RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 C1orf115Q9H7X2 142 aa8.46□□□□□ -1.06
SNX25-206ENST00000513433 FKBP4Q02790 459 aaKnown RBP eCLIP8.45□□□□□ -1.06
SNX25-206ENST00000513433 C8orf34Q49A92 452 aa8.45□□□□□ -1.06
SNX25-206ENST00000513433 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.45□□□□□ -1.06
SNX25-206ENST00000513433 VN1R5Q7Z5H4 357 aa8.45□□□□□ -1.06
SNX25-206ENST00000513433 ZDHHC13Q8IUH4 622 aa8.45□□□□□ -1.06
SNX25-206ENST00000513433 GJD3Q8N144 294 aa8.45□□□□□ -1.06
SNX25-206ENST00000513433 SNX29Q8TEQ0 813 aa8.45□□□□□ -1.06
SNX25-206ENST00000513433 BSNDQ8WZ55 320 aa8.45□□□□□ -1.06
SNX25-206ENST00000513433 UTP4Q969X6 686 aaKnown RBP8.45□□□□□ -1.06
SNX25-206ENST00000513433 RNF208Q9H0X6 261 aa8.45□□□□□ -1.06
SNX25-206ENST00000513433 HIF3AQ9Y2N7 669 aa8.45□□□□□ -1.06
SNX25-206ENST00000513433 EREGO14944 169 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 EDN3P14138 238 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 CDC25BP30305 580 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 NFIAQ12857 509 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 RNF43Q68DV7 783 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 CLEC10AQ8IUN9 316 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 FAM20CQ8IXL6 584 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 TTC16Q8NEE8 873 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 OSMRQ99650 979 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 FAM83CQ9BQN1 747 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 ZKSCAN3Q9BRR0 538 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 C7orf69Q9H7B7 122 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 MTMR7Q9Y216 660 aa8.44□□□□□ -1.06
SNX25-206ENST00000513433 C19orf57Q0VDD7 668 aa8.43□□□□□ -1.06
SNX25-206ENST00000513433 MTMR3Q13615 1198 aa8.43□□□□□ -1.06
SNX25-206ENST00000513433 SOX1O00570 391 aaPredicted RBP8.42□□□□□ -1.06
SNX25-206ENST00000513433 COBLO75128 1261 aa8.42□□□□□ -1.06
SNX25-206ENST00000513433 PHACTR2O75167 634 aa8.42□□□□□ -1.06
SNX25-206ENST00000513433 TRPA1O75762 1119 aa8.42□□□□□ -1.06
SNX25-206ENST00000513433 MED26O95402 600 aa8.42□□□□□ -1.06
SNX25-206ENST00000513433 PEAR1Q5VY43 1037 aaPredicted RBP8.42□□□□□ -1.06
SNX25-206ENST00000513433 DBNDD2Q9BQY9 259 aa8.42□□□□□ -1.06
SNX25-206ENST00000513433 SUGCTQ9HAC7 445 aa8.42□□□□□ -1.06
SNX25-206ENST00000513433 PCMTD2Q9NV79 361 aa8.42□□□□□ -1.06
SNX25-206ENST00000513433 PRR19A6NJB7 356 aa8.41□□□□□ -1.06
SNX25-206ENST00000513433 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
SNX25-206ENST00000513433 PREPP48147 710 aa8.41□□□□□ -1.06
SNX25-206ENST00000513433 ARL4DP49703 201 aa8.41□□□□□ -1.06
SNX25-206ENST00000513433 TRIM42Q8IWZ5 723 aa8.41□□□□□ -1.06
SNX25-206ENST00000513433 SMG8Q8ND04 991 aaKnown RBP8.41□□□□□ -1.06
SNX25-206ENST00000513433 KRTAP4-12Q9BQ66 201 aa8.41□□□□□ -1.06
SNX25-206ENST00000513433 TMPRSS13Q9BYE2 586 aa8.41□□□□□ -1.06
SNX25-206ENST00000513433 ZFYVE28Q9HCC9 887 aa8.41□□□□□ -1.06
SNX25-206ENST00000513433 EGFL7Q9UHF1 273 aa8.41□□□□□ -1.06
SNX25-206ENST00000513433 HMX2A2RU54 273 aa8.4□□□□□ -1.06
SNX25-206ENST00000513433 SPINK2P20155 84 aa8.4□□□□□ -1.06
SNX25-206ENST00000513433 HGSNATQ68CP4 663 aa8.4□□□□□ -1.06
SNX25-206ENST00000513433 INTS5Q6P9B9 1019 aaKnown RBP8.4□□□□□ -1.06
SNX25-206ENST00000513433 RUSC1Q9BVN2 902 aa8.4□□□□□ -1.06
SNX25-206ENST00000513433 FOXD3Q9UJU5 478 aaPredicted RBP8.4□□□□□ -1.06
SNX25-206ENST00000513433 AMOTL2Q9Y2J4 779 aa8.4□□□□□ -1.06
SNX25-206ENST00000513433 TIAF1O95411 115 aa8.39□□□□□ -1.07
SNX25-206ENST00000513433 TGFB1P01137 390 aa8.39□□□□□ -1.07
SNX25-206ENST00000513433 SSTR4P31391 388 aa8.39□□□□□ -1.07
SNX25-206ENST00000513433 NLRP12P59046 1061 aa8.39□□□□□ -1.07
SNX25-206ENST00000513433 IKBKEQ14164 716 aa8.39□□□□□ -1.07
SNX25-206ENST00000513433 ECM1Q16610 540 aa8.39□□□□□ -1.07
SNX25-206ENST00000513433 USTQ9Y2C2 406 aa8.39□□□□□ -1.07
SNX25-206ENST00000513433 ESRRAP11474 423 aaPredicted RBP8.38□□□□□ -1.07
SNX25-206ENST00000513433 NRSN2Q9GZP1 204 aa8.38□□□□□ -1.07
SNX25-206ENST00000513433 CCDC87Q9NVE4 849 aa8.38□□□□□ -1.07
SNX25-206ENST00000513433 COL17A1Q9UMD9 1497 aaPredicted RBP8.38□□□□□ -1.07
SNX25-206ENST00000513433 LOC100289279A0A1B0GTE1 492 aa8.37□□□□□ -1.07
SNX25-206ENST00000513433 BMP3P12645 472 aa8.37□□□□□ -1.07
SNX25-206ENST00000513433 DTX1Q86Y01 620 aa8.37□□□□□ -1.07
SNX25-206ENST00000513433 SLC7A3Q8WY07 619 aa8.37□□□□□ -1.07
SNX25-206ENST00000513433 LAMC3Q9Y6N6 1575 aa8.36□□□□□ -1.07
SNX25-206ENST00000513433 SART1O43290 800 aaKnown RBP8.36□□□□□ -1.07
SNX25-206ENST00000513433 ICMTO60725 284 aa8.36□□□□□ -1.07
SNX25-206ENST00000513433 MCTP1Q6DN14 999 aa8.36□□□□□ -1.07
SNX25-206ENST00000513433 BEND4Q6ZU67 534 aa8.36□□□□□ -1.07
SNX25-206ENST00000513433 GALNT12Q8IXK2 581 aa8.36□□□□□ -1.07
SNX25-206ENST00000513433 PRDM2Q13029 1718 aa8.36□□□□□ -1.07
SNX25-206ENST00000513433 DLGAP3O95886 979 aa8.35□□□□□ -1.07
SNX25-206ENST00000513433 FDX2Q6P4F2 183 aa8.35□□□□□ -1.07
SNX25-206ENST00000513433 CCNJLQ8IV13 435 aa8.35□□□□□ -1.07
SNX25-206ENST00000513433 LATS2Q9NRM7 1088 aa8.35□□□□□ -1.07
SNX25-206ENST00000513433 GRIK1P39086 918 aa8.34□□□□□ -1.07
SNX25-206ENST00000513433 AAMPQ13685 434 aa8.34□□□□□ -1.07
SNX25-206ENST00000513433 EXOSC6Q5RKV6 272 aaKnown RBP8.34□□□□□ -1.07
SNX25-206ENST00000513433 CCDC88BA6NC98 1476 aa8.33□□□□□ -1.08
SNX25-206ENST00000513433 CARNS1A5YM72 827 aa8.33□□□□□ -1.08
SNX25-206ENST00000513433 MAP4P27816 1152 aaKnown RBP8.33□□□□□ -1.08
SNX25-206ENST00000513433 CPSF6Q16630 551 aaKnown RBP eCLIP8.33□□□□□ -1.08
SNX25-206ENST00000513433 NUTM2GQ5VZR2 741 aa8.33□□□□□ -1.08
SNX25-206ENST00000513433 B4GALNT3Q6L9W6 998 aa8.33□□□□□ -1.08
SNX25-206ENST00000513433 SHKBP1Q8TBC3 707 aa8.33□□□□□ -1.08
SNX25-206ENST00000513433 TCF12Q99081 682 aa8.33□□□□□ -1.08
SNX25-206ENST00000513433 CYP4F12Q9HCS2 524 aa8.33□□□□□ -1.08
SNX25-206ENST00000513433 A0A1W2PP55 124 aa8.32□□□□□ -1.08
SNX25-206ENST00000513433 ADAMTS4O75173 837 aa8.32□□□□□ -1.08
SNX25-206ENST00000513433 ZNF211Q13398 564 aaPredicted RBP8.32□□□□□ -1.08
SNX25-206ENST00000513433 KIAA0319Q5VV43 1072 aa8.32□□□□□ -1.08
SNX25-206ENST00000513433 A0A096LPE4 126 aa8.31□□□□□ -1.08
SNX25-206ENST00000513433 A0A1W2PPZ6 126 aa8.31□□□□□ -1.08
SNX25-206ENST00000513433 SUPT5HO00267 1087 aaKnown RBP8.31□□□□□ -1.08
SNX25-206ENST00000513433 SGO2Q562F6 1265 aa8.31□□□□□ -1.08
SNX25-206ENST00000513433 ASAP3Q8TDY4 903 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms