RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-215ENST00000558787 RNF19BQ6ZMZ0 732 aa9.12□□□□□ -0.95
MARK3-215ENST00000558787 PPP1R42Q7Z4L9 355 aa9.12□□□□□ -0.95
MARK3-215ENST00000558787 RBM17Q96I25 401 aaKnown RBP9.12□□□□□ -0.95
MARK3-215ENST00000558787 UTP14AQ9BVJ6 771 aaKnown RBP9.12□□□□□ -0.95
MARK3-215ENST00000558787 PRKRIP1Q9H875 184 aaPredicted RBP9.12□□□□□ -0.95
MARK3-215ENST00000558787 BABAM1Q9NWV8 329 aa9.12□□□□□ -0.95
MARK3-215ENST00000558787 CHPF2Q9P2E5 772 aa9.12□□□□□ -0.95
MARK3-215ENST00000558787 ARFGEF2Q9Y6D5 1785 aa9.12□□□□□ -0.95
MARK3-215ENST00000558787 PCNTO95613 3336 aa9.11□□□□□ -0.95
MARK3-215ENST00000558787 CLCN1P35523 988 aa9.11□□□□□ -0.95
MARK3-215ENST00000558787 PARP10Q53GL7 1025 aa9.11□□□□□ -0.95
MARK3-215ENST00000558787 EAPPQ56P03 285 aaPredicted RBP9.11□□□□□ -0.95
MARK3-215ENST00000558787 SLC10A5Q5PT55 438 aa9.11□□□□□ -0.95
MARK3-215ENST00000558787 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
MARK3-215ENST00000558787 NLRP10Q86W26 655 aa9.11□□□□□ -0.95
MARK3-215ENST00000558787 CCDC102AQ96A19 550 aa9.11□□□□□ -0.95
MARK3-215ENST00000558787 NLRP3Q96P20 1036 aa9.11□□□□□ -0.95
MARK3-215ENST00000558787 CRAMP1Q96RY5 1269 aa9.11□□□□□ -0.95
MARK3-215ENST00000558787 TAF1DQ9H5J8 278 aaPredicted RBP9.11□□□□□ -0.95
MARK3-215ENST00000558787 DDX21Q9NR30 783 aaKnown RBP eCLIP9.11□□□□□ -0.95
MARK3-215ENST00000558787 COL4A5P29400 1685 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 ATP5J2-PTCD1G3V325 749 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 FZD9O00144 591 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 ELL2O00472 640 aaPredicted RBP9.1□□□□□ -0.95
MARK3-215ENST00000558787 APAF1O14727 1248 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 TCIRG1Q13488 830 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 CCDC184Q52MB2 194 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 HDGFL1Q5TGJ6 251 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 JMYQ8N9B5 988 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 PSMD1Q99460 953 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 GPCPD1Q9NPB8 672 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 PRDM9Q9NQV7 894 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 MBIPQ9NS73 344 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 TRMT112Q9UI30 125 aaKnown RBP9.1□□□□□ -0.95
MARK3-215ENST00000558787 GJA3Q9Y6H8 435 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 SNED1Q8TER0 1413 aa9.1□□□□□ -0.95
MARK3-215ENST00000558787 IBTKQ9P2D0 1353 aaPredicted RBP9.1□□□□□ -0.95
MARK3-215ENST00000558787 RNF123Q5XPI4 1314 aa9.09□□□□□ -0.95
MARK3-215ENST00000558787 RTL5Q5HYW3 569 aaPredicted RBP9.09□□□□□ -0.95
MARK3-215ENST00000558787 DUSP27Q5VZP5 1158 aa9.09□□□□□ -0.95
MARK3-215ENST00000558787 LARGE2Q8N3Y3 721 aa9.09□□□□□ -0.95
MARK3-215ENST00000558787 JDP2Q8WYK2 163 aa9.09□□□□□ -0.95
MARK3-215ENST00000558787 PKD2L1Q9P0L9 805 aa9.09□□□□□ -0.95
MARK3-215ENST00000558787 MKRN1Q9UHC7 482 aaKnown RBP9.09□□□□□ -0.95
MARK3-215ENST00000558787 HACL1Q9UJ83 578 aa9.09□□□□□ -0.95
MARK3-215ENST00000558787 ABCC4O15439 1325 aa9.08□□□□□ -0.96
MARK3-215ENST00000558787 IQCA1LA6NCM1 817 aa9.08□□□□□ -0.96
MARK3-215ENST00000558787 EPHX2P34913 555 aa9.08□□□□□ -0.96
MARK3-215ENST00000558787 AOC3Q16853 763 aa9.08□□□□□ -0.96
MARK3-215ENST00000558787 HSP90AB3PQ58FF7 597 aa9.08□□□□□ -0.96
MARK3-215ENST00000558787 CC2D2BQ6DHV5 1058 aa9.08□□□□□ -0.96
MARK3-215ENST00000558787 LDHDQ86WU2 507 aa9.08□□□□□ -0.96
MARK3-215ENST00000558787 FAM89AQ96GI7 184 aa9.08□□□□□ -0.96
MARK3-215ENST00000558787 USB1Q9BQ65 265 aaKnown RBP9.08□□□□□ -0.96
MARK3-215ENST00000558787 ATP6V0A2Q9Y487 856 aa9.08□□□□□ -0.96
MARK3-215ENST00000558787 RIC1Q4ADV7 1423 aa9.07□□□□□ -0.96
MARK3-215ENST00000558787 PPIP5K2O43314 1243 aa9.07□□□□□ -0.96
MARK3-215ENST00000558787 ZNF853P0CG23 659 aa9.07□□□□□ -0.96
MARK3-215ENST00000558787 EPS15P42566 896 aa9.07□□□□□ -0.96
MARK3-215ENST00000558787 EIF6P56537 245 aaKnown RBP9.07□□□□□ -0.96
MARK3-215ENST00000558787 COL13A1Q5TAT6 717 aaPredicted RBP9.07□□□□□ -0.96
MARK3-215ENST00000558787 MAP1SQ66K74 1059 aaPredicted RBP9.07□□□□□ -0.96
MARK3-215ENST00000558787 GPC2Q8N158 579 aa9.07□□□□□ -0.96
MARK3-215ENST00000558787 C8orf58Q8NAV2 365 aa9.07□□□□□ -0.96
MARK3-215ENST00000558787 PLBD2Q8NHP8 589 aa9.07□□□□□ -0.96
MARK3-215ENST00000558787 JARID2Q92833 1246 aaPredicted RBP9.07□□□□□ -0.96
MARK3-215ENST00000558787 PHAXQ9H814 394 aaKnown RBP9.07□□□□□ -0.96
MARK3-215ENST00000558787 DBF4Q9UBU7 674 aaPredicted RBP9.07□□□□□ -0.96
MARK3-215ENST00000558787 SH3TC1Q8TE82 1336 aa9.06□□□□□ -0.96
MARK3-215ENST00000558787 PASKQ96RG2 1323 aa9.06□□□□□ -0.96
MARK3-215ENST00000558787 BBOX1O75936 387 aa9.06□□□□□ -0.96
MARK3-215ENST00000558787 FMR1Q06787 632 aaKnown RBP eCLIP9.06□□□□□ -0.96
MARK3-215ENST00000558787 DDX46Q7L014 1031 aaKnown RBP9.06□□□□□ -0.96
MARK3-215ENST00000558787 SP8Q8IXZ3 490 aa9.06□□□□□ -0.96
MARK3-215ENST00000558787 NIM1KQ8IY84 436 aa9.06□□□□□ -0.96
MARK3-215ENST00000558787 CYP4X1Q8N118 509 aa9.06□□□□□ -0.96
MARK3-215ENST00000558787 ISCA1Q9BUE6 129 aa9.06□□□□□ -0.96
MARK3-215ENST00000558787 FAM217BQ9NTX9 383 aaPredicted RBP9.06□□□□□ -0.96
MARK3-215ENST00000558787 HYPKQ9NX55 129 aa9.06□□□□□ -0.96
MARK3-215ENST00000558787 TAF1P21675 1872 aa9.05□□□□□ -0.96
MARK3-215ENST00000558787 HOXA2O43364 376 aa9.05□□□□□ -0.96
MARK3-215ENST00000558787 HOXB7P09629 217 aa9.05□□□□□ -0.96
MARK3-215ENST00000558787 HSPA1AP0DMV8 641 aaKnown RBP9.05□□□□□ -0.96
MARK3-215ENST00000558787 HSPA1BP0DMV9 641 aaKnown RBP9.05□□□□□ -0.96
MARK3-215ENST00000558787 SCNN1DP51172 638 aa9.05□□□□□ -0.96
MARK3-215ENST00000558787 MMP16P51512 607 aa9.05□□□□□ -0.96
MARK3-215ENST00000558787 GNAI1P63096 354 aa9.05□□□□□ -0.96
MARK3-215ENST00000558787 DPP8Q6V1X1 898 aaPredicted RBP9.05□□□□□ -0.96
MARK3-215ENST00000558787 CNTROBQ8N137 903 aa9.05□□□□□ -0.96
MARK3-215ENST00000558787 MPNDQ8N594 471 aa9.05□□□□□ -0.96
MARK3-215ENST00000558787 TSPYL6Q8N831 410 aa9.05□□□□□ -0.96
MARK3-215ENST00000558787 CELF1Q92879 486 aaKnown RBP9.05□□□□□ -0.96
MARK3-215ENST00000558787 TMX4Q9H1E5 349 aaPredicted RBP9.05□□□□□ -0.96
MARK3-215ENST00000558787 IFT57Q9NWB7 429 aa9.05□□□□□ -0.96
MARK3-215ENST00000558787 SCN4AP35499 1836 aa9.04□□□□□ -0.96
MARK3-215ENST00000558787 RAD17O75943 681 aa9.04□□□□□ -0.96
MARK3-215ENST00000558787 LMOD1P29536 600 aaPredicted RBP9.04□□□□□ -0.96
MARK3-215ENST00000558787 CXCL9Q07325 125 aa9.04□□□□□ -0.96
MARK3-215ENST00000558787 GRAPQ13588 217 aa9.04□□□□□ -0.96
MARK3-215ENST00000558787 RIC3Q7Z5B4 369 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms