RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 AEBP2Q6ZN18 517 aaPredicted RBP29.33■■■□□ 2.29
SNX25-206ENST00000513433 CHIC1Q5VXU3 224 aa28.11■■■□□ 2.09
SNX25-206ENST00000513433 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
SNX25-206ENST00000513433 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
SNX25-206ENST00000513433 FOXD1Q16676 465 aa23.26■■□□□ 1.31
SNX25-206ENST00000513433 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
SNX25-206ENST00000513433 PPP6R1Q9UPN7 881 aa21.91■■□□□ 1.1
SNX25-206ENST00000513433 ADRA2BP18089 450 aa21.8■■□□□ 1.08
SNX25-206ENST00000513433 PIAS4Q8N2W9 510 aaPredicted RBP21.71■■□□□ 1.07
SNX25-206ENST00000513433 MSH5O43196 834 aa21.7■■□□□ 1.06
SNX25-206ENST00000513433 POTEDQ86YR6 584 aa20.76■□□□□ 0.91
SNX25-206ENST00000513433 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
SNX25-206ENST00000513433 MAPK8IP2Q13387 824 aaPredicted RBP19.95■□□□□ 0.78
SNX25-206ENST00000513433 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.77
SNX25-206ENST00000513433 PPP4R3CPQ6ZMV5 832 aa19.75■□□□□ 0.75
SNX25-206ENST00000513433 CNKSR2Q8WXI2 1034 aa19.37■□□□□ 0.69
SNX25-206ENST00000513433 HOXD11P31277 338 aaPredicted RBP19.28■□□□□ 0.68
SNX25-206ENST00000513433 RNF216Q9NWF9 866 aaPredicted RBP19.16■□□□□ 0.66
SNX25-206ENST00000513433 NCBP3Q53F19 620 aaKnown RBP19.06■□□□□ 0.64
SNX25-206ENST00000513433 DCAF8L1A6NGE4 600 aa18.81■□□□□ 0.6
SNX25-206ENST00000513433 NPM3O75607 178 aaKnown RBP18.8■□□□□ 0.6
SNX25-206ENST00000513433 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
SNX25-206ENST00000513433 KCNA4P22459 653 aa18.6■□□□□ 0.57
SNX25-206ENST00000513433 RNF39Q9H2S5 420 aa18.55■□□□□ 0.56
SNX25-206ENST00000513433 CACNB1Q02641 598 aaPredicted RBP18.37■□□□□ 0.53
SNX25-206ENST00000513433 C1QBPQ07021 282 aaKnown RBP18.31■□□□□ 0.52
SNX25-206ENST00000513433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.51
SNX25-206ENST00000513433 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
SNX25-206ENST00000513433 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
SNX25-206ENST00000513433 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.4
SNX25-206ENST00000513433 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
SNX25-206ENST00000513433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
SNX25-206ENST00000513433 HNRNPUL2Q1KMD3 747 aaKnown RBP17.51■□□□□ 0.39
SNX25-206ENST00000513433 APLP2Q06481 763 aa17.46■□□□□ 0.39
SNX25-206ENST00000513433 CAPN15O75808 1086 aa17.45■□□□□ 0.38
SNX25-206ENST00000513433 DSG3P32926 999 aa17.42■□□□□ 0.38
SNX25-206ENST00000513433 SAMD1Q6SPF0 538 aaPredicted RBP17.42■□□□□ 0.38
SNX25-206ENST00000513433 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
SNX25-206ENST00000513433 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
SNX25-206ENST00000513433 ZNF219Q9P2Y4 722 aaPredicted RBP17.3■□□□□ 0.36
SNX25-206ENST00000513433 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
SNX25-206ENST00000513433 ZBTB22O15209 634 aa17.13■□□□□ 0.33
SNX25-206ENST00000513433 ABCB7O75027 752 aa17.05■□□□□ 0.32
SNX25-206ENST00000513433 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
SNX25-206ENST00000513433 POLA2Q14181 598 aa16.87■□□□□ 0.29
SNX25-206ENST00000513433 ATXN8OSP0DMR3 200 aa16.86■□□□□ 0.29
SNX25-206ENST00000513433 ZBTB12Q9Y330 459 aaPredicted RBP16.62■□□□□ 0.25
SNX25-206ENST00000513433 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
SNX25-206ENST00000513433 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
SNX25-206ENST00000513433 POTEHQ6S545 545 aa16.3■□□□□ 0.2
SNX25-206ENST00000513433 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
SNX25-206ENST00000513433 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
SNX25-206ENST00000513433 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
SNX25-206ENST00000513433 FBLN2P98095 1184 aa16.24■□□□□ 0.19
SNX25-206ENST00000513433 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
SNX25-206ENST00000513433 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
SNX25-206ENST00000513433 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
SNX25-206ENST00000513433 SPDYE2Q495Y8 402 aa16.13■□□□□ 0.17
SNX25-206ENST00000513433 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
SNX25-206ENST00000513433 REM2Q8IYK8 340 aaPredicted RBP16.11■□□□□ 0.17
SNX25-206ENST00000513433 SSUH2Q9Y2M2 353 aa15.97■□□□□ 0.15
SNX25-206ENST00000513433 PITPNM1O00562 1244 aa15.92■□□□□ 0.14
SNX25-206ENST00000513433 ZNF692Q9BU19 519 aaPredicted RBP15.89■□□□□ 0.13
SNX25-206ENST00000513433 FXR2P51116 673 aaKnown RBP eCLIP15.81■□□□□ 0.12
SNX25-206ENST00000513433 PIP4P2Q8N4L2 257 aa15.8■□□□□ 0.12
SNX25-206ENST00000513433 SPDYE1Q8NFV5 336 aaPredicted RBP15.75■□□□□ 0.11
SNX25-206ENST00000513433 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
SNX25-206ENST00000513433 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
SNX25-206ENST00000513433 SPDYE4A6NLX3 237 aa15.5■□□□□ 0.07
SNX25-206ENST00000513433 PRKAR2AP13861 404 aaKnown RBP15.47■□□□□ 0.07
SNX25-206ENST00000513433 PRR29P0C7W0 189 aa15.44■□□□□ 0.06
SNX25-206ENST00000513433 SP7Q8TDD2 431 aaPredicted RBP15.4■□□□□ 0.06
SNX25-206ENST00000513433 HAX1O00165 279 aa15.37■□□□□ 0.05
SNX25-206ENST00000513433 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
SNX25-206ENST00000513433 PROM2Q8N271 834 aa15.34■□□□□ 0.05
SNX25-206ENST00000513433 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
SNX25-206ENST00000513433 C19orf67A6NJJ6 358 aa15.29■□□□□ 0.04
SNX25-206ENST00000513433 EVX2Q03828 476 aa15.27■□□□□ 0.04
SNX25-206ENST00000513433 FARP1Q9Y4F1 1045 aaPredicted RBP15.19■□□□□ 0.02
SNX25-206ENST00000513433 CREBZFQ9NS37 354 aa15.17■□□□□ 0.02
SNX25-206ENST00000513433 CD44P16070 742 aaKnown RBP15□□□□□ -0.01
SNX25-206ENST00000513433 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
SNX25-206ENST00000513433 GABBR2O75899 941 aa14.95□□□□□ -0.02
SNX25-206ENST00000513433 CLCN6P51797 869 aa14.92□□□□□ -0.02
SNX25-206ENST00000513433 FKBP8Q14318 412 aa14.9□□□□□ -0.02
SNX25-206ENST00000513433 NPM1P06748 294 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNX25-206ENST00000513433 ZNF579Q8NAF0 562 aaKnown RBP14.87□□□□□ -0.03
SNX25-206ENST00000513433 ZRANB1Q9UGI0 708 aa14.8□□□□□ -0.04
SNX25-206ENST00000513433 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
SNX25-206ENST00000513433 MIER1Q8N108 512 aa14.71□□□□□ -0.05
SNX25-206ENST00000513433 PLEKHG5O94827 1062 aa14.68□□□□□ -0.06
SNX25-206ENST00000513433 POTEIP0CG38 1075 aa14.66□□□□□ -0.06
SNX25-206ENST00000513433 FBXO3Q9UK99 471 aa14.62□□□□□ -0.07
SNX25-206ENST00000513433 PHF12Q96QT6 1004 aa14.61□□□□□ -0.07
SNX25-206ENST00000513433 PLCD3Q8N3E9 789 aa14.6□□□□□ -0.07
SNX25-206ENST00000513433 GALR2O43603 387 aaPredicted RBP14.58□□□□□ -0.08
SNX25-206ENST00000513433 ZBTB47Q9UFB7 747 aaPredicted RBP14.58□□□□□ -0.08
SNX25-206ENST00000513433 CCDC61Q9Y6R9 512 aa14.58□□□□□ -0.08
SNX25-206ENST00000513433 RASEFQ8IZ41 740 aa14.53□□□□□ -0.08
SNX25-206ENST00000513433 DCBLD2Q96PD2 775 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms