RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 COL1A1P02452 1464 aaPredicted RBP10.18□□□□□ -0.78
SYN3-212ENST00000483062 PDE8AO60658 829 aa10.18□□□□□ -0.78
SYN3-212ENST00000483062 HOXB7P09629 217 aa10.18□□□□□ -0.78
SYN3-212ENST00000483062 CCDC152Q4G0S7 254 aa10.18□□□□□ -0.78
SYN3-212ENST00000483062 TXNRD3Q86VQ6 643 aa10.18□□□□□ -0.78
SYN3-212ENST00000483062 COA1Q9GZY4 146 aa10.18□□□□□ -0.78
SYN3-212ENST00000483062 PRKRIP1Q9H875 184 aaPredicted RBP10.18□□□□□ -0.78
SYN3-212ENST00000483062 MINPP1Q9UNW1 487 aa10.18□□□□□ -0.78
SYN3-212ENST00000483062 FARP1Q9Y4F1 1045 aaPredicted RBP10.18□□□□□ -0.78
SYN3-212ENST00000483062 CACNA1FO60840 1977 aa10.17□□□□□ -0.78
SYN3-212ENST00000483062 USP2O75604 605 aaPredicted RBP10.17□□□□□ -0.78
SYN3-212ENST00000483062 PCCAP05165 728 aaPredicted RBP10.17□□□□□ -0.78
SYN3-212ENST00000483062 NBPF11Q86T75 865 aa10.17□□□□□ -0.78
SYN3-212ENST00000483062 RUNDC1Q96C34 613 aa10.17□□□□□ -0.78
SYN3-212ENST00000483062 SHISA4Q96DD7 197 aa10.17□□□□□ -0.78
SYN3-212ENST00000483062 BSDC1Q9NW68 430 aaPredicted RBP10.17□□□□□ -0.78
SYN3-212ENST00000483062 DBF4Q9UBU7 674 aaPredicted RBP10.17□□□□□ -0.78
SYN3-212ENST00000483062 TRIM35Q9UPQ4 493 aa10.17□□□□□ -0.78
SYN3-212ENST00000483062 PPP2R3BQ9Y5P8 575 aa10.17□□□□□ -0.78
SYN3-212ENST00000483062 ZNF646O15015 1829 aaPredicted RBP10.17□□□□□ -0.78
SYN3-212ENST00000483062 LAMB1P07942 1786 aa10.16□□□□□ -0.78
SYN3-212ENST00000483062 PPP1R12BO60237 982 aaPredicted RBP10.16□□□□□ -0.78
SYN3-212ENST00000483062 HSP90B1P14625 803 aaKnown RBP10.16□□□□□ -0.78
SYN3-212ENST00000483062 SLC9C1Q4G0N8 1177 aa10.16□□□□□ -0.78
SYN3-212ENST00000483062 HDGFL1Q5TGJ6 251 aa10.16□□□□□ -0.78
SYN3-212ENST00000483062 OTUD7BQ6GQQ9 843 aa10.16□□□□□ -0.78
SYN3-212ENST00000483062 ANKRD18AQ8IVF6 992 aa10.16□□□□□ -0.78
SYN3-212ENST00000483062 CCDC191Q8NCU4 936 aa10.16□□□□□ -0.78
SYN3-212ENST00000483062 HYPKQ9NX55 129 aa10.16□□□□□ -0.78
SYN3-212ENST00000483062 ZNF804BA4D1E1 1349 aa10.15□□□□□ -0.78
SYN3-212ENST00000483062 SPEF2Q9C093 1822 aa10.15□□□□□ -0.78
SYN3-212ENST00000483062 GABBR2O75899 941 aa10.15□□□□□ -0.78
SYN3-212ENST00000483062 CCT4P50991 539 aaKnown RBP10.15□□□□□ -0.78
SYN3-212ENST00000483062 WDR43Q15061 677 aaKnown RBP eCLIP10.15□□□□□ -0.78
SYN3-212ENST00000483062 SLC4A8Q2Y0W8 1093 aa10.15□□□□□ -0.78
SYN3-212ENST00000483062 NBPF12Q5TAG4 269 aaPredicted RBP10.15□□□□□ -0.78
SYN3-212ENST00000483062 TTLL5Q6EMB2 1281 aa10.15□□□□□ -0.78
SYN3-212ENST00000483062 KIAA0825Q8IV33 1275 aa10.15□□□□□ -0.78
SYN3-212ENST00000483062 CCDC146Q8IYE0 955 aa10.15□□□□□ -0.78
SYN3-212ENST00000483062 CERS5Q8N5B7 392 aa10.15□□□□□ -0.78
SYN3-212ENST00000483062 BRI3BPQ8WY22 251 aa10.15□□□□□ -0.78
SYN3-212ENST00000483062 PCDHAC2Q9Y5I4 1007 aa10.15□□□□□ -0.78
SYN3-212ENST00000483062 AOX1Q06278 1338 aa10.14□□□□□ -0.79
SYN3-212ENST00000483062 IRS2Q9Y4H2 1338 aa10.14□□□□□ -0.79
SYN3-212ENST00000483062 MNX1P50219 401 aaPredicted RBP10.14□□□□□ -0.79
SYN3-212ENST00000483062 SUPT20HL1Q3ZLR7 823 aa10.14□□□□□ -0.79
SYN3-212ENST00000483062 TTLL11Q8NHH1 800 aa10.14□□□□□ -0.79
SYN3-212ENST00000483062 CCDC85AQ96PX6 553 aaPredicted RBP10.14□□□□□ -0.79
SYN3-212ENST00000483062 ADAMTS8Q9UP79 889 aa10.14□□□□□ -0.79
SYN3-212ENST00000483062 LEMD3Q9Y2U8 911 aa10.14□□□□□ -0.79
SYN3-212ENST00000483062 UNC80Q8N2C7 3258 aa10.14□□□□□ -0.79
SYN3-212ENST00000483062 A0A1W2PPC1 479 aa10.13□□□□□ -0.79
SYN3-212ENST00000483062 SOX1O00570 391 aaPredicted RBP10.13□□□□□ -0.79
SYN3-212ENST00000483062 KLRK1P26718 216 aa10.13□□□□□ -0.79
SYN3-212ENST00000483062 CTSWP56202 376 aa10.13□□□□□ -0.79
SYN3-212ENST00000483062 GTF2IP78347 998 aa10.13□□□□□ -0.79
SYN3-212ENST00000483062 ARHGEF6Q15052 776 aa10.13□□□□□ -0.79
SYN3-212ENST00000483062 NEUROD2Q15784 382 aa10.13□□□□□ -0.79
SYN3-212ENST00000483062 ANKRD13AQ8IZ07 590 aa10.13□□□□□ -0.79
SYN3-212ENST00000483062 SH3TC2Q8TF17 1288 aa10.13□□□□□ -0.79
SYN3-212ENST00000483062 JARID2Q92833 1246 aaPredicted RBP10.13□□□□□ -0.79
SYN3-212ENST00000483062 OPTNQ96CV9 577 aa10.13□□□□□ -0.79
SYN3-212ENST00000483062 PRMT6Q96LA8 375 aaPredicted RBP10.13□□□□□ -0.79
SYN3-212ENST00000483062 CDC5LQ99459 802 aaKnown RBP10.13□□□□□ -0.79
SYN3-212ENST00000483062 ZNF853P0CG23 659 aa10.12□□□□□ -0.79
SYN3-212ENST00000483062 IREB2P48200 963 aaKnown RBP10.12□□□□□ -0.79
SYN3-212ENST00000483062 MTFR1Q15390 333 aa10.12□□□□□ -0.79
SYN3-212ENST00000483062 DLGAP5Q15398 846 aa10.12□□□□□ -0.79
SYN3-212ENST00000483062 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.12□□□□□ -0.79
SYN3-212ENST00000483062 RIC3Q7Z5B4 369 aa10.12□□□□□ -0.79
SYN3-212ENST00000483062 FAM43AQ8N2R8 423 aa10.12□□□□□ -0.79
SYN3-212ENST00000483062 MYD88Q99836 296 aa10.12□□□□□ -0.79
SYN3-212ENST00000483062 ARHGAP39Q9C0H5 1083 aa10.12□□□□□ -0.79
SYN3-212ENST00000483062 GREM2Q9H772 168 aa10.12□□□□□ -0.79
SYN3-212ENST00000483062 PHAXQ9H814 394 aaKnown RBP10.12□□□□□ -0.79
SYN3-212ENST00000483062 ZFYVE28Q9HCC9 887 aa10.12□□□□□ -0.79
SYN3-212ENST00000483062 CWC25Q9NXE8 425 aaPredicted RBP10.12□□□□□ -0.79
SYN3-212ENST00000483062 CCER2I3L3R5 266 aa10.11□□□□□ -0.79
SYN3-212ENST00000483062 ZBTB7BO15156 539 aaPredicted RBP10.11□□□□□ -0.79
SYN3-212ENST00000483062 TLR2O60603 784 aa10.11□□□□□ -0.79
SYN3-212ENST00000483062 GNRH1P01148 92 aa10.11□□□□□ -0.79
SYN3-212ENST00000483062 GJA8P48165 433 aa10.11□□□□□ -0.79
SYN3-212ENST00000483062 LACTBP83111 547 aaPredicted RBP10.11□□□□□ -0.79
SYN3-212ENST00000483062 RASA3Q14644 834 aa10.11□□□□□ -0.79
SYN3-212ENST00000483062 DUSP27Q5VZP5 1158 aa10.11□□□□□ -0.79
SYN3-212ENST00000483062 C15orf52Q6ZUT6 534 aaKnown RBP10.11□□□□□ -0.79
SYN3-212ENST00000483062 FBXW7Q969H0 707 aa10.11□□□□□ -0.79
SYN3-212ENST00000483062 TEPSINQ96N21 525 aa10.11□□□□□ -0.79
SYN3-212ENST00000483062 METTL22Q9BUU2 404 aaPredicted RBP10.11□□□□□ -0.79
SYN3-212ENST00000483062 CD209Q9NNX6 404 aa10.11□□□□□ -0.79
SYN3-212ENST00000483062 VCANP13611 3396 aa10.11□□□□□ -0.79
SYN3-212ENST00000483062 A0A1B0GUL6 1792 aa10.11□□□□□ -0.79
SYN3-212ENST00000483062 CCL15-CCL14A0A0B4J2E2 113 aa10.1□□□□□ -0.79
SYN3-212ENST00000483062 CLRN2A0PK11 232 aa10.1□□□□□ -0.79
SYN3-212ENST00000483062 MYCP01106 439 aaPredicted RBP10.1□□□□□ -0.79
SYN3-212ENST00000483062 IGKV5-2P06315 115 aa10.1□□□□□ -0.79
SYN3-212ENST00000483062 GJB1P08034 283 aa10.1□□□□□ -0.79
SYN3-212ENST00000483062 CTGFP29279 349 aa10.1□□□□□ -0.79
SYN3-212ENST00000483062 GTF2A2P52657 109 aa10.1□□□□□ -0.79
SYN3-212ENST00000483062 PRMT2P55345 433 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms