RNA–Protein interactions for RNA: ENST00000548209.5

LETMD1-213, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-213ENST00000548209 MYCP01106 439 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-213ENST00000548209 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
LETMD1-213ENST00000548209 SP3Q02447 781 aa13.12□□□□□ -0.31
LETMD1-213ENST00000548209 NECTIN2Q92692 538 aa13.12□□□□□ -0.31
LETMD1-213ENST00000548209 ZC3H12CQ9C0D7 883 aaKnown RBP13.12□□□□□ -0.31
LETMD1-213ENST00000548209 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-213ENST00000548209 OTOFQ9HC10 1997 aa13.12□□□□□ -0.31
LETMD1-213ENST00000548209 SPEF2Q9C093 1822 aa13.11□□□□□ -0.31
LETMD1-213ENST00000548209 ZBTB7BO15156 539 aaPredicted RBP13.11□□□□□ -0.31
LETMD1-213ENST00000548209 CRHR2Q13324 411 aa13.11□□□□□ -0.31
LETMD1-213ENST00000548209 TBC1D16Q8TBP0 767 aa13.11□□□□□ -0.31
LETMD1-213ENST00000548209 TRMT112Q9UI30 125 aaKnown RBP13.11□□□□□ -0.31
LETMD1-213ENST00000548209 PTCH2Q9Y6C5 1203 aa13.11□□□□□ -0.31
LETMD1-213ENST00000548209 SH3TC1Q8TE82 1336 aa13.11□□□□□ -0.31
LETMD1-213ENST00000548209 ALPK3Q96L96 1907 aa13.1□□□□□ -0.31
LETMD1-213ENST00000548209 ELL2O00472 640 aaPredicted RBP13.1□□□□□ -0.31
LETMD1-213ENST00000548209 NBPF9Q3BBW0 867 aa13.1□□□□□ -0.31
LETMD1-213ENST00000548209 OTUD7BQ6GQQ9 843 aa13.1□□□□□ -0.31
LETMD1-213ENST00000548209 CELF1Q92879 486 aaKnown RBP13.1□□□□□ -0.31
LETMD1-213ENST00000548209 PRO3102Q9H379 93 aa13.1□□□□□ -0.31
LETMD1-213ENST00000548209 UPF2Q9HAU5 1272 aaKnown RBP13.1□□□□□ -0.31
LETMD1-213ENST00000548209 ANGEL1Q9UNK9 670 aaKnown RBP13.1□□□□□ -0.31
LETMD1-213ENST00000548209 SOX1O00570 391 aaPredicted RBP13.09□□□□□ -0.31
LETMD1-213ENST00000548209 ZBTB48P10074 688 aaPredicted RBP13.09□□□□□ -0.31
LETMD1-213ENST00000548209 CAP1Q01518 475 aa13.09□□□□□ -0.31
LETMD1-213ENST00000548209 LDLRAD1Q5T700 205 aa13.09□□□□□ -0.31
LETMD1-213ENST00000548209 NLRP10Q86W26 655 aa13.09□□□□□ -0.31
LETMD1-213ENST00000548209 SLC10A4Q96EP9 437 aa13.09□□□□□ -0.31
LETMD1-213ENST00000548209 LRCH3Q96II8 777 aa13.09□□□□□ -0.31
LETMD1-213ENST00000548209 GMLQ99445 158 aa13.09□□□□□ -0.31
LETMD1-213ENST00000548209 COL25A1Q9BXS0 654 aaPredicted RBP13.09□□□□□ -0.31
LETMD1-213ENST00000548209 ERBB4Q15303 1308 aa13.09□□□□□ -0.31
LETMD1-213ENST00000548209 A0A1W2PPC1 479 aa13.08□□□□□ -0.32
LETMD1-213ENST00000548209 WTIPA6NIX2 430 aaPredicted RBP13.08□□□□□ -0.32
LETMD1-213ENST00000548209 UFL1O94874 794 aa13.08□□□□□ -0.32
LETMD1-213ENST00000548209 NUCB1Q02818 461 aa13.08□□□□□ -0.32
LETMD1-213ENST00000548209 ARHGEF6Q15052 776 aa13.08□□□□□ -0.32
LETMD1-213ENST00000548209 HSP90AB3PQ58FF7 597 aa13.08□□□□□ -0.32
LETMD1-213ENST00000548209 RTL5Q5HYW3 569 aaPredicted RBP13.08□□□□□ -0.32
LETMD1-213ENST00000548209 WNK4Q96J92 1243 aa13.08□□□□□ -0.32
LETMD1-213ENST00000548209 PTPRCP08575 1304 aa13.08□□□□□ -0.32
LETMD1-213ENST00000548209 HTATIP2Q9BUP3 242 aa13.07□□□□□ -0.32
LETMD1-213ENST00000548209 FZD1Q9UP38 647 aa13.07□□□□□ -0.32
LETMD1-213ENST00000548209 NR2E3Q9Y5X4 410 aa13.07□□□□□ -0.32
LETMD1-213ENST00000548209 WNT10BO00744 389 aa13.06□□□□□ -0.32
LETMD1-213ENST00000548209 EIF4A1P60842 406 aaKnown RBP13.06□□□□□ -0.32
LETMD1-213ENST00000548209 SH3TC2Q8TF17 1288 aa13.06□□□□□ -0.32
LETMD1-213ENST00000548209 BABAM1Q9NWV8 329 aa13.06□□□□□ -0.32
LETMD1-213ENST00000548209 TSPYL4Q9UJ04 414 aa13.06□□□□□ -0.32
LETMD1-213ENST00000548209 USP17L3A6NCW0 530 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 USP17L4A6NCW7 530 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 BECN1Q14457 450 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 NBR1Q14596 966 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 USP17L1Q7RTZ2 530 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 CHD1LQ86WJ1 897 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 APOBEC3FQ8IUX4 373 aaKnown RBP13.05□□□□□ -0.32
LETMD1-213ENST00000548209 OGFOD1Q8N543 542 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 SHISA4Q96DD7 197 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 CLMNQ96JQ2 1002 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 PODXL2Q9NZ53 605 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 ANKIB1Q9P2G1 1089 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 GGA1Q9UJY5 639 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 MGAMO43451 1857 aa13.05□□□□□ -0.32
LETMD1-213ENST00000548209 COL1A1P02452 1464 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-213ENST00000548209 MYH3P11055 1940 aa13.04□□□□□ -0.32
LETMD1-213ENST00000548209 SEC24BO95487 1268 aa13.04□□□□□ -0.32
LETMD1-213ENST00000548209 SF3B3Q15393 1217 aaKnown RBP13.04□□□□□ -0.32
LETMD1-213ENST00000548209 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
LETMD1-213ENST00000548209 TBC1D32Q96NH3 1257 aa13.04□□□□□ -0.32
LETMD1-213ENST00000548209 SASH1O94885 1247 aa13.03□□□□□ -0.32
LETMD1-213ENST00000548209 ANXA1P04083 346 aa13.03□□□□□ -0.32
LETMD1-213ENST00000548209 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
LETMD1-213ENST00000548209 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
LETMD1-213ENST00000548209 DEFB123Q8N688 67 aa13.03□□□□□ -0.32
LETMD1-213ENST00000548209 STXBP5LQ9Y2K9 1186 aa13.03□□□□□ -0.32
LETMD1-213ENST00000548209 CACNA1FO60840 1977 aa13.03□□□□□ -0.32
LETMD1-213ENST00000548209 EIF2S2P20042 333 aaKnown RBP13.02□□□□□ -0.33
LETMD1-213ENST00000548209 AIMP1Q12904 312 aaKnown RBP13.02□□□□□ -0.33
LETMD1-213ENST00000548209 PDIA6Q15084 440 aa13.02□□□□□ -0.33
LETMD1-213ENST00000548209 MAP3K11Q16584 847 aa13.02□□□□□ -0.33
LETMD1-213ENST00000548209 KRT24Q2M2I5 525 aa13.02□□□□□ -0.33
LETMD1-213ENST00000548209 PTPN18Q99952 460 aa13.02□□□□□ -0.33
LETMD1-213ENST00000548209 C1orf115Q9H7X2 142 aa13.02□□□□□ -0.33
LETMD1-213ENST00000548209 SSC5DA1L4H1 1573 aa13.02□□□□□ -0.33
LETMD1-213ENST00000548209 VCANP13611 3396 aa13.01□□□□□ -0.33
LETMD1-213ENST00000548209 PPP1R12BO60237 982 aaPredicted RBP13.01□□□□□ -0.33
LETMD1-213ENST00000548209 TAF1CQ15572 869 aaPredicted RBP13.01□□□□□ -0.33
LETMD1-213ENST00000548209 PROSER3Q2NL68 480 aa13.01□□□□□ -0.33
LETMD1-213ENST00000548209 ANKRD45Q5TZF3 282 aa13.01□□□□□ -0.33
LETMD1-213ENST00000548209 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
LETMD1-213ENST00000548209 PODNQ7Z5L7 613 aa13.01□□□□□ -0.33
LETMD1-213ENST00000548209 RPAP2Q8IXW5 612 aaPredicted RBP13.01□□□□□ -0.33
LETMD1-213ENST00000548209 NKX2-3Q8TAU0 364 aa13.01□□□□□ -0.33
LETMD1-213ENST00000548209 FBXW7Q969H0 707 aa13.01□□□□□ -0.33
LETMD1-213ENST00000548209 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
LETMD1-213ENST00000548209 MYO3BQ8WXR4 1341 aa13□□□□□ -0.33
LETMD1-213ENST00000548209 GJA5P36382 358 aa13□□□□□ -0.33
LETMD1-213ENST00000548209 CCT4P50991 539 aaKnown RBP13□□□□□ -0.33
LETMD1-213ENST00000548209 MTFR1Q15390 333 aa13□□□□□ -0.33
LETMD1-213ENST00000548209 BMP2KLQ5H9B9 411 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms