RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	ZCCHC2	Q9C0B9	1178 aa	Known RBP	5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	METTL14	Q9HCE5	456 aa	Known RBP	5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	ENC1	O14682	589 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	U2SURP	O15042	1029 aa	Known RBP	5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	MMP20	O60882	483 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	CDC45	O75419	566 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	MSX1	P28360	303 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	LMNB2	Q03252	620 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	APOBR	Q0VD83	1088 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	SQSTM1	Q13501	440 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	COL13A1	Q5TAT6	717 aa	Predicted RBP	5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	DTHD1	Q6ZMT9	781 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	LYSMD3	Q7Z3D4	306 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	PRICKLE2	Q7Z3G6	844 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	SLITRK4	Q8IW52	837 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	VWA5B2	Q8N398	1253 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	ZKSCAN3	Q9BRR0	538 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	COL25A1	Q9BXS0	654 aa	Predicted RBP	5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	LIN7B	Q9HAP6	207 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	SPC25	Q9HBM1	224 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	SLC52A1	Q9NWF4	448 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	SUGT1	Q9Y2Z0	365 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	PPME1	Q9Y570	386 aa		5.71	□□□□□ -1.5
PICALM-222	ENST00000534375	CDC14C	A4D256	554 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	METTL12	A8MUP2	240 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	PAGE1	O75459	146 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	TRPA1	O75762	1119 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	SASH3	O75995	380 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	EDN3	P14138	238 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	EPB42	P16452	691 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	RHOQ	P17081	205 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	TARS	P26639	723 aa	Known RBP	5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	GRIA4	P48058	902 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	SNAP47	Q5SQN1	464 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	TTC39B	Q5VTQ0	682 aa	Predicted RBP	5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	FAM196A	Q6ZSG2	479 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	LRP10	Q7Z4F1	713 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	CCNJL	Q8IV13	435 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	OR13H1	Q8NG92	308 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	CPLX3	Q8WVH0	158 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	NKD1	Q969G9	470 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	PMEPA1	Q969W9	287 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	IRF2BPL	Q9H1B7	796 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	BRD7	Q9NPI1	651 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	DZANK1	Q9NVP4	752 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	LEMD3	Q9Y2U8	911 aa		5.7	□□□□□ -1.5
PICALM-222	ENST00000534375	SENP3-EIF4A1	A0A087X0R7	540 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	TLR3	O15455	904 aa	Known RBP	5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	F13A1	P00488	732 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	RLBP1	P12271	317 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	CHMP4BP1	P59074	171 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	KRT76	Q01546	638 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	DDR2	Q16832	855 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	SPRED3	Q2MJR0	410 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	TKFC	Q3LXA3	575 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	SEZ6	Q53EL9	994 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	RASIP1	Q5U651	963 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	BNC2	Q6ZN30	1099 aa	Predicted RBP	5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	AGMO	Q6ZNB7	445 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	KRT25	Q7Z3Z0	450 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	CERS3	Q8IU89	383 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	NECAB3	Q96P71	396 aa	Predicted RBP	5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	HHIP	Q96QV1	700 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	CCDC113	Q9H0I3	377 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	ST7	Q9NRC1	585 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	DDX56	Q9NY93	547 aa	Known RBP	5.69	□□□□□ -1.5
PICALM-222	ENST00000534375	ZFAT	Q9P243	1243 aa		5.69	□□□□□ -1.5
PICALM-222	ENST00000534375		A0A1B0GTH6	734 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	GIPR	P48546	466 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	GYS2	P54840	703 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	FAAP100	Q0VG06	881 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	SEPT6	Q14141	434 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	TTBK2	Q6IQ55	1244 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	TRPM4	Q8TD43	1214 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	LRRC3	Q9BY71	257 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	TNKS2	Q9H2K2	1166 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	CRISPLD1	Q9H336	500 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	RUBCNL	Q9H714	662 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	GPAM	Q9HCL2	828 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	TMEM260	Q9NX78	707 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	PPP4R2	Q9NY27	417 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	MAPK8IP1	Q9UQF2	711 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	PRKAB1	Q9Y478	270 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	PCDHB5	Q9Y5E4	795 aa		5.68	□□□□□ -1.5
PICALM-222	ENST00000534375	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	PDPK1	O15530	556 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	KIF4A	O95239	1232 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	ITPKA	P23677	461 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	SFSWAP	Q12872	951 aa	Known RBP	5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	RASGRF1	Q13972	1273 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	WDR44	Q5JSH3	913 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	XP32	Q5T750	250 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	TRIM42	Q8IWZ5	723 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	APPBP2	Q92624	585 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	GMCL1	Q96IK5	515 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	OSMR	Q99650	979 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	TIMMDC1	Q9NPL8	285 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	SEC31B	Q9NQW1	1179 aa		5.67	□□□□□ -1.5
PICALM-222	ENST00000534375	CHPF2	Q9P2E5	772 aa		5.67	□□□□□ -1.5

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