RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ZFYVE28Q9HCC9 887 aa8.06□□□□□ -1.12
CCDC66-221ENST00000487739 IGLV1-40P01703 118 aa8.05□□□□□ -1.12
CCDC66-221ENST00000487739 VN1R5Q7Z5H4 357 aa8.05□□□□□ -1.12
CCDC66-221ENST00000487739 GLYCTKQ8IVS8 523 aa8.05□□□□□ -1.12
CCDC66-221ENST00000487739 ASAP3Q8TDY4 903 aa8.05□□□□□ -1.12
CCDC66-221ENST00000487739 RUSC1Q9BVN2 902 aa8.05□□□□□ -1.12
CCDC66-221ENST00000487739 BRPF3Q9ULD4 1205 aa8.05□□□□□ -1.12
CCDC66-221ENST00000487739 SERPINB4P48594 390 aa8.04□□□□□ -1.12
CCDC66-221ENST00000487739 PEAR1Q5VY43 1037 aaPredicted RBP8.04□□□□□ -1.12
CCDC66-221ENST00000487739 FDX2Q6P4F2 183 aa8.04□□□□□ -1.12
CCDC66-221ENST00000487739 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
CCDC66-221ENST00000487739 LATS2Q9NRM7 1088 aa8.04□□□□□ -1.12
CCDC66-221ENST00000487739 SOX1O00570 391 aaPredicted RBP8.03□□□□□ -1.12
CCDC66-221ENST00000487739 ERICH6Q7L0X2 663 aa8.03□□□□□ -1.12
CCDC66-221ENST00000487739 KRTAP4-8Q9BYQ9 185 aa8.03□□□□□ -1.12
CCDC66-221ENST00000487739 SOX17Q9H6I2 414 aaPredicted RBP8.03□□□□□ -1.12
CCDC66-221ENST00000487739 C7orf69Q9H7B7 122 aa8.03□□□□□ -1.12
CCDC66-221ENST00000487739 NDUFB5O43674 189 aa8.02□□□□□ -1.13
CCDC66-221ENST00000487739 PREPP48147 710 aa8.02□□□□□ -1.13
CCDC66-221ENST00000487739 NFIAQ12857 509 aa8.02□□□□□ -1.13
CCDC66-221ENST00000487739 HGSNATQ68CP4 663 aa8.02□□□□□ -1.13
CCDC66-221ENST00000487739 FAM20CQ8IXL6 584 aa8.02□□□□□ -1.13
CCDC66-221ENST00000487739 PCMTD2Q9NV79 361 aa8.02□□□□□ -1.13
CCDC66-221ENST00000487739 HIF3AQ9Y2N7 669 aa8.02□□□□□ -1.13
CCDC66-221ENST00000487739 MEGF11A6BM72 1044 aa8.01□□□□□ -1.13
CCDC66-221ENST00000487739 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
CCDC66-221ENST00000487739 POLR3DP05423 398 aaPredicted RBP8.01□□□□□ -1.13
CCDC66-221ENST00000487739 NEFLP07196 543 aa8.01□□□□□ -1.13
CCDC66-221ENST00000487739 ESRRAP11474 423 aaPredicted RBP8.01□□□□□ -1.13
CCDC66-221ENST00000487739 CLEC10AQ8IUN9 316 aa8.01□□□□□ -1.13
CCDC66-221ENST00000487739 TRIM42Q8IWZ5 723 aa8.01□□□□□ -1.13
CCDC66-221ENST00000487739 ARID3AQ99856 593 aa8.01□□□□□ -1.13
CCDC66-221ENST00000487739 USP26Q9BXU7 913 aa8.01□□□□□ -1.13
CCDC66-221ENST00000487739 KCNF1Q9H3M0 494 aa8.01□□□□□ -1.13
CCDC66-221ENST00000487739 HMX2A2RU54 273 aa8□□□□□ -1.13
CCDC66-221ENST00000487739 GAS2O43903 313 aaKnown RBP8□□□□□ -1.13
CCDC66-221ENST00000487739 BMP3P12645 472 aa8□□□□□ -1.13
CCDC66-221ENST00000487739 NUTM2GQ5VZR2 741 aa8□□□□□ -1.13
CCDC66-221ENST00000487739 RNF43Q68DV7 783 aa8□□□□□ -1.13
CCDC66-221ENST00000487739 GALNT12Q8IXK2 581 aa8□□□□□ -1.13
CCDC66-221ENST00000487739 FAM83CQ9BQN1 747 aa8□□□□□ -1.13
CCDC66-221ENST00000487739 DBNDD2Q9BQY9 259 aa8□□□□□ -1.13
CCDC66-221ENST00000487739 LOC100289279A0A1B0GTE1 492 aa7.99□□□□□ -1.13
CCDC66-221ENST00000487739 METTL12A8MUP2 240 aa7.99□□□□□ -1.13
CCDC66-221ENST00000487739 SSTR4P31391 388 aa7.99□□□□□ -1.13
CCDC66-221ENST00000487739 CD97P48960 835 aa7.99□□□□□ -1.13
CCDC66-221ENST00000487739 PDE4CQ08493 712 aa7.99□□□□□ -1.13
CCDC66-221ENST00000487739 PDE3BQ13370 1112 aa7.99□□□□□ -1.13
CCDC66-221ENST00000487739 BEND4Q6ZU67 534 aa7.99□□□□□ -1.13
CCDC66-221ENST00000487739 CCNJLQ8IV13 435 aa7.99□□□□□ -1.13
CCDC66-221ENST00000487739 CYP4F12Q9HCS2 524 aa7.99□□□□□ -1.13
CCDC66-221ENST00000487739 A0A096LPE4 126 aa7.98□□□□□ -1.13
CCDC66-221ENST00000487739 A0A1W2PP55 124 aa7.98□□□□□ -1.13
CCDC66-221ENST00000487739 A0A1W2PPZ6 126 aa7.98□□□□□ -1.13
CCDC66-221ENST00000487739 COBLO75128 1261 aa7.98□□□□□ -1.13
CCDC66-221ENST00000487739 TGFB1P01137 390 aa7.98□□□□□ -1.13
CCDC66-221ENST00000487739 ARHGAP4P98171 946 aa7.98□□□□□ -1.13
CCDC66-221ENST00000487739 GSTM4Q03013 218 aa7.98□□□□□ -1.13
CCDC66-221ENST00000487739 ECM1Q16610 540 aa7.98□□□□□ -1.13
CCDC66-221ENST00000487739 ZDHHC13Q8IUH4 622 aa7.98□□□□□ -1.13
CCDC66-221ENST00000487739 SMG8Q8ND04 991 aaKnown RBP7.98□□□□□ -1.13
CCDC66-221ENST00000487739 TMPRSS13Q9BYE2 586 aa7.98□□□□□ -1.13
CCDC66-221ENST00000487739 LIN7BQ9HAP6 207 aa7.98□□□□□ -1.13
CCDC66-221ENST00000487739 TXNDC2Q86VQ3 553 aa7.97□□□□□ -1.13
CCDC66-221ENST00000487739 C12orf50Q8NA57 414 aaPredicted RBP7.97□□□□□ -1.13
CCDC66-221ENST00000487739 RETREG2Q8NC44 543 aa7.97□□□□□ -1.13
CCDC66-221ENST00000487739 PSMG3-AS1Q96PY0 264 aa7.97□□□□□ -1.13
CCDC66-221ENST00000487739 CITED4Q96RK1 184 aa7.97□□□□□ -1.13
CCDC66-221ENST00000487739 FAM129BQ96TA1 746 aa7.97□□□□□ -1.13
CCDC66-221ENST00000487739 CLEC4MQ9H2X3 399 aaPredicted RBP7.97□□□□□ -1.13
CCDC66-221ENST00000487739 SUGCTQ9HAC7 445 aa7.97□□□□□ -1.13
CCDC66-221ENST00000487739 GRIK1P39086 918 aa7.96□□□□□ -1.14
CCDC66-221ENST00000487739 PCDH1Q08174 1060 aa7.96□□□□□ -1.14
CCDC66-221ENST00000487739 TCF12Q99081 682 aa7.96□□□□□ -1.14
CCDC66-221ENST00000487739 CPNE3O75131 537 aaKnown RBP7.95□□□□□ -1.14
CCDC66-221ENST00000487739 TIAF1O95411 115 aa7.95□□□□□ -1.14
CCDC66-221ENST00000487739 MAP4P27816 1152 aaKnown RBP7.95□□□□□ -1.14
CCDC66-221ENST00000487739 GRIA4P48058 902 aa7.95□□□□□ -1.14
CCDC66-221ENST00000487739 EXOSC6Q5RKV6 272 aaKnown RBP7.95□□□□□ -1.14
CCDC66-221ENST00000487739 KIAA0319Q5VV43 1072 aa7.95□□□□□ -1.14
CCDC66-221ENST00000487739 USPL1Q5W0Q7 1092 aa7.95□□□□□ -1.14
CCDC66-221ENST00000487739 INTS5Q6P9B9 1019 aaKnown RBP7.95□□□□□ -1.14
CCDC66-221ENST00000487739 KIAA1324LA8MWY0 1029 aaPredicted RBP7.94□□□□□ -1.14
CCDC66-221ENST00000487739 SUPT5HO00267 1087 aaKnown RBP7.94□□□□□ -1.14
CCDC66-221ENST00000487739 DLGAP3O95886 979 aa7.94□□□□□ -1.14
CCDC66-221ENST00000487739 RXRBP28702 533 aa7.94□□□□□ -1.14
CCDC66-221ENST00000487739 ORC1Q13415 861 aa7.94□□□□□ -1.14
CCDC66-221ENST00000487739 SPRED3Q2MJR0 410 aa7.94□□□□□ -1.14
CCDC66-221ENST00000487739 SGO2Q562F6 1265 aa7.94□□□□□ -1.14
CCDC66-221ENST00000487739 HP1BP3Q5SSJ5 553 aaPredicted RBP7.94□□□□□ -1.14
CCDC66-221ENST00000487739 SHKBP1Q8TBC3 707 aa7.94□□□□□ -1.14
CCDC66-221ENST00000487739 CCER1Q8TC90 406 aaPredicted RBP7.94□□□□□ -1.14
CCDC66-221ENST00000487739 NRSN2Q9GZP1 204 aa7.94□□□□□ -1.14
CCDC66-221ENST00000487739 EHD4Q9H223 541 aa7.94□□□□□ -1.14
CCDC66-221ENST00000487739 NPHS2Q9NP85 383 aa7.94□□□□□ -1.14
CCDC66-221ENST00000487739 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.93□□□□□ -1.14
CCDC66-221ENST00000487739 CYP11A1P05108 521 aa7.93□□□□□ -1.14
CCDC66-221ENST00000487739 ZNF423Q2M1K9 1284 aa7.93□□□□□ -1.14
CCDC66-221ENST00000487739 DDX54Q8TDD1 881 aaKnown RBP7.93□□□□□ -1.14
CCDC66-221ENST00000487739 TMC1Q8TDI8 760 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms