RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 MCTP1Q6DN14 999 aa11.85□□□□□ -0.51
RAB5B-206ENST00000549505 IGHMBP2P38935 993 aaKnown RBP11.85□□□□□ -0.51
RAB5B-206ENST00000549505 SPATA5Q8NB90 893 aa11.85□□□□□ -0.51
RAB5B-206ENST00000549505 TRPC5Q9UL62 973 aaPredicted RBP11.85□□□□□ -0.51
RAB5B-206ENST00000549505 PHKA1P46020 1223 aa11.84□□□□□ -0.51
RAB5B-206ENST00000549505 NT5C2P49902 561 aa11.84□□□□□ -0.51
RAB5B-206ENST00000549505 BRWD3Q6RI45 1802 aa11.84□□□□□ -0.51
RAB5B-206ENST00000549505 PUS7LQ9H0K6 701 aaKnown RBP11.84□□□□□ -0.51
RAB5B-206ENST00000549505 GNAT2P19087 354 aa11.84□□□□□ -0.51
RAB5B-206ENST00000549505 TM4SF1P30408 202 aa11.84□□□□□ -0.51
RAB5B-206ENST00000549505 CSPP1Q1MSJ5 1256 aa11.84□□□□□ -0.51
RAB5B-206ENST00000549505 SLC27A3Q5K4L6 730 aa11.84□□□□□ -0.51
RAB5B-206ENST00000549505 GORABQ5T7V8 394 aa11.84□□□□□ -0.51
RAB5B-206ENST00000549505 ATL3Q6DD88 541 aa11.84□□□□□ -0.51
RAB5B-206ENST00000549505 NAA16Q6N069 864 aaPredicted RBP11.84□□□□□ -0.51
RAB5B-206ENST00000549505 CCDC83Q8IWF9 413 aa11.84□□□□□ -0.51
RAB5B-206ENST00000549505 STRBPQ96SI9 672 aaKnown RBP11.84□□□□□ -0.51
RAB5B-206ENST00000549505 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
RAB5B-206ENST00000549505 COL1A1P02452 1464 aaPredicted RBP11.83□□□□□ -0.52
RAB5B-206ENST00000549505 XRCC6P12956 609 aaKnown RBP eCLIP11.83□□□□□ -0.52
RAB5B-206ENST00000549505 HCLS1P14317 486 aaPredicted RBP11.83□□□□□ -0.52
RAB5B-206ENST00000549505 PDE6AP16499 860 aa11.83□□□□□ -0.52
RAB5B-206ENST00000549505 Q6ZUG5 572 aa11.83□□□□□ -0.52
RAB5B-206ENST00000549505 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.52
RAB5B-206ENST00000549505 CHD4Q14839 1912 aa11.83□□□□□ -0.52
RAB5B-206ENST00000549505 GPAA1O43292 621 aa11.83□□□□□ -0.52
RAB5B-206ENST00000549505 FGAP02671 866 aa11.83□□□□□ -0.52
RAB5B-206ENST00000549505 RCAN1P53805 252 aa11.83□□□□□ -0.52
RAB5B-206ENST00000549505 HMGN5P82970 282 aaKnown RBP11.83□□□□□ -0.52
RAB5B-206ENST00000549505 CHRNDQ07001 517 aa11.83□□□□□ -0.52
RAB5B-206ENST00000549505 IMMTQ16891 758 aaKnown RBP11.83□□□□□ -0.52
RAB5B-206ENST00000549505 ERFEQ4G0M1 354 aa11.83□□□□□ -0.52
RAB5B-206ENST00000549505 TBC1D9BQ66K14 1250 aa11.83□□□□□ -0.52
RAB5B-206ENST00000549505 FBXO33Q7Z6M2 555 aa11.83□□□□□ -0.52
RAB5B-206ENST00000549505 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
RAB5B-206ENST00000549505 DDX49Q9Y6V7 483 aaKnown RBP11.83□□□□□ -0.52
RAB5B-206ENST00000549505 QSER1Q2KHR3 1735 aa11.82□□□□□ -0.52
RAB5B-206ENST00000549505 RASGRF1Q13972 1273 aa11.82□□□□□ -0.52
RAB5B-206ENST00000549505 ANAPC4Q9UJX5 808 aa11.82□□□□□ -0.52
RAB5B-206ENST00000549505 LAMB1P07942 1786 aa11.82□□□□□ -0.52
RAB5B-206ENST00000549505 FKBP4Q02790 459 aaKnown RBP eCLIP11.82□□□□□ -0.52
RAB5B-206ENST00000549505 ZSCAN23Q3MJ62 389 aa11.82□□□□□ -0.52
RAB5B-206ENST00000549505 MPHOSPH8Q99549 860 aa11.82□□□□□ -0.52
RAB5B-206ENST00000549505 GRPEL1Q9HAV7 217 aa11.82□□□□□ -0.52
RAB5B-206ENST00000549505 CCDC9Q9Y3X0 531 aaKnown RBP11.82□□□□□ -0.52
RAB5B-206ENST00000549505 AFF2P51816 1311 aa11.82□□□□□ -0.52
RAB5B-206ENST00000549505 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
RAB5B-206ENST00000549505 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
RAB5B-206ENST00000549505 PRPF40AO75400 957 aaKnown RBP11.81□□□□□ -0.52
RAB5B-206ENST00000549505 FGRP09769 529 aa11.81□□□□□ -0.52
RAB5B-206ENST00000549505 UBE2HP62256 183 aa11.81□□□□□ -0.52
RAB5B-206ENST00000549505 GAS2L3Q86XJ1 694 aa11.81□□□□□ -0.52
RAB5B-206ENST00000549505 ANKRD18AQ8IVF6 992 aa11.81□□□□□ -0.52
RAB5B-206ENST00000549505 NSUN7Q8NE18 718 aaKnown RBP11.81□□□□□ -0.52
RAB5B-206ENST00000549505 ANKRD2Q9GZV1 360 aa11.81□□□□□ -0.52
RAB5B-206ENST00000549505 ZSCAN16Q9H4T2 348 aaPredicted RBP11.81□□□□□ -0.52
RAB5B-206ENST00000549505 LETM1O95202 739 aaPredicted RBP11.81□□□□□ -0.52
RAB5B-206ENST00000549505 CTDNEP1O95476 244 aa11.81□□□□□ -0.52
RAB5B-206ENST00000549505 SCRN1Q12765 414 aa11.81□□□□□ -0.52
RAB5B-206ENST00000549505 GIMAP6Q6P9H5 292 aa11.81□□□□□ -0.52
RAB5B-206ENST00000549505 PTF1AQ7RTS3 328 aa11.81□□□□□ -0.52
RAB5B-206ENST00000549505 MINPP1Q9UNW1 487 aa11.81□□□□□ -0.52
RAB5B-206ENST00000549505 ZNF532Q9HCE3 1301 aa11.81□□□□□ -0.52
RAB5B-206ENST00000549505 MYH13Q9UKX3 1938 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 PDIA3P30101 505 aaKnown RBP11.8□□□□□ -0.52
RAB5B-206ENST00000549505 ANTXR2P58335 489 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 MAP3K12Q12852 859 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 C3orf67Q6ZVT6 689 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 CCNL1Q9UK58 526 aaPredicted RBP11.8□□□□□ -0.52
RAB5B-206ENST00000549505 RTCBQ9Y3I0 505 aaKnown RBP11.8□□□□□ -0.52
RAB5B-206ENST00000549505 RESTQ13127 1097 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 SLC9C2Q5TAH2 1124 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 USP48Q86UV5 1035 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 SGMS1Q86VZ5 419 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 PPP1R9BQ96SB3 815 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 PCP11498 1178 aaKnown RBP11.8□□□□□ -0.52
RAB5B-206ENST00000549505 MCM5P33992 734 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 SLFNL1Q499Z3 407 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 CRY2Q49AN0 593 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 LRSAM1Q6UWE0 723 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 PI16Q6UXB8 463 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 NCOA7Q8NI08 942 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
RAB5B-206ENST00000549505 ECM29Q5VYK3 1845 aa11.8□□□□□ -0.52
RAB5B-206ENST00000549505 DDX60LQ5H9U9 1706 aaKnown RBP11.79□□□□□ -0.52
RAB5B-206ENST00000549505 TMEM87BQ96K49 555 aa11.79□□□□□ -0.52
RAB5B-206ENST00000549505 ZMYND15Q9H091 742 aa11.79□□□□□ -0.52
RAB5B-206ENST00000549505 TMEM63CQ9P1W3 806 aa11.79□□□□□ -0.52
RAB5B-206ENST00000549505 TPTE2Q6XPS3 522 aa11.79□□□□□ -0.52
RAB5B-206ENST00000549505 NECAB1Q8N987 351 aa11.79□□□□□ -0.52
RAB5B-206ENST00000549505 STAG1Q8WVM7 1258 aa11.79□□□□□ -0.52
RAB5B-206ENST00000549505 SYAP1Q96A49 352 aaPredicted RBP11.79□□□□□ -0.52
RAB5B-206ENST00000549505 WWC3Q9ULE0 1092 aa11.79□□□□□ -0.52
RAB5B-206ENST00000549505 DENND2AQ9ULE3 1009 aa11.79□□□□□ -0.52
RAB5B-206ENST00000549505 HPS5Q9UPZ3 1129 aa11.79□□□□□ -0.52
RAB5B-206ENST00000549505 HSPA1LP34931 641 aa11.78□□□□□ -0.52
RAB5B-206ENST00000549505 LIFRP42702 1097 aa11.78□□□□□ -0.52
RAB5B-206ENST00000549505 LARP1BQ659C4 914 aaKnown RBP11.78□□□□□ -0.52
RAB5B-206ENST00000549505 CCDC85AQ96PX6 553 aaPredicted RBP11.78□□□□□ -0.52
RAB5B-206ENST00000549505 SETDB2Q96T68 719 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms