RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 TMEM102Q8N9M5 508 aaPredicted RBP5.79□□□□□ -1.48
SHCBP1-202ENST00000563219 NXPE3Q969Y0 559 aa5.79□□□□□ -1.48
SHCBP1-202ENST00000563219 FAM46AQ96IP4 442 aaKnown RBP5.79□□□□□ -1.48
SHCBP1-202ENST00000563219 HHIPQ96QV1 700 aa5.79□□□□□ -1.48
SHCBP1-202ENST00000563219 BIN2Q9UBW5 565 aaPredicted RBP5.79□□□□□ -1.48
SHCBP1-202ENST00000563219 GSC2O15499 205 aa5.78□□□□□ -1.48
SHCBP1-202ENST00000563219 IGLV1-40P01703 118 aa5.78□□□□□ -1.48
SHCBP1-202ENST00000563219 OSMRQ99650 979 aa5.78□□□□□ -1.48
SHCBP1-202ENST00000563219 SOX13Q9UN79 622 aa5.78□□□□□ -1.48
SHCBP1-202ENST00000563219 EREGO14944 169 aa5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 PHACTR2O75167 634 aa5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 EDN3P14138 238 aa5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 TMCO4Q5TGY1 634 aa5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 UBASH3BQ8TF42 649 aa5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 BSNDQ8WZ55 320 aa5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 UTP4Q969X6 686 aaKnown RBP5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 MYRFLQ96LU7 910 aa5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 CITED4Q96RK1 184 aa5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 ZKSCAN3Q9BRR0 538 aa5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 CCDC87Q9NVE4 849 aa5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 DCTN4Q9UJW0 460 aa5.77□□□□□ -1.49
SHCBP1-202ENST00000563219 MEGF11A6BM72 1044 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 SOX1O00570 391 aaPredicted RBP5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 NDUFB5O43674 189 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 ARL4DP49703 201 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 C19orf57Q0VDD7 668 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 ANKRD34AQ69YU3 496 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 VN1R5Q7Z5H4 357 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 GJD3Q8N144 294 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 SNX29Q8TEQ0 813 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 SLC7A3Q8WY07 619 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 RBCK1Q9BYM8 510 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 RNF208Q9H0X6 261 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 FOXD3Q9UJU5 478 aaPredicted RBP5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 BRPF3Q9ULD4 1205 aa5.76□□□□□ -1.49
SHCBP1-202ENST00000563219 SSTR4P31391 388 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 CD97P48960 835 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 NLRP12P59046 1061 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 NFIAQ12857 509 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 CCDC27Q2M243 656 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 HGSNATQ68CP4 663 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 CLEC10AQ8IUN9 316 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 TRIM42Q8IWZ5 723 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 FAM20CQ8IXL6 584 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 C7orf69Q9H7B7 122 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 ZFYVE28Q9HCC9 887 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 PCMTD2Q9NV79 361 aa5.75□□□□□ -1.49
SHCBP1-202ENST00000563219 HMX2A2RU54 273 aa5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 SART1O43290 800 aaKnown RBP5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 IGHA2P01877 340 aa5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 IKBKEQ14164 716 aa5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 PEAR1Q5VY43 1037 aaPredicted RBP5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 RNF43Q68DV7 783 aa5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 DNAJC14Q6Y2X3 702 aaPredicted RBP5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 ZDHHC13Q8IUH4 622 aa5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 FAM129BQ96TA1 746 aa5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 FAM83CQ9BQN1 747 aa5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 RUSC1Q9BVN2 902 aa5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 BHLHE41Q9C0J9 482 aaPredicted RBP5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 AMOTL2Q9Y2J4 779 aa5.74□□□□□ -1.49
SHCBP1-202ENST00000563219 COBLO75128 1261 aa5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 MED26O95402 600 aa5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 BMP3P12645 472 aa5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 MAPK1P28482 360 aa5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 PREPP48147 710 aa5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 PDE3BQ13370 1112 aa5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 DMRTB1Q96MA1 342 aa5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 ASB16Q96NS5 453 aa5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 SOX17Q9H6I2 414 aaPredicted RBP5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 LATS2Q9NRM7 1088 aa5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 HIF3AQ9Y2N7 669 aa5.73□□□□□ -1.49
SHCBP1-202ENST00000563219 TGFB1P01137 390 aa5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 ESRRAP11474 423 aaPredicted RBP5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 MFAP1P55081 439 aaKnown RBP5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 NUTM2GQ5VZR2 741 aa5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 FDX2Q6P4F2 183 aa5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 BEND4Q6ZU67 534 aa5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 TMC7Q7Z402 723 aa5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 ZSCAN29Q8IWY8 852 aaPredicted RBP5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 ASAP3Q8TDY4 903 aa5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 ALKBH8Q96BT7 664 aaKnown RBP5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 DBNDD2Q9BQY9 259 aa5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 TMPRSS13Q9BYE2 586 aa5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 KCNF1Q9H3M0 494 aa5.72□□□□□ -1.49
SHCBP1-202ENST00000563219 PRR19A6NJB7 356 aa5.71□□□□□ -1.5
SHCBP1-202ENST00000563219 KIAA1324LA8MWY0 1029 aaPredicted RBP5.71□□□□□ -1.5
SHCBP1-202ENST00000563219 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.5
SHCBP1-202ENST00000563219 EIF4EBP3O60516 100 aaPredicted RBP5.71□□□□□ -1.5
SHCBP1-202ENST00000563219 ERCC3P19447 782 aa5.71□□□□□ -1.5
SHCBP1-202ENST00000563219 SMG8Q8ND04 991 aaKnown RBP5.71□□□□□ -1.5
SHCBP1-202ENST00000563219 KRTAP9-2Q9BYQ4 174 aa5.71□□□□□ -1.5
SHCBP1-202ENST00000563219 SUGCTQ9HAC7 445 aa5.71□□□□□ -1.5
SHCBP1-202ENST00000563219 CCDC9Q9Y3X0 531 aaKnown RBP5.71□□□□□ -1.5
SHCBP1-202ENST00000563219 LOC100289279A0A1B0GTE1 492 aa5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 GPR182O15218 404 aa5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 TREHO43280 583 aa5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 DLGAP3O95886 979 aa5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 POLR3DP05423 398 aaPredicted RBP5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 DSC3Q14574 896 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms