RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 UTP4Q969X6 686 aaKnown RBP8.33□□□□□ -1.08
SMG1-206ENST00000562668 NXPE3Q969Y0 559 aa8.33□□□□□ -1.08
SMG1-206ENST00000562668 FAM46AQ96IP4 442 aaKnown RBP8.33□□□□□ -1.08
SMG1-206ENST00000562668 NCAPD3P42695 1498 aa8.32□□□□□ -1.08
SMG1-206ENST00000562668 GSC2O15499 205 aa8.32□□□□□ -1.08
SMG1-206ENST00000562668 NLRP12P59046 1061 aa8.32□□□□□ -1.08
SMG1-206ENST00000562668 NBPF11Q86T75 865 aa8.32□□□□□ -1.08
SMG1-206ENST00000562668 BSNDQ8WZ55 320 aa8.32□□□□□ -1.08
SMG1-206ENST00000562668 BHLHE41Q9C0J9 482 aaPredicted RBP8.32□□□□□ -1.08
SMG1-206ENST00000562668 H3BRB1 525 aa8.31□□□□□ -1.08
SMG1-206ENST00000562668 HYAL3O43820 417 aaPredicted RBP8.31□□□□□ -1.08
SMG1-206ENST00000562668 ICMTO60725 284 aa8.31□□□□□ -1.08
SMG1-206ENST00000562668 ARL4DP49703 201 aa8.31□□□□□ -1.08
SMG1-206ENST00000562668 C19orf57Q0VDD7 668 aa8.31□□□□□ -1.08
SMG1-206ENST00000562668 RNF208Q9H0X6 261 aa8.31□□□□□ -1.08
SMG1-206ENST00000562668 TUT1Q9H6E5 874 aaKnown RBP8.31□□□□□ -1.08
SMG1-206ENST00000562668 LATS2Q9NRM7 1088 aa8.31□□□□□ -1.08
SMG1-206ENST00000562668 SMARCA2P51531 1590 aa8.31□□□□□ -1.08
SMG1-206ENST00000562668 SERPINB4P48594 390 aa8.3□□□□□ -1.08
SMG1-206ENST00000562668 IKBKEQ14164 716 aa8.3□□□□□ -1.08
SMG1-206ENST00000562668 PEAR1Q5VY43 1037 aaPredicted RBP8.3□□□□□ -1.08
SMG1-206ENST00000562668 ANKRD34AQ69YU3 496 aa8.3□□□□□ -1.08
SMG1-206ENST00000562668 VN1R5Q7Z5H4 357 aa8.3□□□□□ -1.08
SMG1-206ENST00000562668 MYRFLQ96LU7 910 aa8.3□□□□□ -1.08
SMG1-206ENST00000562668 RUSC1Q9BVN2 902 aa8.3□□□□□ -1.08
SMG1-206ENST00000562668 STOML1Q9UBI4 398 aa8.3□□□□□ -1.08
SMG1-206ENST00000562668 WIZO95785 1651 aa8.3□□□□□ -1.08
SMG1-206ENST00000562668 RSF1Q96T23 1441 aaPredicted RBP8.29□□□□□ -1.08
SMG1-206ENST00000562668 HMGXB3Q12766 1538 aa8.29□□□□□ -1.08
SMG1-206ENST00000562668 IGLV1-40P01703 118 aa8.29□□□□□ -1.08
SMG1-206ENST00000562668 HGSNATQ68CP4 663 aa8.29□□□□□ -1.08
SMG1-206ENST00000562668 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.29□□□□□ -1.08
SMG1-206ENST00000562668 GLYCTKQ8IVS8 523 aa8.29□□□□□ -1.08
SMG1-206ENST00000562668 ASAP3Q8TDY4 903 aa8.29□□□□□ -1.08
SMG1-206ENST00000562668 ZFYVE28Q9HCC9 887 aa8.29□□□□□ -1.08
SMG1-206ENST00000562668 PREPP48147 710 aa8.28□□□□□ -1.08
SMG1-206ENST00000562668 SOX17Q9H6I2 414 aaPredicted RBP8.28□□□□□ -1.08
SMG1-206ENST00000562668 SOX1O00570 391 aaPredicted RBP8.27□□□□□ -1.09
SMG1-206ENST00000562668 SART1O43290 800 aaKnown RBP8.27□□□□□ -1.09
SMG1-206ENST00000562668 FDX2Q6P4F2 183 aa8.27□□□□□ -1.09
SMG1-206ENST00000562668 C7orf69Q9H7B7 122 aa8.27□□□□□ -1.09
SMG1-206ENST00000562668 BRPF3Q9ULD4 1205 aa8.27□□□□□ -1.09
SMG1-206ENST00000562668 POLR3DP05423 398 aaPredicted RBP8.26□□□□□ -1.09
SMG1-206ENST00000562668 FAM20CQ8IXL6 584 aa8.26□□□□□ -1.09
SMG1-206ENST00000562668 USP26Q9BXU7 913 aa8.26□□□□□ -1.09
SMG1-206ENST00000562668 HIF3AQ9Y2N7 669 aa8.26□□□□□ -1.09
SMG1-206ENST00000562668 METTL12A8MUP2 240 aa8.25□□□□□ -1.09
SMG1-206ENST00000562668 NDUFB5O43674 189 aa8.25□□□□□ -1.09
SMG1-206ENST00000562668 ESRRAP11474 423 aaPredicted RBP8.25□□□□□ -1.09
SMG1-206ENST00000562668 ARHGAP4P98171 946 aa8.25□□□□□ -1.09
SMG1-206ENST00000562668 NFIAQ12857 509 aa8.25□□□□□ -1.09
SMG1-206ENST00000562668 ECM1Q16610 540 aa8.25□□□□□ -1.09
SMG1-206ENST00000562668 TRIM42Q8IWZ5 723 aa8.25□□□□□ -1.09
SMG1-206ENST00000562668 GALNT12Q8IXK2 581 aa8.25□□□□□ -1.09
SMG1-206ENST00000562668 ARID3AQ99856 593 aa8.25□□□□□ -1.09
SMG1-206ENST00000562668 PCMTD2Q9NV79 361 aa8.25□□□□□ -1.09
SMG1-206ENST00000562668 LOC100289279A0A1B0GTE1 492 aa8.24□□□□□ -1.09
SMG1-206ENST00000562668 MEGF11A6BM72 1044 aa8.24□□□□□ -1.09
SMG1-206ENST00000562668 GAS2O43903 313 aaKnown RBP8.24□□□□□ -1.09
SMG1-206ENST00000562668 CD97P48960 835 aa8.24□□□□□ -1.09
SMG1-206ENST00000562668 RETREG2Q8NC44 543 aa8.24□□□□□ -1.09
SMG1-206ENST00000562668 DBNDD2Q9BQY9 259 aa8.24□□□□□ -1.09
SMG1-206ENST00000562668 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
SMG1-206ENST00000562668 A0A1W2PP55 124 aa8.23□□□□□ -1.09
SMG1-206ENST00000562668 HMX2A2RU54 273 aa8.23□□□□□ -1.09
SMG1-206ENST00000562668 TGFB1P01137 390 aa8.23□□□□□ -1.09
SMG1-206ENST00000562668 BMP3P12645 472 aa8.23□□□□□ -1.09
SMG1-206ENST00000562668 SSTR4P31391 388 aa8.23□□□□□ -1.09
SMG1-206ENST00000562668 RNF43Q68DV7 783 aa8.23□□□□□ -1.09
SMG1-206ENST00000562668 ZDHHC13Q8IUH4 622 aa8.23□□□□□ -1.09
SMG1-206ENST00000562668 CLEC10AQ8IUN9 316 aa8.23□□□□□ -1.09
SMG1-206ENST00000562668 CCNJLQ8IV13 435 aa8.23□□□□□ -1.09
SMG1-206ENST00000562668 TMPRSS13Q9BYE2 586 aa8.23□□□□□ -1.09
SMG1-206ENST00000562668 LIN7BQ9HAP6 207 aa8.23□□□□□ -1.09
SMG1-206ENST00000562668 BAZ1BQ9UIG0 1483 aaKnown RBP8.23□□□□□ -1.09
SMG1-206ENST00000562668 NEFLP07196 543 aa8.22□□□□□ -1.09
SMG1-206ENST00000562668 PDE3BQ13370 1112 aa8.22□□□□□ -1.09
SMG1-206ENST00000562668 NUTM2GQ5VZR2 741 aa8.22□□□□□ -1.09
SMG1-206ENST00000562668 BEND4Q6ZU67 534 aa8.22□□□□□ -1.09
SMG1-206ENST00000562668 ERICH6Q7L0X2 663 aa8.22□□□□□ -1.09
SMG1-206ENST00000562668 FAM129BQ96TA1 746 aa8.22□□□□□ -1.09
SMG1-206ENST00000562668 TCF12Q99081 682 aa8.22□□□□□ -1.09
SMG1-206ENST00000562668 FAM83CQ9BQN1 747 aa8.22□□□□□ -1.09
SMG1-206ENST00000562668 KCNF1Q9H3M0 494 aa8.22□□□□□ -1.09
SMG1-206ENST00000562668 SUGCTQ9HAC7 445 aa8.22□□□□□ -1.09
SMG1-206ENST00000562668 A0A096LPE4 126 aa8.21□□□□□ -1.1
SMG1-206ENST00000562668 A0A1W2PPZ6 126 aa8.21□□□□□ -1.1
SMG1-206ENST00000562668 EIF4EBP3O60516 100 aaPredicted RBP8.21□□□□□ -1.1
SMG1-206ENST00000562668 TIAF1O95411 115 aa8.21□□□□□ -1.1
SMG1-206ENST00000562668 GSTM4Q03013 218 aa8.21□□□□□ -1.1
SMG1-206ENST00000562668 PCDH1Q08174 1060 aa8.21□□□□□ -1.1
SMG1-206ENST00000562668 USPL1Q5W0Q7 1092 aa8.21□□□□□ -1.1
SMG1-206ENST00000562668 TXNDC2Q86VQ3 553 aa8.21□□□□□ -1.1
SMG1-206ENST00000562668 SMG8Q8ND04 991 aaKnown RBP8.21□□□□□ -1.1
SMG1-206ENST00000562668 PSMG3-AS1Q96PY0 264 aa8.21□□□□□ -1.1
SMG1-206ENST00000562668 NRSN2Q9GZP1 204 aa8.21□□□□□ -1.1
SMG1-206ENST00000562668 CLEC4MQ9H2X3 399 aaPredicted RBP8.21□□□□□ -1.1
SMG1-206ENST00000562668 CYP4F12Q9HCS2 524 aa8.21□□□□□ -1.1
SMG1-206ENST00000562668 KIAA1324LA8MWY0 1029 aaPredicted RBP8.2□□□□□ -1.1
SMG1-206ENST00000562668 COBLO75128 1261 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms