RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 TNS4Q8IZW8 715 aa8.42□□□□□ -1.06
PABPC1-207ENST00000518716 GPKOWQ92917 476 aaPredicted RBP eCLIP8.42□□□□□ -1.06
PABPC1-207ENST00000518716 ZNF831Q5JPB2 1677 aa8.42□□□□□ -1.06
PABPC1-207ENST00000518716 SBF1O95248 1867 aa8.42□□□□□ -1.06
PABPC1-207ENST00000518716 MYH14Q7Z406 1995 aaKnown RBP8.42□□□□□ -1.06
PABPC1-207ENST00000518716 C4AP0C0L4 1744 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 KCPQ6ZWJ8 1503 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 KDM6AO15550 1401 aaPredicted RBP8.41□□□□□ -1.06
PABPC1-207ENST00000518716 WASHC2AQ641Q2 1341 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 CNTNAP4Q9C0A0 1308 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 RPS6KA4O75676 772 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 PHKG2P15735 406 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 DBN1Q16643 649 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 TRIM22Q8IYM9 498 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 SLC10A4Q96EP9 437 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 RRAGCQ9HB90 399 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 CCDC87Q9NVE4 849 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 TMOD3Q9NYL9 352 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 SPG7Q9UQ90 795 aa8.41□□□□□ -1.06
PABPC1-207ENST00000518716 RTCBQ9Y3I0 505 aaKnown RBP8.41□□□□□ -1.06
PABPC1-207ENST00000518716 IFNL2Q8IZJ0 200 aa8.4□□□□□ -1.06
PABPC1-207ENST00000518716 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.06
PABPC1-207ENST00000518716 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
PABPC1-207ENST00000518716 LIMD1Q9UGP4 676 aa8.4□□□□□ -1.06
PABPC1-207ENST00000518716 KDM2BQ8NHM5 1336 aa8.39□□□□□ -1.07
PABPC1-207ENST00000518716 ZC3H4Q9UPT8 1303 aaKnown RBP8.39□□□□□ -1.07
PABPC1-207ENST00000518716 ADH1AP07327 375 aa8.39□□□□□ -1.07
PABPC1-207ENST00000518716 RHOQP17081 205 aa8.39□□□□□ -1.07
PABPC1-207ENST00000518716 COL8A1P27658 744 aa8.39□□□□□ -1.07
PABPC1-207ENST00000518716 TM4SF1P30408 202 aa8.39□□□□□ -1.07
PABPC1-207ENST00000518716 ADD1P35611 737 aaKnown RBP8.39□□□□□ -1.07
PABPC1-207ENST00000518716 DDR1Q08345 913 aa8.39□□□□□ -1.07
PABPC1-207ENST00000518716 DALRD3Q5D0E6 543 aaKnown RBP8.39□□□□□ -1.07
PABPC1-207ENST00000518716 SMC1BQ8NDV3 1235 aa8.39□□□□□ -1.07
PABPC1-207ENST00000518716 ARHGAP9Q9BRR9 750 aa8.39□□□□□ -1.07
PABPC1-207ENST00000518716 COL5A3P25940 1745 aaPredicted RBP8.38□□□□□ -1.07
PABPC1-207ENST00000518716 ANKRD26Q9UPS8 1709 aa8.38□□□□□ -1.07
PABPC1-207ENST00000518716 ERVV-2B6SEH9 535 aa8.38□□□□□ -1.07
PABPC1-207ENST00000518716 LILRB3O75022 631 aa8.38□□□□□ -1.07
PABPC1-207ENST00000518716 HSPA1AP0DMV8 641 aaKnown RBP8.38□□□□□ -1.07
PABPC1-207ENST00000518716 HSPA1BP0DMV9 641 aaKnown RBP8.38□□□□□ -1.07
PABPC1-207ENST00000518716 ITGB7P26010 798 aa8.38□□□□□ -1.07
PABPC1-207ENST00000518716 PRICKLE2Q7Z3G6 844 aa8.38□□□□□ -1.07
PABPC1-207ENST00000518716 C16orf71Q8IYS4 520 aaPredicted RBP8.38□□□□□ -1.07
PABPC1-207ENST00000518716 GMCL1Q96IK5 515 aa8.38□□□□□ -1.07
PABPC1-207ENST00000518716 RNF181Q9P0P0 153 aa8.38□□□□□ -1.07
PABPC1-207ENST00000518716 CDV3Q9UKY7 258 aaKnown RBP8.38□□□□□ -1.07
PABPC1-207ENST00000518716 PARP3Q9Y6F1 533 aa8.38□□□□□ -1.07
PABPC1-207ENST00000518716 OIP5O43482 229 aa8.37□□□□□ -1.07
PABPC1-207ENST00000518716 LILRA1O75019 489 aa8.37□□□□□ -1.07
PABPC1-207ENST00000518716 RFC4P35249 363 aa8.37□□□□□ -1.07
PABPC1-207ENST00000518716 PTGIRP43119 386 aa8.37□□□□□ -1.07
PABPC1-207ENST00000518716 LCE3BQ5TA77 95 aa8.37□□□□□ -1.07
PABPC1-207ENST00000518716 PDXDC2PQ6P474 469 aa8.37□□□□□ -1.07
PABPC1-207ENST00000518716 GTPBP3Q969Y2 492 aaKnown RBP8.37□□□□□ -1.07
PABPC1-207ENST00000518716 TNRC6CQ9HCJ0 1690 aaKnown RBP8.37□□□□□ -1.07
PABPC1-207ENST00000518716 ADAMTS7Q9UKP4 1686 aa8.37□□□□□ -1.07
PABPC1-207ENST00000518716 USP42Q9H9J4 1324 aaKnown RBP8.36□□□□□ -1.07
PABPC1-207ENST00000518716 GLTPD2A6NH11 291 aa8.36□□□□□ -1.07
PABPC1-207ENST00000518716 POLRMTO00411 1230 aaKnown RBP8.36□□□□□ -1.07
PABPC1-207ENST00000518716 CHRNA5P30532 468 aa8.36□□□□□ -1.07
PABPC1-207ENST00000518716 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-207ENST00000518716 FOXR1Q6PIV2 292 aa8.36□□□□□ -1.07
PABPC1-207ENST00000518716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.36□□□□□ -1.07
PABPC1-207ENST00000518716 PARP9Q8IXQ6 854 aa8.36□□□□□ -1.07
PABPC1-207ENST00000518716 KRTAP4-12Q9BQ66 201 aa8.36□□□□□ -1.07
PABPC1-207ENST00000518716 OCSTAMPQ9BR26 566 aa8.36□□□□□ -1.07
PABPC1-207ENST00000518716 POLKQ9UBT6 870 aa8.36□□□□□ -1.07
PABPC1-207ENST00000518716 SRP68Q9UHB9 627 aaKnown RBP8.36□□□□□ -1.07
PABPC1-207ENST00000518716 VEGFAP15692 232 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-207ENST00000518716 INTS5Q6P9B9 1019 aaKnown RBP8.35□□□□□ -1.07
PABPC1-207ENST00000518716 HOMEZQ8IX15 550 aa8.35□□□□□ -1.07
PABPC1-207ENST00000518716 HELBQ8NG08 1087 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-207ENST00000518716 KIF20BQ96Q89 1820 aa8.35□□□□□ -1.07
PABPC1-207ENST00000518716 SHISA8B8ZZ34 492 aa8.34□□□□□ -1.07
PABPC1-207ENST00000518716 LMNB1P20700 586 aa8.34□□□□□ -1.07
PABPC1-207ENST00000518716 CRKLP46109 303 aaKnown RBP8.34□□□□□ -1.07
PABPC1-207ENST00000518716 EIF4A2Q14240 407 aaKnown RBP8.34□□□□□ -1.07
PABPC1-207ENST00000518716 RIPOR1Q6ZS17 1223 aa8.34□□□□□ -1.07
PABPC1-207ENST00000518716 NFKBIEO00221 500 aa8.33□□□□□ -1.08
PABPC1-207ENST00000518716 HSP90AB1P08238 724 aaKnown RBP8.33□□□□□ -1.08
PABPC1-207ENST00000518716 MX2P20592 715 aa8.33□□□□□ -1.08
PABPC1-207ENST00000518716 RNF144AP50876 292 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-207ENST00000518716 TUSC1Q2TAM9 212 aa8.33□□□□□ -1.08
PABPC1-207ENST00000518716 MYSM1Q5VVJ2 828 aa8.33□□□□□ -1.08
PABPC1-207ENST00000518716 ZBTB33Q86T24 672 aa8.33□□□□□ -1.08
PABPC1-207ENST00000518716 NRXN2Q9P2S2 1712 aa8.32□□□□□ -1.08
PABPC1-207ENST00000518716 PPM1GO15355 546 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-207ENST00000518716 C1orf229Q6ZS94 237 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-207ENST00000518716 ALYREFQ86V81 257 aaKnown RBP8.32□□□□□ -1.08
PABPC1-207ENST00000518716 FKBPLQ9UIM3 349 aa8.32□□□□□ -1.08
PABPC1-207ENST00000518716 MKL2Q9ULH7 1088 aa8.32□□□□□ -1.08
PABPC1-207ENST00000518716 SOS1Q07889 1333 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-207ENST00000518716 PTCD1O75127 700 aaKnown RBP8.31□□□□□ -1.08
PABPC1-207ENST00000518716 RAB15P59190 212 aa8.31□□□□□ -1.08
PABPC1-207ENST00000518716 NFIXQ14938 502 aa8.31□□□□□ -1.08
PABPC1-207ENST00000518716 NFATC2IPQ8NCF5 419 aa8.31□□□□□ -1.08
PABPC1-207ENST00000518716 TRERF1Q96PN7 1200 aa8.31□□□□□ -1.08
PABPC1-207ENST00000518716 OXCT2Q9BYC2 517 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-207ENST00000518716 PRDM10Q9NQV6 1147 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 714.4 ms