RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
AC055748.1-201ENST00000489836 ZBBXA8MT70 800 aa13.1□□□□□ -0.31
AC055748.1-201ENST00000489836 CBLBQ13191 982 aa13.1□□□□□ -0.31
AC055748.1-201ENST00000489836 SCARF1Q14162 830 aa13.1□□□□□ -0.31
AC055748.1-201ENST00000489836 MEIOBQ8N635 442 aa13.1□□□□□ -0.31
AC055748.1-201ENST00000489836 PNISRQ8TF01 805 aaKnown RBP13.1□□□□□ -0.31
AC055748.1-201ENST00000489836 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
AC055748.1-201ENST00000489836 ANP32CO43423 234 aa13.09□□□□□ -0.31
AC055748.1-201ENST00000489836 STARD3NLO95772 234 aa13.09□□□□□ -0.31
AC055748.1-201ENST00000489836 GYS1P13807 737 aa13.09□□□□□ -0.31
AC055748.1-201ENST00000489836 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
AC055748.1-201ENST00000489836 NLGN1Q8N2Q7 840 aa13.09□□□□□ -0.31
AC055748.1-201ENST00000489836 THUMPD2Q9BTF0 503 aaKnown RBP13.09□□□□□ -0.31
AC055748.1-201ENST00000489836 DLG5Q8TDM6 1919 aa13.09□□□□□ -0.31
AC055748.1-201ENST00000489836 SOBPA7XYQ1 873 aa13.08□□□□□ -0.32
AC055748.1-201ENST00000489836 RFC4P35249 363 aa13.08□□□□□ -0.32
AC055748.1-201ENST00000489836 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.32
AC055748.1-201ENST00000489836 BABAM1Q9NWV8 329 aa13.08□□□□□ -0.32
AC055748.1-201ENST00000489836 MIS18AQ9NYP9 233 aa13.08□□□□□ -0.32
AC055748.1-201ENST00000489836 NDUFB9Q9Y6M9 179 aa13.08□□□□□ -0.32
AC055748.1-201ENST00000489836 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
AC055748.1-201ENST00000489836 SNRPA1P09661 255 aaKnown RBP13.07□□□□□ -0.32
AC055748.1-201ENST00000489836 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
AC055748.1-201ENST00000489836 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
AC055748.1-201ENST00000489836 NBPF20Q3BBV1 942 aa13.07□□□□□ -0.32
AC055748.1-201ENST00000489836 LINC00528Q8N1L1 170 aa13.07□□□□□ -0.32
AC055748.1-201ENST00000489836 TMPRSS4Q9NRS4 437 aa13.07□□□□□ -0.32
AC055748.1-201ENST00000489836 PCDHB9Q9Y5E1 797 aa13.07□□□□□ -0.32
AC055748.1-201ENST00000489836 USP16Q9Y5T5 823 aa13.07□□□□□ -0.32
AC055748.1-201ENST00000489836 PRAMEF22A3QJZ6 481 aa13.06□□□□□ -0.32
AC055748.1-201ENST00000489836 IL6STP40189 918 aaPredicted RBP13.06□□□□□ -0.32
AC055748.1-201ENST00000489836 PGPEP1Q9NXJ5 209 aa13.06□□□□□ -0.32
AC055748.1-201ENST00000489836 SRP68Q9UHB9 627 aaKnown RBP13.06□□□□□ -0.32
AC055748.1-201ENST00000489836 NARFQ9UHQ1 456 aa13.06□□□□□ -0.32
AC055748.1-201ENST00000489836 RRP7AQ9Y3A4 280 aaKnown RBP13.06□□□□□ -0.32
AC055748.1-201ENST00000489836 CD2APQ9Y5K6 639 aa13.06□□□□□ -0.32
AC055748.1-201ENST00000489836 COL15A1P39059 1388 aa13.06□□□□□ -0.32
AC055748.1-201ENST00000489836 A1BGP04217 495 aa13.05□□□□□ -0.32
AC055748.1-201ENST00000489836 MMP10P09238 476 aa13.05□□□□□ -0.32
AC055748.1-201ENST00000489836 BMP2P12643 396 aa13.05□□□□□ -0.32
AC055748.1-201ENST00000489836 CANXP27824 592 aaKnown RBP13.05□□□□□ -0.32
AC055748.1-201ENST00000489836 TM4SF1P30408 202 aa13.05□□□□□ -0.32
AC055748.1-201ENST00000489836 TREML4Q6UXN2 200 aa13.05□□□□□ -0.32
AC055748.1-201ENST00000489836 C4AP0C0L4 1744 aa13.05□□□□□ -0.32
AC055748.1-201ENST00000489836 KDM3BQ7LBC6 1761 aa13.04□□□□□ -0.32
AC055748.1-201ENST00000489836 GIGYF1O75420 1035 aaPredicted RBP13.04□□□□□ -0.32
AC055748.1-201ENST00000489836 DHX9Q08211 1270 aaKnown RBP13.04□□□□□ -0.32
AC055748.1-201ENST00000489836 NLGN2Q8NFZ4 835 aa13.04□□□□□ -0.32
AC055748.1-201ENST00000489836 A0A087WZG4 1122 aa13.03□□□□□ -0.32
AC055748.1-201ENST00000489836 CHL1O00533 1208 aa13.03□□□□□ -0.32
AC055748.1-201ENST00000489836 APAF1O14727 1248 aa13.03□□□□□ -0.32
AC055748.1-201ENST00000489836 NFX1Q12986 1120 aaKnown RBP13.03□□□□□ -0.32
AC055748.1-201ENST00000489836 LCE2AQ5TA79 106 aaPredicted RBP13.03□□□□□ -0.32
AC055748.1-201ENST00000489836 USPL1Q5W0Q7 1092 aa13.03□□□□□ -0.32
AC055748.1-201ENST00000489836 TBC1D2BQ9UPU7 963 aa13.03□□□□□ -0.32
AC055748.1-201ENST00000489836 ERVH48-1M5A8F1 160 aa13.02□□□□□ -0.33
AC055748.1-201ENST00000489836 UPP2O95045 317 aa13.02□□□□□ -0.33
AC055748.1-201ENST00000489836 NR1H3Q13133 447 aa13.02□□□□□ -0.33
AC055748.1-201ENST00000489836 NBPF10Q6P3W6 841 aaKnown RBP13.02□□□□□ -0.33
AC055748.1-201ENST00000489836 NBPF15Q8N660 670 aa13.02□□□□□ -0.33
AC055748.1-201ENST00000489836 MRS2Q9HD23 443 aa13.02□□□□□ -0.33
AC055748.1-201ENST00000489836 TSPYL4Q9UJ04 414 aa13.02□□□□□ -0.33
AC055748.1-201ENST00000489836 ESPNB1AK53 854 aa13.01□□□□□ -0.33
AC055748.1-201ENST00000489836 TERTO14746 1132 aaKnown RBP13.01□□□□□ -0.33
AC055748.1-201ENST00000489836 DDR1Q08345 913 aa13.01□□□□□ -0.33
AC055748.1-201ENST00000489836 Q6ZVU0 165 aa13.01□□□□□ -0.33
AC055748.1-201ENST00000489836 ZNF784Q8NCA9 323 aaPredicted RBP13.01□□□□□ -0.33
AC055748.1-201ENST00000489836 AGBL1Q96MI9 1066 aa13.01□□□□□ -0.33
AC055748.1-201ENST00000489836 POLRMTO00411 1230 aaKnown RBP13□□□□□ -0.33
AC055748.1-201ENST00000489836 WFS1O76024 890 aa13□□□□□ -0.33
AC055748.1-201ENST00000489836 CAMTA2O94983 1202 aa13□□□□□ -0.33
AC055748.1-201ENST00000489836 ZNF853P0CG23 659 aa13□□□□□ -0.33
AC055748.1-201ENST00000489836 VEGFBP49765 207 aa13□□□□□ -0.33
AC055748.1-201ENST00000489836 LCE2CQ5TA81 110 aa13□□□□□ -0.33
AC055748.1-201ENST00000489836 PARP3Q9Y6F1 533 aa13□□□□□ -0.33
AC055748.1-201ENST00000489836 C10orf71Q711Q0 1435 aa12.99□□□□□ -0.33
AC055748.1-201ENST00000489836 APBB1O00213 710 aa12.99□□□□□ -0.33
AC055748.1-201ENST00000489836 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
AC055748.1-201ENST00000489836 NFIXQ14938 502 aa12.99□□□□□ -0.33
AC055748.1-201ENST00000489836 CCDC27Q2M243 656 aa12.99□□□□□ -0.33
AC055748.1-201ENST00000489836 TSEN34Q9BSV6 310 aaKnown RBP12.99□□□□□ -0.33
AC055748.1-201ENST00000489836 ERBB4Q15303 1308 aa12.98□□□□□ -0.33
AC055748.1-201ENST00000489836 TGFB2P61812 414 aa12.98□□□□□ -0.33
AC055748.1-201ENST00000489836 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
AC055748.1-201ENST00000489836 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
AC055748.1-201ENST00000489836 LRP10Q7Z4F1 713 aa12.97□□□□□ -0.33
AC055748.1-201ENST00000489836 KIF13BQ9NQT8 1826 aa12.97□□□□□ -0.33
AC055748.1-201ENST00000489836 LAMB4A4D0S4 1761 aa12.97□□□□□ -0.33
AC055748.1-201ENST00000489836 MAN1A2O60476 641 aa12.96□□□□□ -0.33
AC055748.1-201ENST00000489836 LILRA1O75019 489 aa12.96□□□□□ -0.33
AC055748.1-201ENST00000489836 SERPINB2P05120 415 aa12.96□□□□□ -0.33
AC055748.1-201ENST00000489836 ADD1P35611 737 aaKnown RBP12.96□□□□□ -0.33
AC055748.1-201ENST00000489836 RELBQ01201 579 aa12.96□□□□□ -0.33
AC055748.1-201ENST00000489836 NPM2Q86SE8 214 aaKnown RBP12.96□□□□□ -0.33
AC055748.1-201ENST00000489836 IFT57Q9NWB7 429 aa12.96□□□□□ -0.33
AC055748.1-201ENST00000489836 NXF1Q9UBU9 619 aaKnown RBP12.96□□□□□ -0.33
AC055748.1-201ENST00000489836 ZNF330Q9Y3S2 320 aaPredicted RBP12.96□□□□□ -0.33
AC055748.1-201ENST00000489836 PXDNLA1KZ92 1463 aa12.96□□□□□ -0.34
AC055748.1-201ENST00000489836 HOXB7P09629 217 aa12.95□□□□□ -0.34
AC055748.1-201ENST00000489836 YBX3P16989 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms