RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CHGBP05060 677 aa21.53■■□□□ 1.04
ECHDC1-214ENST00000474289 HOXB7P09629 217 aa21.53■■□□□ 1.04
ECHDC1-214ENST00000474289 STOX1Q6ZVD7 989 aa21.53■■□□□ 1.04
ECHDC1-214ENST00000474289 NCOA5Q9HCD5 579 aaKnown RBP21.53■■□□□ 1.04
ECHDC1-214ENST00000474289 ZSCAN12O43309 604 aa21.53■■□□□ 1.04
ECHDC1-214ENST00000474289 KAZALD1Q96I82 304 aa21.53■■□□□ 1.04
ECHDC1-214ENST00000474289 MRFAP1Q9Y605 127 aa21.53■■□□□ 1.04
ECHDC1-214ENST00000474289 U3KPZ7 1027 aaPredicted RBP21.53■■□□□ 1.04
ECHDC1-214ENST00000474289 FCHSD1Q86WN1 690 aa21.52■■□□□ 1.04
ECHDC1-214ENST00000474289 LINC00301Q8NCQ3 95 aa21.52■■□□□ 1.04
ECHDC1-214ENST00000474289 AMOTL2Q9Y2J4 779 aa21.52■■□□□ 1.04
ECHDC1-214ENST00000474289 PPP2R2CQ9Y2T4 447 aa21.52■■□□□ 1.04
ECHDC1-214ENST00000474289 IKBKBO14920 756 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 ACTN2P35609 894 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 UBASH3AP57075 661 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 IQUBQ8NA54 791 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 ZBTB9Q96C00 473 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 SUCLG2Q96I99 432 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 BICC1Q9H694 974 aaKnown RBP21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 LAMA4Q16363 1823 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 CEMIPQ8WUJ3 1361 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 LONRF2Q1L5Z9 754 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 TAF7LQ5H9L4 462 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 TMEM139Q8IV31 216 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 RABGGTAQ92696 567 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 NCAPD2Q15021 1401 aa21.51■■□□□ 1.03
ECHDC1-214ENST00000474289 GNG11P61952 73 aa21.5■■□□□ 1.03
ECHDC1-214ENST00000474289 SF3A1Q15459 793 aaKnown RBP21.5■■□□□ 1.03
ECHDC1-214ENST00000474289 PTPN21Q16825 1174 aa21.5■■□□□ 1.03
ECHDC1-214ENST00000474289 ISM2Q6H9L7 571 aa21.5■■□□□ 1.03
ECHDC1-214ENST00000474289 CLIC4Q9Y696 253 aa21.5■■□□□ 1.03
ECHDC1-214ENST00000474289 ZNF609O15014 1411 aa21.5■■□□□ 1.03
ECHDC1-214ENST00000474289 PLEKHG1Q9ULL1 1385 aa21.5■■□□□ 1.03
ECHDC1-214ENST00000474289 STK38Q15208 465 aa21.5■■□□□ 1.03
ECHDC1-214ENST00000474289 CARMIL3Q8ND23 1372 aa21.5■■□□□ 1.03
ECHDC1-214ENST00000474289 ARHGAP6O43182 974 aa21.49■■□□□ 1.03
ECHDC1-214ENST00000474289 ZNF202O95125 648 aa21.49■■□□□ 1.03
ECHDC1-214ENST00000474289 CFAP100Q494V2 611 aa21.49■■□□□ 1.03
ECHDC1-214ENST00000474289 DHX32Q7L7V1 743 aaKnown RBP21.49■■□□□ 1.03
ECHDC1-214ENST00000474289 VSTM4Q8IW00 320 aa21.49■■□□□ 1.03
ECHDC1-214ENST00000474289 SERPINC1P01008 464 aa21.49■■□□□ 1.03
ECHDC1-214ENST00000474289 KLHDC4Q8TBB5 520 aa21.49■■□□□ 1.03
ECHDC1-214ENST00000474289 HDAC5Q9UQL6 1122 aa21.49■■□□□ 1.03
ECHDC1-214ENST00000474289 NDUFB9Q9Y6M9 179 aa21.49■■□□□ 1.03
ECHDC1-214ENST00000474289 MAP2K7O14733 419 aa21.48■■□□□ 1.03
ECHDC1-214ENST00000474289 KCNG4Q8TDN1 519 aa21.48■■□□□ 1.03
ECHDC1-214ENST00000474289 PLEKHG2Q9H7P9 1386 aa21.48■■□□□ 1.03
ECHDC1-214ENST00000474289 CCDC151A5D8V7 595 aa21.48■■□□□ 1.03
ECHDC1-214ENST00000474289 TMEM232C9JQI7 657 aa21.48■■□□□ 1.03
ECHDC1-214ENST00000474289 CBFA2T2O43439 604 aa21.48■■□□□ 1.03
ECHDC1-214ENST00000474289 GOLGA1Q92805 767 aa21.48■■□□□ 1.03
ECHDC1-214ENST00000474289 KIFC2Q96AC6 838 aa21.48■■□□□ 1.03
ECHDC1-214ENST00000474289 DIP2AQ14689 1571 aa21.47■■□□□ 1.03
ECHDC1-214ENST00000474289 GRM8O00222 908 aa21.47■■□□□ 1.03
ECHDC1-214ENST00000474289 HMGB1P09429 215 aaKnown RBP21.47■■□□□ 1.03
ECHDC1-214ENST00000474289 TOP1P11387 765 aaKnown RBP21.47■■□□□ 1.03
ECHDC1-214ENST00000474289 KDM3BQ7LBC6 1761 aa21.47■■□□□ 1.03
ECHDC1-214ENST00000474289 TXLNAP40222 546 aa21.47■■□□□ 1.03
ECHDC1-214ENST00000474289 KSR2Q6VAB6 950 aa21.47■■□□□ 1.03
ECHDC1-214ENST00000474289 DBF4Q9UBU7 674 aaPredicted RBP21.47■■□□□ 1.03
ECHDC1-214ENST00000474289 MARF1Q9Y4F3 1742 aaKnown RBP21.47■■□□□ 1.03
ECHDC1-214ENST00000474289 SPTLC2O15270 562 aa21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 PROSER3Q2NL68 480 aa21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 CTR9Q6PD62 1173 aa21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 ABTB2Q8N961 1025 aa21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 DHX58Q96C10 678 aa21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 AGXT2Q9BYV1 514 aa21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 MED1Q15648 1581 aaPredicted RBP21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 POLR3DP05423 398 aaPredicted RBP21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 FDPSP14324 419 aaKnown RBP21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 TEFQ10587 303 aa21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 JAKMIP3Q5VZ66 844 aa21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 OTUD7BQ6GQQ9 843 aa21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 LEKR1Q6ZMV7 388 aa21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 POLR3EQ9NVU0 708 aa21.46■■□□□ 1.03
ECHDC1-214ENST00000474289 GOLGA6L9A6NEM1 432 aa21.45■■□□□ 1.02
ECHDC1-214ENST00000474289 YEATS4O95619 227 aa21.45■■□□□ 1.02
ECHDC1-214ENST00000474289 MYL5Q02045 173 aa21.45■■□□□ 1.02
ECHDC1-214ENST00000474289 MCMDC2Q4G0Z9 681 aa21.45■■□□□ 1.02
ECHDC1-214ENST00000474289 PDE11AQ9HCR9 933 aa21.45■■□□□ 1.02
ECHDC1-214ENST00000474289 VPS18Q9P253 973 aa21.45■■□□□ 1.02
ECHDC1-214ENST00000474289 PFKFB1P16118 471 aa21.45■■□□□ 1.02
ECHDC1-214ENST00000474289 PDIA3P30101 505 aaKnown RBP21.45■■□□□ 1.02
ECHDC1-214ENST00000474289 EXOSC10Q01780 885 aaKnown RBP21.45■■□□□ 1.02
ECHDC1-214ENST00000474289 YY1AP1Q9H869 796 aa21.45■■□□□ 1.02
ECHDC1-214ENST00000474289 IVLP07476 585 aa21.44■■□□□ 1.02
ECHDC1-214ENST00000474289 BRD3Q15059 726 aa21.44■■□□□ 1.02
ECHDC1-214ENST00000474289 ICE2Q659A1 982 aa21.44■■□□□ 1.02
ECHDC1-214ENST00000474289 TOGARAM2Q6ZUX3 1019 aa21.44■■□□□ 1.02
ECHDC1-214ENST00000474289 DBNLQ9UJU6 430 aaKnown RBP21.44■■□□□ 1.02
ECHDC1-214ENST00000474289 MRC1P22897 1456 aa21.44■■□□□ 1.02
ECHDC1-214ENST00000474289 ATP5JP18859 108 aa21.44■■□□□ 1.02
ECHDC1-214ENST00000474289 C14orf37Q86TY3 774 aa21.44■■□□□ 1.02
ECHDC1-214ENST00000474289 BAG1Q99933 345 aaPredicted RBP21.44■■□□□ 1.02
ECHDC1-214ENST00000474289 MROH7-TTC4A0A0A0MT08 1334 aa21.43■■□□□ 1.02
ECHDC1-214ENST00000474289 BTBD11A6QL63 1104 aa21.43■■□□□ 1.02
ECHDC1-214ENST00000474289 AXDND1Q5T1B0 1012 aaPredicted RBP21.43■■□□□ 1.02
ECHDC1-214ENST00000474289 NBPF6Q5VWK0 638 aa21.43■■□□□ 1.02
ECHDC1-214ENST00000474289 GOLGA6L1Q8N7Z2 621 aa21.43■■□□□ 1.02
ECHDC1-214ENST00000474289 NBPF4Q96M43 638 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms