RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 SLC51AQ86UW1 340 aa6.55□□□□□ -1.36
RAB3IP-209ENST00000547055 GJD3Q8N144 294 aa6.55□□□□□ -1.36
RAB3IP-209ENST00000547055 ASAP3Q8TDY4 903 aa6.55□□□□□ -1.36
RAB3IP-209ENST00000547055 BSNDQ8WZ55 320 aa6.55□□□□□ -1.36
RAB3IP-209ENST00000547055 UTP4Q969X6 686 aaKnown RBP6.55□□□□□ -1.36
RAB3IP-209ENST00000547055 ARID3AQ99856 593 aa6.55□□□□□ -1.36
RAB3IP-209ENST00000547055 EGFL7Q9UHF1 273 aa6.55□□□□□ -1.36
RAB3IP-209ENST00000547055 HYAL3O43820 417 aaPredicted RBP6.54□□□□□ -1.36
RAB3IP-209ENST00000547055 ICMTO60725 284 aa6.54□□□□□ -1.36
RAB3IP-209ENST00000547055 YBX3P16989 372 aaKnown RBP eCLIP6.54□□□□□ -1.36
RAB3IP-209ENST00000547055 C19orf57Q0VDD7 668 aa6.54□□□□□ -1.36
RAB3IP-209ENST00000547055 IKBKEQ14164 716 aa6.54□□□□□ -1.36
RAB3IP-209ENST00000547055 UVSSAQ2YD98 709 aa6.54□□□□□ -1.36
RAB3IP-209ENST00000547055 ARMC10Q8N2F6 343 aa6.54□□□□□ -1.36
RAB3IP-209ENST00000547055 ZFYVE28Q9HCC9 887 aa6.54□□□□□ -1.36
RAB3IP-209ENST00000547055 H3BRB1 525 aa6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 SART1O43290 800 aaKnown RBP6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 SERPINB4P48594 390 aa6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 PEAR1Q5VY43 1037 aaPredicted RBP6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 HGSNATQ68CP4 663 aa6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 MCTP1Q6DN14 999 aa6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 VN1R5Q7Z5H4 357 aa6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 GLYCTKQ8IVS8 523 aa6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 FAM46AQ96IP4 442 aaKnown RBP6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 RUSC1Q9BVN2 902 aa6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 KRTAP17-1Q9BYP8 105 aa6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 RNF208Q9H0X6 261 aa6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 TUT1Q9H6E5 874 aaKnown RBP6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 LATS2Q9NRM7 1088 aa6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 BRPF3Q9ULD4 1205 aa6.53□□□□□ -1.36
RAB3IP-209ENST00000547055 SOX1O00570 391 aaPredicted RBP6.52□□□□□ -1.37
RAB3IP-209ENST00000547055 GSC2O15499 205 aa6.52□□□□□ -1.37
RAB3IP-209ENST00000547055 IGLV1-40P01703 118 aa6.52□□□□□ -1.37
RAB3IP-209ENST00000547055 POLR3DP05423 398 aaPredicted RBP6.52□□□□□ -1.37
RAB3IP-209ENST00000547055 ANKRD34AQ69YU3 496 aa6.52□□□□□ -1.37
RAB3IP-209ENST00000547055 MYRFLQ96LU7 910 aa6.52□□□□□ -1.37
RAB3IP-209ENST00000547055 BHLHE41Q9C0J9 482 aaPredicted RBP6.52□□□□□ -1.37
RAB3IP-209ENST00000547055 FDX2Q6P4F2 183 aa6.51□□□□□ -1.37
RAB3IP-209ENST00000547055 SUPT5HO00267 1087 aaKnown RBP6.5□□□□□ -1.37
RAB3IP-209ENST00000547055 PREPP48147 710 aa6.5□□□□□ -1.37
RAB3IP-209ENST00000547055 ERICH6Q7L0X2 663 aa6.5□□□□□ -1.37
RAB3IP-209ENST00000547055 TRIM42Q8IWZ5 723 aa6.5□□□□□ -1.37
RAB3IP-209ENST00000547055 USP26Q9BXU7 913 aa6.5□□□□□ -1.37
RAB3IP-209ENST00000547055 KCNF1Q9H3M0 494 aa6.5□□□□□ -1.37
RAB3IP-209ENST00000547055 C7orf69Q9H7B7 122 aa6.5□□□□□ -1.37
RAB3IP-209ENST00000547055 HMX2A2RU54 273 aa6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 METTL12A8MUP2 240 aa6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 NDUFB5O43674 189 aa6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 NEFLP07196 543 aa6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 ESRRAP11474 423 aaPredicted RBP6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 BMP3P12645 472 aa6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 NFIAQ12857 509 aa6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 ECM1Q16610 540 aa6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 FAM20CQ8IXL6 584 aa6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 SOX17Q9H6I2 414 aaPredicted RBP6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 PCMTD2Q9NV79 361 aa6.49□□□□□ -1.37
RAB3IP-209ENST00000547055 MEGF11A6BM72 1044 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 GAS2O43903 313 aaKnown RBP6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 TGFB1P01137 390 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 SSTR4P31391 388 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 ARHGAP4P98171 946 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 GSTM4Q03013 218 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 PDE3BQ13370 1112 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 NUTM2GQ5VZR2 741 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 BEND4Q6ZU67 534 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 CLEC10AQ8IUN9 316 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 GALNT12Q8IXK2 581 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 C12orf50Q8NA57 414 aaPredicted RBP6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 RETREG2Q8NC44 543 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 FAM83CQ9BQN1 747 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 LIN7BQ9HAP6 207 aa6.48□□□□□ -1.37
RAB3IP-209ENST00000547055 A0A096LPE4 126 aa6.47□□□□□ -1.37
RAB3IP-209ENST00000547055 LOC100289279A0A1B0GTE1 492 aa6.47□□□□□ -1.37
RAB3IP-209ENST00000547055 A0A1W2PP55 124 aa6.47□□□□□ -1.37
RAB3IP-209ENST00000547055 A0A1W2PPZ6 126 aa6.47□□□□□ -1.37
RAB3IP-209ENST00000547055 TXKP42681 527 aa6.47□□□□□ -1.37
RAB3IP-209ENST00000547055 PDE4CQ08493 712 aa6.47□□□□□ -1.37
RAB3IP-209ENST00000547055 USPL1Q5W0Q7 1092 aa6.47□□□□□ -1.37
RAB3IP-209ENST00000547055 RNF43Q68DV7 783 aa6.47□□□□□ -1.37
RAB3IP-209ENST00000547055 CYP4F12Q9HCS2 524 aa6.47□□□□□ -1.37
RAB3IP-209ENST00000547055 HIF3AQ9Y2N7 669 aa6.47□□□□□ -1.37
RAB3IP-209ENST00000547055 EIF4EBP3O60516 100 aaPredicted RBP6.46□□□□□ -1.38
RAB3IP-209ENST00000547055 GRIA4P48058 902 aa6.46□□□□□ -1.38
RAB3IP-209ENST00000547055 CD97P48960 835 aa6.46□□□□□ -1.38
RAB3IP-209ENST00000547055 TXNDC2Q86VQ3 553 aa6.46□□□□□ -1.38
RAB3IP-209ENST00000547055 ZDHHC13Q8IUH4 622 aa6.46□□□□□ -1.38
RAB3IP-209ENST00000547055 CCNJLQ8IV13 435 aa6.46□□□□□ -1.38
RAB3IP-209ENST00000547055 TMC1Q8TDI8 760 aa6.46□□□□□ -1.38
RAB3IP-209ENST00000547055 FMNL2Q96PY5 1086 aa6.46□□□□□ -1.38
RAB3IP-209ENST00000547055 TCF12Q99081 682 aa6.46□□□□□ -1.38
RAB3IP-209ENST00000547055 DBNDD2Q9BQY9 259 aa6.46□□□□□ -1.38
RAB3IP-209ENST00000547055 TMPRSS13Q9BYE2 586 aa6.46□□□□□ -1.38
RAB3IP-209ENST00000547055 CPNE3O75131 537 aaKnown RBP6.45□□□□□ -1.38
RAB3IP-209ENST00000547055 DLGAP3O95886 979 aa6.45□□□□□ -1.38
RAB3IP-209ENST00000547055 PCDH1Q08174 1060 aa6.45□□□□□ -1.38
RAB3IP-209ENST00000547055 ORC1Q13415 861 aa6.45□□□□□ -1.38
RAB3IP-209ENST00000547055 FZD5Q13467 585 aa6.45□□□□□ -1.38
RAB3IP-209ENST00000547055 SPRED3Q2MJR0 410 aa6.45□□□□□ -1.38
RAB3IP-209ENST00000547055 EXOSC6Q5RKV6 272 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms