RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 RNF208Q9H0X6 261 aa7.14□□□□□ -1.27
CBX3-208ENST00000497498 ZFYVE28Q9HCC9 887 aa7.14□□□□□ -1.27
CBX3-208ENST00000497498 AMOTL2Q9Y2J4 779 aa7.14□□□□□ -1.27
CBX3-208ENST00000497498 ICMTO60725 284 aa7.13□□□□□ -1.27
CBX3-208ENST00000497498 IKBKEQ14164 716 aa7.13□□□□□ -1.27
CBX3-208ENST00000497498 ECM1Q16610 540 aa7.13□□□□□ -1.27
CBX3-208ENST00000497498 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.13□□□□□ -1.27
CBX3-208ENST00000497498 FAM20CQ8IXL6 584 aa7.13□□□□□ -1.27
CBX3-208ENST00000497498 SOX17Q9H6I2 414 aaPredicted RBP7.13□□□□□ -1.27
CBX3-208ENST00000497498 C7orf69Q9H7B7 122 aa7.13□□□□□ -1.27
CBX3-208ENST00000497498 LATS2Q9NRM7 1088 aa7.13□□□□□ -1.27
CBX3-208ENST00000497498 PREPP48147 710 aa7.12□□□□□ -1.27
CBX3-208ENST00000497498 CD97P48960 835 aa7.12□□□□□ -1.27
CBX3-208ENST00000497498 NFIAQ12857 509 aa7.12□□□□□ -1.27
CBX3-208ENST00000497498 B4GALNT3Q6L9W6 998 aa7.12□□□□□ -1.27
CBX3-208ENST00000497498 CLEC10AQ8IUN9 316 aa7.12□□□□□ -1.27
CBX3-208ENST00000497498 TRIM42Q8IWZ5 723 aa7.12□□□□□ -1.27
CBX3-208ENST00000497498 RUSC1Q9BVN2 902 aa7.12□□□□□ -1.27
CBX3-208ENST00000497498 HMX2A2RU54 273 aa7.11□□□□□ -1.27
CBX3-208ENST00000497498 RNF43Q68DV7 783 aa7.11□□□□□ -1.27
CBX3-208ENST00000497498 ZDHHC13Q8IUH4 622 aa7.11□□□□□ -1.27
CBX3-208ENST00000497498 FAM83CQ9BQN1 747 aa7.11□□□□□ -1.27
CBX3-208ENST00000497498 HIF3AQ9Y2N7 669 aa7.11□□□□□ -1.27
CBX3-208ENST00000497498 SART1O43290 800 aaKnown RBP7.1□□□□□ -1.27
CBX3-208ENST00000497498 ESRRAP11474 423 aaPredicted RBP7.1□□□□□ -1.27
CBX3-208ENST00000497498 BMP3P12645 472 aa7.1□□□□□ -1.27
CBX3-208ENST00000497498 ASAP3Q8TDY4 903 aa7.1□□□□□ -1.27
CBX3-208ENST00000497498 TMPRSS13Q9BYE2 586 aa7.1□□□□□ -1.27
CBX3-208ENST00000497498 SUGCTQ9HAC7 445 aa7.1□□□□□ -1.27
CBX3-208ENST00000497498 PCMTD2Q9NV79 361 aa7.1□□□□□ -1.27
CBX3-208ENST00000497498 KIAA1324LA8MWY0 1029 aaPredicted RBP7.09□□□□□ -1.27
CBX3-208ENST00000497498 MED26O95402 600 aa7.09□□□□□ -1.27
CBX3-208ENST00000497498 TGFB1P01137 390 aa7.09□□□□□ -1.27
CBX3-208ENST00000497498 POLR3DP05423 398 aaPredicted RBP7.09□□□□□ -1.27
CBX3-208ENST00000497498 SSTR4P31391 388 aa7.09□□□□□ -1.27
CBX3-208ENST00000497498 FDX2Q6P4F2 183 aa7.09□□□□□ -1.27
CBX3-208ENST00000497498 GALNT12Q8IXK2 581 aa7.09□□□□□ -1.27
CBX3-208ENST00000497498 DBNDD2Q9BQY9 259 aa7.09□□□□□ -1.27
CBX3-208ENST00000497498 LOC100289279A0A1B0GTE1 492 aa7.08□□□□□ -1.28
CBX3-208ENST00000497498 METTL12A8MUP2 240 aa7.08□□□□□ -1.28
CBX3-208ENST00000497498 H3BRB1 525 aa7.08□□□□□ -1.28
CBX3-208ENST00000497498 EIF4EBP3O60516 100 aaPredicted RBP7.08□□□□□ -1.28
CBX3-208ENST00000497498 COBLO75128 1261 aa7.08□□□□□ -1.28
CBX3-208ENST00000497498 DLGAP3O95886 979 aa7.08□□□□□ -1.28
CBX3-208ENST00000497498 SERPINB4P48594 390 aa7.08□□□□□ -1.28
CBX3-208ENST00000497498 ARHGAP4P98171 946 aa7.08□□□□□ -1.28
CBX3-208ENST00000497498 BEND4Q6ZU67 534 aa7.08□□□□□ -1.28
CBX3-208ENST00000497498 CCNJLQ8IV13 435 aa7.08□□□□□ -1.28
CBX3-208ENST00000497498 SMG8Q8ND04 991 aaKnown RBP7.08□□□□□ -1.28
CBX3-208ENST00000497498 TUT1Q9H6E5 874 aaKnown RBP7.08□□□□□ -1.28
CBX3-208ENST00000497498 BRPF3Q9ULD4 1205 aa7.08□□□□□ -1.28
CBX3-208ENST00000497498 A0A1W2PP55 124 aa7.07□□□□□ -1.28
CBX3-208ENST00000497498 PRR19A6NJB7 356 aa7.07□□□□□ -1.28
CBX3-208ENST00000497498 TIAF1O95411 115 aa7.07□□□□□ -1.28
CBX3-208ENST00000497498 NUTM2GQ5VZR2 741 aa7.07□□□□□ -1.28
CBX3-208ENST00000497498 GLYCTKQ8IVS8 523 aa7.07□□□□□ -1.28
CBX3-208ENST00000497498 TCF12Q99081 682 aa7.07□□□□□ -1.28
CBX3-208ENST00000497498 USP26Q9BXU7 913 aa7.07□□□□□ -1.28
CBX3-208ENST00000497498 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
CBX3-208ENST00000497498 NRSN2Q9GZP1 204 aa7.07□□□□□ -1.28
CBX3-208ENST00000497498 A0A096LPE4 126 aa7.06□□□□□ -1.28
CBX3-208ENST00000497498 A0A1W2PPZ6 126 aa7.06□□□□□ -1.28
CBX3-208ENST00000497498 INTS5Q6P9B9 1019 aaKnown RBP7.06□□□□□ -1.28
CBX3-208ENST00000497498 C12orf50Q8NA57 414 aaPredicted RBP7.06□□□□□ -1.28
CBX3-208ENST00000497498 KCNF1Q9H3M0 494 aa7.06□□□□□ -1.28
CBX3-208ENST00000497498 CYP4F12Q9HCS2 524 aa7.06□□□□□ -1.28
CBX3-208ENST00000497498 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
CBX3-208ENST00000497498 GAS2O43903 313 aaKnown RBP7.05□□□□□ -1.28
CBX3-208ENST00000497498 NEFLP07196 543 aa7.05□□□□□ -1.28
CBX3-208ENST00000497498 MAP4P27816 1152 aaKnown RBP7.05□□□□□ -1.28
CBX3-208ENST00000497498 GRIA4P48058 902 aa7.05□□□□□ -1.28
CBX3-208ENST00000497498 ZNF423Q2M1K9 1284 aa7.05□□□□□ -1.28
CBX3-208ENST00000497498 EXOSC6Q5RKV6 272 aaKnown RBP7.05□□□□□ -1.28
CBX3-208ENST00000497498 KIAA0319Q5VV43 1072 aa7.05□□□□□ -1.28
CBX3-208ENST00000497498 USPL1Q5W0Q7 1092 aa7.05□□□□□ -1.28
CBX3-208ENST00000497498 TXNDC2Q86VQ3 553 aa7.05□□□□□ -1.28
CBX3-208ENST00000497498 CITED4Q96RK1 184 aa7.05□□□□□ -1.28
CBX3-208ENST00000497498 FAM129BQ96TA1 746 aa7.05□□□□□ -1.28
CBX3-208ENST00000497498 CLEC4MQ9H2X3 399 aaPredicted RBP7.05□□□□□ -1.28
CBX3-208ENST00000497498 LIN7BQ9HAP6 207 aa7.05□□□□□ -1.28
CBX3-208ENST00000497498 NDUFB5O43674 189 aa7.04□□□□□ -1.28
CBX3-208ENST00000497498 GSTM4Q03013 218 aa7.04□□□□□ -1.28
CBX3-208ENST00000497498 PCDH1Q08174 1060 aa7.04□□□□□ -1.28
CBX3-208ENST00000497498 PDE3BQ13370 1112 aa7.04□□□□□ -1.28
CBX3-208ENST00000497498 SPRED3Q2MJR0 410 aa7.04□□□□□ -1.28
CBX3-208ENST00000497498 SGO2Q562F6 1265 aa7.04□□□□□ -1.28
CBX3-208ENST00000497498 SHKBP1Q8TBC3 707 aa7.04□□□□□ -1.28
CBX3-208ENST00000497498 IGHA2P01877 340 aa7.03□□□□□ -1.28
CBX3-208ENST00000497498 SPINK2P20155 84 aa7.03□□□□□ -1.28
CBX3-208ENST00000497498 GRIK1P39086 918 aa7.03□□□□□ -1.28
CBX3-208ENST00000497498 CPNE3O75131 537 aaKnown RBP7.02□□□□□ -1.29
CBX3-208ENST00000497498 DRD2P14416 443 aa7.02□□□□□ -1.29
CBX3-208ENST00000497498 ORC1Q13415 861 aa7.02□□□□□ -1.29
CBX3-208ENST00000497498 DTX1Q86Y01 620 aa7.02□□□□□ -1.29
CBX3-208ENST00000497498 C2CD4AQ8NCU7 369 aaPredicted RBP7.02□□□□□ -1.29
CBX3-208ENST00000497498 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
CBX3-208ENST00000497498 B3GALT4O96024 378 aa7.01□□□□□ -1.29
CBX3-208ENST00000497498 CYP11A1P05108 521 aa7.01□□□□□ -1.29
CBX3-208ENST00000497498 ITPKAP23677 461 aa7.01□□□□□ -1.29
CBX3-208ENST00000497498 SOX4Q06945 474 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 398.7 ms