP23.43■■□□□ 1.34
MSLN-205ENST00000563941 ILDR1Q86SU0 546 aaPredicted RBP23.43■■□□□ 1.34
MSLN-205ENST00000563941 SLC4A9Q96Q91 983 aa23.43■■□□□ 1.34
MSLN-205ENST00000563941 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.43■■□□□ 1.34
MSLN-205ENST00000563941 DNAJC25Q9H1X3 360 aa23.43■■□□□ 1.34
MSLN-205ENST00000563941 KCNF1Q9H3M0 494 aa23.43■■□□□ 1.34
MSLN-205ENST00000563941 CNNM1Q9NRU3 951 aa23.43■■□□□ 1.34
MSLN-205ENST00000563941 BCL9O00512 1426 aa23.43■■□□□ 1.34
MSLN-205ENST00000563941 TDRD7Q8NHU6 1098 aaKnown RBP23.42■■□□□ 1.34
MSLN-205ENST00000563941 NCOA7Q8NI08 942 aa23.42■■□□□ 1.34
MSLN-205ENST00000563941 GOLPH3LQ9H4A5 285 aa23.42■■□□□ 1.34
MSLN-205ENST00000563941 IRS4O14654 1257 aaPredicted RBP23.42■■□□□ 1.34
MSLN-205ENST00000563941 ZNF165P49910 485 aa23.42■■□□□ 1.34
MSLN-205ENST00000563941 SPTLC3Q9NUV7 552 aa23.42■■□□□ 1.34
MSLN-205ENST00000563941 DISP2A7MBM2 1401 aa23.42■■□□□ 1.34
MSLN-205ENST00000563941 NUP98P52948 1817 aa23.42■■□□□ 1.34
MSLN-205ENST00000563941 KLF18A0A0U1RQI7 1052 aa23.41■■□□□ 1.34
MSLN-205ENST00000563941 ZNF213O14771 459 aa23.41■■□□□ 1.34
MSLN-205ENST00000563941 ANTXR2P58335 489 aa23.41■■□□□ 1.34
MSLN-205ENST00000563941 RALYLQ86SE5 291 aaKnown RBP23.41■■□□□ 1.34
MSLN-205ENST00000563941 VGLL2Q8N8G2 317 aa23.41■■□□□ 1.34
MSLN-205ENST00000563941 ZBTB1Q9Y2K1 713 aa23.41■■□□□ 1.34
MSLN-205ENST00000563941 GOLGA8BA8MQT2 603 aa23.41■■□□□ 1.34
MSLN-205ENST00000563941 ADD2P35612 726 aa23.41■■□□□ 1.34
MSLN-205ENST00000563941 ZSCAN25Q6NSZ9 544 aa23.41■■□□□ 1.34
MSLN-205ENST00000563941 CCDC73Q6ZRK6 1079 aa23.41■■□□□ 1.34
MSLN-205ENST00000563941 ZNF512BQ96KM6 892 aaPredicted RBP23.41■■□□□ 1.34
MSLN-205ENST00000563941 TRMT112Q9UI30 125 aaKnown RBP23.41■■□□□ 1.34
MSLN-205ENST00000563941 CTAGE5O15320 804 aa23.4■■□□□ 1.34
MSLN-205ENST00000563941 HPS5Q9UPZ3 1129 aa23.4■■□□□ 1.34
MSLN-205ENST00000563941 KAT6BQ8WYB5 2073 aa23.4■■□□□ 1.34
MSLN-205ENST00000563941 CAVIN2O95810 425 aa23.39■■□□□ 1.34
MSLN-205ENST00000563941 MYO5AQ9Y4I1 1855 aaKnown RBP23.39■■□□□ 1.34
MSLN-205ENST00000563941 ATRNO75882 1429 aa23.39■■□□□ 1.33
MSLN-205ENST00000563941 DHX16O60231 1041 aaKnown RBP23.39■■□□□ 1.33
MSLN-205ENST00000563941 SNW1Q13573 536 aaKnown RBP23.39■■□□□ 1.33
MSLN-205ENST00000563941 TTF1Q15361 905 aaPredicted RBP23.39■■□□□ 1.33
MSLN-205ENST00000563941 KIAA1524Q8TCG1 905 aa23.39■■□□□ 1.33
MSLN-205ENST00000563941 PYCARDQ9ULZ3 195 aa23.39■■□□□ 1.33
MSLN-205ENST00000563941 WDR19Q8NEZ3 1342 aa23.38■■□□□ 1.33
MSLN-205ENST00000563941 PDE8AO60658 829 aa23.38■■□□□ 1.33
MSLN-205ENST00000563941 ME1P48163 572 aa23.38■■□□□ 1.33
MSLN-205ENST00000563941 SLC9C2Q5TAH2 1124 aa23.38■■□□□ 1.33
MSLN-205ENST00000563941 PDE8BO95263 885 aa23.38■■□□□ 1.33
MSLN-205ENST00000563941 ZNF75DP51815 510 aa23.38■■□□□ 1.33
MSLN-205ENST00000563941 FAM160A1Q05DH4 1040 aa23.38■■□□□ 1.33
MSLN-205ENST00000563941 PLA2G4DQ86XP0 818 aa23.38■■□□□ 1.33
MSLN-205ENST00000563941 C8orf76Q96K31 380 aa23.38■■□□□ 1.33
MSLN-205ENST00000563941 TRIM5Q9C035 493 aa23.38■■□□□ 1.33
MSLN-205ENST00000563941 PIH1D3Q9NQM4 214 aaKnown RBP23.38■■□□□ 1.33
MSLN-205ENST00000563941 OTUD7BQ6GQQ9 843 aa23.37■■□□□ 1.33
MSLN-205ENST00000563941 ENGASEQ8NFI3 743 aa23.37■■□□□ 1.33
MSLN-205ENST00000563941 NBPF3Q9H094 633 aa23.37■■□□□ 1.33
MSLN-205ENST00000563941 DYNC1I1O14576 645 aa23.36■■□□□ 1.33
MSLN-205ENST00000563941 KINO60870 393 aaKnown RBP23.36■■□□□ 1.33
MSLN-205ENST00000563941 PTGS1P23219 599 aa23.36■■□□□ 1.33
MSLN-205ENST00000563941 RAB11FIP4Q86YS3 637 aa23.36■■□□□ 1.33
MSLN-205ENST00000563941 FSIP1Q8NA03 581 aa23.36■■□□□ 1.33
MSLN-205ENST00000563941 RTEL1Q9NZ71 1219 aa23.36■■□□□ 1.33
MSLN-205ENST00000563941 ORC3Q9UBD5 711 aaPredicted RBP23.36■■□□□ 1.33
MSLN-205ENST00000563941 COL14A1Q05707 1796 aaKnown RBP23.36■■□□□ 1.33
MSLN-205ENST00000563941 C4AP0C0L4 1744 aa23.36■■□□□ 1.33
MSLN-205ENST00000563941 C4BP0C0L5 1744 aa23.36■■□□□ 1.33
MSLN-205ENST00000563941 STX1AQ16623 288 aa23.36■■□□□ 1.33
MSLN-205ENST00000563941 DZIP3Q86Y13 1208 aaKnown RBP23.36■■□□□ 1.33
MSLN-205ENST00000563941 SYTL4Q96C24 671 aaPredicted RBP23.36■■□□□ 1.33
MSLN-205ENST00000563941 ERVV-1B6SEH8 477 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 CPLX1O14810 134 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 IDH1O75874 414 aaKnown RBP23.35■■□□□ 1.33
MSLN-205ENST00000563941 PHKA1P46020 1223 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 RBM10P98175 930 aaKnown RBP23.35■■□□□ 1.33
MSLN-205ENST00000563941 UBE3CQ15386 1083 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 CCDC102BQ68D86 513 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 C11orf57Q6ZUT1 292 aaPredicted RBP23.35■■□□□ 1.33
MSLN-205ENST00000563941 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.35■■□□□ 1.33
MSLN-205ENST00000563941 TBC1D2BQ9UPU7 963 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 PLCH1Q4KWH8 1693 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 LRP5O75197 1615 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 UBN2Q6ZU65 1347 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 ARID4AP29374 1257 aaPredicted RBP23.35■■□□□ 1.33
MSLN-205ENST00000563941 DRC7Q8IY82 874 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 FBXO18Q8NFZ0 1043 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 PCDHA7Q9UN72 937 aa23.35■■□□□ 1.33
MSLN-205ENST00000563941 TRDNQ13061 729 aa23.34■■□□□ 1.33
MSLN-205ENST00000563941 IQCB1Q15051 598 aa23.34■■□□□ 1.33
MSLN-205ENST00000563941 TBC1D10CQ8IV04 446 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms