RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 HOXB7P09629 217 aa11.79□□□□□ -0.52
BRD9-209ENST00000490814 EPHA10Q5JZY3 1008 aa11.79□□□□□ -0.52
BRD9-209ENST00000490814 IL17RAQ96F46 866 aa11.79□□□□□ -0.52
BRD9-209ENST00000490814 CCDC69A6NI79 296 aa11.79□□□□□ -0.52
BRD9-209ENST00000490814 TATP17735 454 aaPredicted RBP11.79□□□□□ -0.52
BRD9-209ENST00000490814 APOBRQ0VD83 1088 aa11.79□□□□□ -0.52
BRD9-209ENST00000490814 CCDC91Q7Z6B0 441 aa11.79□□□□□ -0.52
BRD9-209ENST00000490814 LRRC8AQ8IWT6 810 aa11.79□□□□□ -0.52
BRD9-209ENST00000490814 DBNDD2Q9BQY9 259 aa11.79□□□□□ -0.52
BRD9-209ENST00000490814 TAF5LO75529 589 aa11.79□□□□□ -0.52
BRD9-209ENST00000490814 SLU7O95391 586 aaKnown RBP11.79□□□□□ -0.52
BRD9-209ENST00000490814 MUM1L1Q5H9M0 696 aa11.79□□□□□ -0.52
BRD9-209ENST00000490814 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.79□□□□□ -0.52
BRD9-209ENST00000490814 CFAP45Q9UL16 551 aa11.79□□□□□ -0.52
BRD9-209ENST00000490814 AKAP12Q02952 1782 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 EXOC5O00471 708 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 ERCC6LQ2NKX8 1250 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 KRBA2Q6ZNG9 492 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 PLA2G4DQ86XP0 818 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 HOMER1Q86YM7 354 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 TXLNBQ8N3L3 684 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 SGSM3Q96HU1 749 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 KAZALD1Q96I82 304 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 ZNF446Q9NWS9 450 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 MTX1Q13505 466 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 KRT32Q14532 448 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 ROBO1Q9Y6N7 1651 aa11.78□□□□□ -0.52
BRD9-209ENST00000490814 A0A1B0GUL7 405 aa11.77□□□□□ -0.52
BRD9-209ENST00000490814 BIN1O00499 593 aa11.77□□□□□ -0.52
BRD9-209ENST00000490814 AMOTQ4VCS5 1084 aa11.77□□□□□ -0.52
BRD9-209ENST00000490814 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.77□□□□□ -0.52
BRD9-209ENST00000490814 TTC5Q8N0Z6 440 aa11.77□□□□□ -0.52
BRD9-209ENST00000490814 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.52
BRD9-209ENST00000490814 ERO1AQ96HE7 468 aa11.77□□□□□ -0.52
BRD9-209ENST00000490814 DDX21Q9NR30 783 aaKnown RBP eCLIP11.77□□□□□ -0.52
BRD9-209ENST00000490814 DBNLQ9UJU6 430 aaKnown RBP11.77□□□□□ -0.52
BRD9-209ENST00000490814 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
BRD9-209ENST00000490814 A0A087WZG4 1122 aa11.77□□□□□ -0.53
BRD9-209ENST00000490814 IGKV5-2P06315 115 aa11.77□□□□□ -0.53
BRD9-209ENST00000490814 TEX35Q5T0J7 233 aa11.77□□□□□ -0.53
BRD9-209ENST00000490814 C11orf57Q6ZUT1 292 aaPredicted RBP11.77□□□□□ -0.53
BRD9-209ENST00000490814 FSIP1Q8NA03 581 aa11.77□□□□□ -0.53
BRD9-209ENST00000490814 NEK11Q8NG66 645 aa11.77□□□□□ -0.53
BRD9-209ENST00000490814 TDRD7Q8NHU6 1098 aaKnown RBP11.77□□□□□ -0.53
BRD9-209ENST00000490814 HMG20BQ9P0W2 317 aa11.77□□□□□ -0.53
BRD9-209ENST00000490814 BMS1Q14692 1282 aaKnown RBP11.77□□□□□ -0.53
BRD9-209ENST00000490814 OTUD7BQ6GQQ9 843 aa11.77□□□□□ -0.53
BRD9-209ENST00000490814 ISM2Q6H9L7 571 aa11.77□□□□□ -0.53
BRD9-209ENST00000490814 CCDC191Q8NCU4 936 aa11.77□□□□□ -0.53
BRD9-209ENST00000490814 CWC15Q9P013 229 aaKnown RBP11.77□□□□□ -0.53
BRD9-209ENST00000490814 PXDNLA1KZ92 1463 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 SMC2O95347 1197 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 CYP21A2P08686 494 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 KCNQ4P56696 695 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 RBM6P78332 1123 aaKnown RBP11.76□□□□□ -0.53
BRD9-209ENST00000490814 DDB1Q16531 1140 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 CCDC85AQ96PX6 553 aaPredicted RBP11.76□□□□□ -0.53
BRD9-209ENST00000490814 MED4Q9NPJ6 270 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 ELP1O95163 1332 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 POLR3DP05423 398 aaPredicted RBP11.76□□□□□ -0.53
BRD9-209ENST00000490814 ATP2B1P20020 1258 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 RXRBP28702 533 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 HAND2P61296 217 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 TTC31Q49AM3 519 aaPredicted RBP11.76□□□□□ -0.53
BRD9-209ENST00000490814 PTPDC1A2A3K4 754 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 SCRN1Q12765 414 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 SNW1Q13573 536 aaKnown RBP11.76□□□□□ -0.53
BRD9-209ENST00000490814 GCKRQ14397 625 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 TNNI3KQ59H18 835 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 NOM1Q5C9Z4 860 aaKnown RBP11.76□□□□□ -0.53
BRD9-209ENST00000490814 POTEAQ6S8J7 498 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 AOPEPQ8N6M6 819 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 LCMT1Q9UIC8 334 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 FPGT-TNNI3KV9GXZ4 949 aa11.76□□□□□ -0.53
BRD9-209ENST00000490814 CEMIPQ8WUJ3 1361 aa11.75□□□□□ -0.53
BRD9-209ENST00000490814 NEURL1BA8MQ27 555 aa11.75□□□□□ -0.53
BRD9-209ENST00000490814 TIMM10P62072 90 aa11.75□□□□□ -0.53
BRD9-209ENST00000490814 SNRKQ9NRH2 765 aa11.75□□□□□ -0.53
BRD9-209ENST00000490814 FAM53CQ9NYF3 392 aa11.75□□□□□ -0.53
BRD9-209ENST00000490814 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
BRD9-209ENST00000490814 ERBB3P21860 1342 aa11.75□□□□□ -0.53
BRD9-209ENST00000490814 FKBP4Q02790 459 aaKnown RBP eCLIP11.75□□□□□ -0.53
BRD9-209ENST00000490814 WASHC4Q2M389 1173 aa11.75□□□□□ -0.53
BRD9-209ENST00000490814 MCMDC2Q4G0Z9 681 aa11.75□□□□□ -0.53
BRD9-209ENST00000490814 LRCH2Q5VUJ6 765 aa11.75□□□□□ -0.53
BRD9-209ENST00000490814 USP28Q96RU2 1077 aa11.75□□□□□ -0.53
BRD9-209ENST00000490814 TRPC5Q9UL62 973 aaPredicted RBP11.75□□□□□ -0.53
BRD9-209ENST00000490814 NWD1Q149M9 1564 aa11.75□□□□□ -0.53
BRD9-209ENST00000490814 STX1AQ16623 288 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 ARHGAP29Q52LW3 1261 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 LMBR1LQ6UX01 489 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 SEPT12Q8IYM1 358 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 A0A1B0GVL5 298 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 RESTQ13127 1097 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 STK38Q15208 465 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 E2F4Q16254 413 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 RBM28Q9NW13 759 aaKnown RBP11.74□□□□□ -0.53
BRD9-209ENST00000490814 NEMFO60524 1076 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms