RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
RAB3IP-209ENST00000547055 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
RAB3IP-209ENST00000547055 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
RAB3IP-209ENST00000547055 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
RAB3IP-209ENST00000547055 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
RAB3IP-209ENST00000547055 FOXD1Q16676 465 aa18.58■□□□□ 0.56
RAB3IP-209ENST00000547055 MSH5O43196 834 aa17.68■□□□□ 0.42
RAB3IP-209ENST00000547055 PIAS4Q8N2W9 510 aaPredicted RBP17.12■□□□□ 0.33
RAB3IP-209ENST00000547055 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
RAB3IP-209ENST00000547055 PPP6R1Q9UPN7 881 aa16.73■□□□□ 0.27
RAB3IP-209ENST00000547055 ADRA2BP18089 450 aa16.6■□□□□ 0.25
RAB3IP-209ENST00000547055 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
RAB3IP-209ENST00000547055 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
RAB3IP-209ENST00000547055 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.08
RAB3IP-209ENST00000547055 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
RAB3IP-209ENST00000547055 RNF39Q9H2S5 420 aa15.04■□□□□ -0
RAB3IP-209ENST00000547055 DCAF8L1A6NGE4 600 aa14.93□□□□□ -0.02
RAB3IP-209ENST00000547055 PPP4R3CPQ6ZMV5 832 aa14.92□□□□□ -0.02
RAB3IP-209ENST00000547055 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
RAB3IP-209ENST00000547055 HOXD11P31277 338 aaPredicted RBP14.67□□□□□ -0.06
RAB3IP-209ENST00000547055 CNKSR2Q8WXI2 1034 aa14.57□□□□□ -0.08
RAB3IP-209ENST00000547055 POTEHQ6S545 545 aa14.52□□□□□ -0.09
RAB3IP-209ENST00000547055 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
RAB3IP-209ENST00000547055 RNF216Q9NWF9 866 aaPredicted RBP14.38□□□□□ -0.11
RAB3IP-209ENST00000547055 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
RAB3IP-209ENST00000547055 NPM3O75607 178 aaKnown RBP14.21□□□□□ -0.13
RAB3IP-209ENST00000547055 KCNA4P22459 653 aa14.17□□□□□ -0.14
RAB3IP-209ENST00000547055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.18
RAB3IP-209ENST00000547055 DSG3P32926 999 aa13.79□□□□□ -0.2
RAB3IP-209ENST00000547055 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
RAB3IP-209ENST00000547055 CAPN15O75808 1086 aa13.63□□□□□ -0.23
RAB3IP-209ENST00000547055 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
RAB3IP-209ENST00000547055 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
RAB3IP-209ENST00000547055 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
RAB3IP-209ENST00000547055 ABCB7O75027 752 aa13.27□□□□□ -0.29
RAB3IP-209ENST00000547055 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
RAB3IP-209ENST00000547055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.21□□□□□ -0.29
RAB3IP-209ENST00000547055 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.29
RAB3IP-209ENST00000547055 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
RAB3IP-209ENST00000547055 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
RAB3IP-209ENST00000547055 APLP2Q06481 763 aa13.15□□□□□ -0.3
RAB3IP-209ENST00000547055 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
RAB3IP-209ENST00000547055 ZNF219Q9P2Y4 722 aaPredicted RBP13.15□□□□□ -0.3
RAB3IP-209ENST00000547055 MYCNP04198 464 aaPredicted RBP13.14□□□□□ -0.31
RAB3IP-209ENST00000547055 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
RAB3IP-209ENST00000547055 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
RAB3IP-209ENST00000547055 ZBTB22O15209 634 aa13.02□□□□□ -0.33
RAB3IP-209ENST00000547055 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
RAB3IP-209ENST00000547055 POLA2Q14181 598 aa12.75□□□□□ -0.37
RAB3IP-209ENST00000547055 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
RAB3IP-209ENST00000547055 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.37
RAB3IP-209ENST00000547055 HAX1O00165 279 aa12.69□□□□□ -0.38
RAB3IP-209ENST00000547055 EHMT2Q96KQ7 1210 aa12.68□□□□□ -0.38
RAB3IP-209ENST00000547055 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
RAB3IP-209ENST00000547055 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
RAB3IP-209ENST00000547055 REM2Q8IYK8 340 aaPredicted RBP12.56□□□□□ -0.4
RAB3IP-209ENST00000547055 EVX2Q03828 476 aa12.54□□□□□ -0.4
RAB3IP-209ENST00000547055 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
RAB3IP-209ENST00000547055 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
RAB3IP-209ENST00000547055 PITPNM1O00562 1244 aa12.46□□□□□ -0.41
RAB3IP-209ENST00000547055 LHX8Q68G74 356 aa12.35□□□□□ -0.43
RAB3IP-209ENST00000547055 OSCARQ8IYS5 282 aa12.33□□□□□ -0.44
RAB3IP-209ENST00000547055 FBLN2P98095 1184 aa12.32□□□□□ -0.44
RAB3IP-209ENST00000547055 PLSCR2Q9NRY7 297 aa12.28□□□□□ -0.44
RAB3IP-209ENST00000547055 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-209ENST00000547055 GABBR2O75899 941 aa12.17□□□□□ -0.46
RAB3IP-209ENST00000547055 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
RAB3IP-209ENST00000547055 SPDYE2BA6NHP3 402 aa12.14□□□□□ -0.47
RAB3IP-209ENST00000547055 SPDYE6P0CI01 402 aa12.14□□□□□ -0.47
RAB3IP-209ENST00000547055 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
RAB3IP-209ENST00000547055 PRKAR2AP13861 404 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-209ENST00000547055 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
RAB3IP-209ENST00000547055 SSUH2Q9Y2M2 353 aa11.99□□□□□ -0.49
RAB3IP-209ENST00000547055 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
RAB3IP-209ENST00000547055 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
RAB3IP-209ENST00000547055 PABPN1Q86U42 306 aaKnown RBP eCLIP11.88□□□□□ -0.51
RAB3IP-209ENST00000547055 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
RAB3IP-209ENST00000547055 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
RAB3IP-209ENST00000547055 CHADLQ6NUI6 762 aa11.8□□□□□ -0.52
RAB3IP-209ENST00000547055 PRR29P0C7W0 189 aa11.7□□□□□ -0.54
RAB3IP-209ENST00000547055 POTEMA6NI47 508 aa11.69□□□□□ -0.54
RAB3IP-209ENST00000547055 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
RAB3IP-209ENST00000547055 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
RAB3IP-209ENST00000547055 POTEGQ6S5H5 508 aa11.63□□□□□ -0.55
RAB3IP-209ENST00000547055 CLCN6P51797 869 aa11.62□□□□□ -0.55
RAB3IP-209ENST00000547055 DCBLD2Q96PD2 775 aa11.62□□□□□ -0.55
RAB3IP-209ENST00000547055 STAG3Q9UJ98 1225 aa11.61□□□□□ -0.55
RAB3IP-209ENST00000547055 POTEB2H3BUK9 544 aa11.54□□□□□ -0.56
RAB3IP-209ENST00000547055 PROM2Q8N271 834 aa11.52□□□□□ -0.57
RAB3IP-209ENST00000547055 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
RAB3IP-209ENST00000547055 FKBP8Q14318 412 aa11.5□□□□□ -0.57
RAB3IP-209ENST00000547055 PCDH10Q9P2E7 1040 aa11.5□□□□□ -0.57
RAB3IP-209ENST00000547055 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
RAB3IP-209ENST00000547055 CREBZFQ9NS37 354 aa11.43□□□□□ -0.58
RAB3IP-209ENST00000547055 GALR2O43603 387 aaPredicted RBP11.39□□□□□ -0.59
RAB3IP-209ENST00000547055 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
RAB3IP-209ENST00000547055 LCE2DQ5TA82 110 aaPredicted RBP11.33□□□□□ -0.6
RAB3IP-209ENST00000547055 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
RAB3IP-209ENST00000547055 NPM1P06748 294 aaKnown RBP eCLIP11.26□□□□□ -0.61
RAB3IP-209ENST00000547055 MIER1Q8N108 512 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms