RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 GNAT2P19087 354 aa20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 ZSCAN23Q3MJ62 389 aa20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 NCOA7Q8NI08 942 aa20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 PIH1D3Q9NQM4 214 aaKnown RBP20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 LAMA4Q16363 1823 aa20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 IGSF3O75054 1194 aa20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 IDH1O75874 414 aaKnown RBP20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 FGAP02671 866 aa20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 ADRA2BP18089 450 aa20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 GTF2E1P29083 439 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 ERFEQ4G0M1 354 aa20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 RGS22Q8NE09 1264 aa20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 BRF1Q92994 677 aa20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 MCM5P33992 734 aa20.4■□□□□ 0.86
TRAPPC11-204ENST00000505676 UBE2HP62256 183 aa20.4■□□□□ 0.86
TRAPPC11-204ENST00000505676 SMARCC2Q8TAQ2 1214 aa20.4■□□□□ 0.86
TRAPPC11-204ENST00000505676 TCEANC2Q96MN5 208 aa20.4■□□□□ 0.86
TRAPPC11-204ENST00000505676 CARMIL3Q8ND23 1372 aa20.4■□□□□ 0.86
TRAPPC11-204ENST00000505676 ZNF804BA4D1E1 1349 aa20.4■□□□□ 0.86
TRAPPC11-204ENST00000505676 TCRBV5S4A2TA0A5A2 114 aa20.39■□□□□ 0.86
TRAPPC11-204ENST00000505676 PI16Q6UXB8 463 aa20.39■□□□□ 0.86
TRAPPC11-204ENST00000505676 TPTE2Q6XPS3 522 aa20.39■□□□□ 0.86
TRAPPC11-204ENST00000505676 RALYLQ86SE5 291 aaKnown RBP20.39■□□□□ 0.86
TRAPPC11-204ENST00000505676 ZNF532Q9HCE3 1301 aa20.39■□□□□ 0.85
TRAPPC11-204ENST00000505676 SEMA3EO15041 775 aa20.39■□□□□ 0.85
TRAPPC11-204ENST00000505676 GNPATO15228 680 aa20.39■□□□□ 0.85
TRAPPC11-204ENST00000505676 FOXP2O15409 715 aa20.39■□□□□ 0.85
TRAPPC11-204ENST00000505676 LETM1O95202 739 aaPredicted RBP20.39■□□□□ 0.85
TRAPPC11-204ENST00000505676 TRDNQ13061 729 aa20.39■□□□□ 0.85
TRAPPC11-204ENST00000505676 RASGRF1Q13972 1273 aa20.39■□□□□ 0.85
TRAPPC11-204ENST00000505676 NLRP3Q96P20 1036 aa20.39■□□□□ 0.85
TRAPPC11-204ENST00000505676 BCL2L12Q9HB09 334 aa20.39■□□□□ 0.85
TRAPPC11-204ENST00000505676 AFF2P51816 1311 aa20.39■□□□□ 0.85
TRAPPC11-204ENST00000505676 DHX16O60231 1041 aaKnown RBP20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 SLFNL1Q499Z3 407 aa20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 TBC1D9BQ66K14 1250 aa20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 USP48Q86UV5 1035 aa20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 HELBQ8NG08 1087 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 AIDAQ96BJ3 306 aa20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 TAF1LQ8IZX4 1826 aa20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 PDS5AQ29RF7 1337 aaKnown RBP20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 VPS37CA5D8V6 355 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 KRT85P78386 507 aa20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 BCL11BQ9C0K0 894 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 ANKRD2Q9GZV1 360 aa20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 ZSCAN16Q9H4T2 348 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC11-204ENST00000505676 ELP1O95163 1332 aa20.37■□□□□ 0.85
TRAPPC11-204ENST00000505676 PNPLA7Q6ZV29 1317 aa20.37■□□□□ 0.85
TRAPPC11-204ENST00000505676 SBF2Q86WG5 1849 aa20.37■□□□□ 0.85
TRAPPC11-204ENST00000505676 CAVIN4Q5BKX8 364 aa20.37■□□□□ 0.85
TRAPPC11-204ENST00000505676 NBPF5PQ86XG9 351 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC11-204ENST00000505676 MB21D2Q8IYB1 491 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC11-204ENST00000505676 FAM184AQ8NB25 1140 aa20.37■□□□□ 0.85
TRAPPC11-204ENST00000505676 C4BP0C0L5 1744 aa20.36■□□□□ 0.85
TRAPPC11-204ENST00000505676 NAA16Q6N069 864 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC11-204ENST00000505676 ANP32BQ92688 251 aaKnown RBP20.36■□□□□ 0.85
TRAPPC11-204ENST00000505676 STRBPQ96SI9 672 aaKnown RBP20.36■□□□□ 0.85
TRAPPC11-204ENST00000505676 A0A1B0GUL6 1792 aa20.36■□□□□ 0.85
TRAPPC11-204ENST00000505676 PATL2C9JE40 543 aaKnown RBP20.35■□□□□ 0.85
TRAPPC11-204ENST00000505676 SCRN1Q12765 414 aa20.35■□□□□ 0.85
TRAPPC11-204ENST00000505676 COL9A3Q14050 684 aaPredicted RBP20.35■□□□□ 0.85
TRAPPC11-204ENST00000505676 SCAND2PQ9GZW5 306 aaPredicted RBP20.35■□□□□ 0.85
TRAPPC11-204ENST00000505676 STK3Q13188 491 aa20.35■□□□□ 0.85
TRAPPC11-204ENST00000505676 LRSAM1Q6UWE0 723 aa20.35■□□□□ 0.85
TRAPPC11-204ENST00000505676 NACAP1Q9BZK3 213 aa20.35■□□□□ 0.85
TRAPPC11-204ENST00000505676 ATL3Q6DD88 541 aa20.34■□□□□ 0.85
TRAPPC11-204ENST00000505676 TTLL5Q6EMB2 1281 aa20.34■□□□□ 0.85
TRAPPC11-204ENST00000505676 WWC3Q9ULE0 1092 aa20.34■□□□□ 0.85
TRAPPC11-204ENST00000505676 DENND2AQ9ULE3 1009 aa20.34■□□□□ 0.85
TRAPPC11-204ENST00000505676 CNPY2Q9Y2B0 182 aa20.34■□□□□ 0.85
TRAPPC11-204ENST00000505676 TRAPPC3LQ5T215 181 aa20.34■□□□□ 0.85
TRAPPC11-204ENST00000505676 GAS2L3Q86XJ1 694 aa20.34■□□□□ 0.85
TRAPPC11-204ENST00000505676 MTA3Q9BTC8 594 aa20.34■□□□□ 0.85
TRAPPC11-204ENST00000505676 TMEM63CQ9P1W3 806 aa20.34■□□□□ 0.85
TRAPPC11-204ENST00000505676 MINPP1Q9UNW1 487 aa20.34■□□□□ 0.85
TRAPPC11-204ENST00000505676 PRC1O43663 620 aa20.33■□□□□ 0.85
TRAPPC11-204ENST00000505676 PDIA3P30101 505 aaKnown RBP20.33■□□□□ 0.85
TRAPPC11-204ENST00000505676 RPS8P62241 208 aaKnown RBP20.33■□□□□ 0.85
TRAPPC11-204ENST00000505676 SLC27A3Q5K4L6 730 aa20.33■□□□□ 0.85
TRAPPC11-204ENST00000505676 SEPT12Q8IYM1 358 aa20.33■□□□□ 0.85
TRAPPC11-204ENST00000505676 MAGEB6Q8N7X4 407 aa20.33■□□□□ 0.85
TRAPPC11-204ENST00000505676 NSUN7Q8NE18 718 aaKnown RBP20.33■□□□□ 0.85
TRAPPC11-204ENST00000505676 TMEM87BQ96K49 555 aa20.33■□□□□ 0.85
TRAPPC11-204ENST00000505676 CNNM2Q9H8M5 875 aa20.33■□□□□ 0.85
TRAPPC11-204ENST00000505676 H3BQV1 296 aa20.33■□□□□ 0.84
TRAPPC11-204ENST00000505676 RFC4P35249 363 aa20.33■□□□□ 0.84
TRAPPC11-204ENST00000505676 BCAMP50895 628 aa20.33■□□□□ 0.84
TRAPPC11-204ENST00000505676 APOBRQ0VD83 1088 aa20.33■□□□□ 0.84
TRAPPC11-204ENST00000505676 IFFO2Q5TF58 517 aa20.33■□□□□ 0.84
TRAPPC11-204ENST00000505676 ARHGEF1Q92888 912 aaKnown RBP20.33■□□□□ 0.84
TRAPPC11-204ENST00000505676 CASZ1Q86V15 1759 aa20.32■□□□□ 0.84
TRAPPC11-204ENST00000505676 CCDC183Q5T5S1 534 aa20.32■□□□□ 0.84
TRAPPC11-204ENST00000505676 CDC37L1Q7L3B6 337 aa20.32■□□□□ 0.84
TRAPPC11-204ENST00000505676 SALL1Q9NSC2 1324 aa20.32■□□□□ 0.84
TRAPPC11-204ENST00000505676 TIAM2Q8IVF5 1701 aa20.32■□□□□ 0.84
TRAPPC11-204ENST00000505676 APPP05067 770 aa20.31■□□□□ 0.84
TRAPPC11-204ENST00000505676 BRPF3Q9ULD4 1205 aa20.31■□□□□ 0.84
TRAPPC11-204ENST00000505676 HSPA1LP34931 641 aa20.31■□□□□ 0.84
TRAPPC11-204ENST00000505676 DNM1Q05193 864 aaKnown RBP20.31■□□□□ 0.84
TRAPPC11-204ENST00000505676 BICDL1Q6ZP65 573 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms