RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 MEGF11A6BM72 1044 aa8.02□□□□□ -1.13
CHMP2B-202ENST00000466696 SOX1O00570 391 aaPredicted RBP8.02□□□□□ -1.13
CHMP2B-202ENST00000466696 SSTR4P31391 388 aa8.02□□□□□ -1.13
CHMP2B-202ENST00000466696 CD97P48960 835 aa8.02□□□□□ -1.13
CHMP2B-202ENST00000466696 RNF43Q68DV7 783 aa8.02□□□□□ -1.13
CHMP2B-202ENST00000466696 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.02□□□□□ -1.13
CHMP2B-202ENST00000466696 VN1R5Q7Z5H4 357 aa8.02□□□□□ -1.13
CHMP2B-202ENST00000466696 TRIM42Q8IWZ5 723 aa8.02□□□□□ -1.13
CHMP2B-202ENST00000466696 USTQ9Y2C2 406 aa8.02□□□□□ -1.13
CHMP2B-202ENST00000466696 HIF3AQ9Y2N7 669 aa8.02□□□□□ -1.13
CHMP2B-202ENST00000466696 HMX2A2RU54 273 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 CARNS1A5YM72 827 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 COBLO75128 1261 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 BMP3P12645 472 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 PREPP48147 710 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 ZNF211Q13398 564 aaPredicted RBP8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 C14orf37Q86TY3 774 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 ASAP3Q8TDY4 903 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 FAM83CQ9BQN1 747 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 DBNDD2Q9BQY9 259 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 SOX17Q9H6I2 414 aaPredicted RBP8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 ZFYVE28Q9HCC9 887 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 ANO2Q9NQ90 1003 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 CCDC87Q9NVE4 849 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 EGFL7Q9UHF1 273 aa8.01□□□□□ -1.13
CHMP2B-202ENST00000466696 PEAR1Q5VY43 1037 aaPredicted RBP8□□□□□ -1.13
CHMP2B-202ENST00000466696 HGSNATQ68CP4 663 aa8□□□□□ -1.13
CHMP2B-202ENST00000466696 BEND4Q6ZU67 534 aa8□□□□□ -1.13
CHMP2B-202ENST00000466696 ZDHHC13Q8IUH4 622 aa8□□□□□ -1.13
CHMP2B-202ENST00000466696 KCNF1Q9H3M0 494 aa8□□□□□ -1.13
CHMP2B-202ENST00000466696 GAS2O43903 313 aaKnown RBP7.99□□□□□ -1.13
CHMP2B-202ENST00000466696 TGFB1P01137 390 aa7.99□□□□□ -1.13
CHMP2B-202ENST00000466696 GRIK1P39086 918 aa7.99□□□□□ -1.13
CHMP2B-202ENST00000466696 NUTM2GQ5VZR2 741 aa7.99□□□□□ -1.13
CHMP2B-202ENST00000466696 LATS2Q9NRM7 1088 aa7.99□□□□□ -1.13
CHMP2B-202ENST00000466696 ICMTO60725 284 aa7.98□□□□□ -1.13
CHMP2B-202ENST00000466696 INTS5Q6P9B9 1019 aaKnown RBP7.98□□□□□ -1.13
CHMP2B-202ENST00000466696 USP26Q9BXU7 913 aa7.98□□□□□ -1.13
CHMP2B-202ENST00000466696 TMPRSS13Q9BYE2 586 aa7.98□□□□□ -1.13
CHMP2B-202ENST00000466696 CYP4F12Q9HCS2 524 aa7.98□□□□□ -1.13
CHMP2B-202ENST00000466696 KIAA1324LA8MWY0 1029 aaPredicted RBP7.97□□□□□ -1.13
CHMP2B-202ENST00000466696 ESRRAP11474 423 aaPredicted RBP7.97□□□□□ -1.13
CHMP2B-202ENST00000466696 C12orf50Q8NA57 414 aaPredicted RBP7.97□□□□□ -1.13
CHMP2B-202ENST00000466696 SMG8Q8ND04 991 aaKnown RBP7.97□□□□□ -1.13
CHMP2B-202ENST00000466696 SUGCTQ9HAC7 445 aa7.97□□□□□ -1.13
CHMP2B-202ENST00000466696 BRPF3Q9ULD4 1205 aa7.97□□□□□ -1.13
CHMP2B-202ENST00000466696 LOC100289279A0A1B0GTE1 492 aa7.96□□□□□ -1.14
CHMP2B-202ENST00000466696 NEFLP07196 543 aa7.96□□□□□ -1.14
CHMP2B-202ENST00000466696 GLYCTKQ8IVS8 523 aa7.96□□□□□ -1.14
CHMP2B-202ENST00000466696 H3BRB1 525 aa7.95□□□□□ -1.14
CHMP2B-202ENST00000466696 MED26O95402 600 aa7.95□□□□□ -1.14
CHMP2B-202ENST00000466696 POLR3DP05423 398 aaPredicted RBP7.95□□□□□ -1.14
CHMP2B-202ENST00000466696 MAP4P27816 1152 aaKnown RBP7.95□□□□□ -1.14
CHMP2B-202ENST00000466696 GSTM4Q03013 218 aa7.95□□□□□ -1.14
CHMP2B-202ENST00000466696 EXOSC6Q5RKV6 272 aaKnown RBP7.95□□□□□ -1.14
CHMP2B-202ENST00000466696 GALNT12Q8IXK2 581 aa7.95□□□□□ -1.14
CHMP2B-202ENST00000466696 TUT1Q9H6E5 874 aaKnown RBP7.95□□□□□ -1.14
CHMP2B-202ENST00000466696 PRR19A6NJB7 356 aa7.94□□□□□ -1.14
CHMP2B-202ENST00000466696 TIAF1O95411 115 aa7.94□□□□□ -1.14
CHMP2B-202ENST00000466696 CCNJLQ8IV13 435 aa7.94□□□□□ -1.14
CHMP2B-202ENST00000466696 GIMAP7Q8NHV1 300 aa7.94□□□□□ -1.14
CHMP2B-202ENST00000466696 SHKBP1Q8TBC3 707 aa7.94□□□□□ -1.14
CHMP2B-202ENST00000466696 A0A096LPE4 126 aa7.93□□□□□ -1.14
CHMP2B-202ENST00000466696 A0A1W2PP55 124 aa7.93□□□□□ -1.14
CHMP2B-202ENST00000466696 A0A1W2PPZ6 126 aa7.93□□□□□ -1.14
CHMP2B-202ENST00000466696 METTL12A8MUP2 240 aa7.93□□□□□ -1.14
CHMP2B-202ENST00000466696 NDUFB5O43674 189 aa7.93□□□□□ -1.14
CHMP2B-202ENST00000466696 RXRBP28702 533 aa7.93□□□□□ -1.14
CHMP2B-202ENST00000466696 PDE3BQ13370 1112 aa7.93□□□□□ -1.14
CHMP2B-202ENST00000466696 CLEC4MQ9H2X3 399 aaPredicted RBP7.93□□□□□ -1.14
CHMP2B-202ENST00000466696 LIN7BQ9HAP6 207 aa7.93□□□□□ -1.14
CHMP2B-202ENST00000466696 DLGAP3O95886 979 aa7.92□□□□□ -1.14
CHMP2B-202ENST00000466696 SERPINB4P48594 390 aa7.92□□□□□ -1.14
CHMP2B-202ENST00000466696 PCDH1Q08174 1060 aa7.92□□□□□ -1.14
CHMP2B-202ENST00000466696 SGO2Q562F6 1265 aa7.92□□□□□ -1.14
CHMP2B-202ENST00000466696 TCF12Q99081 682 aa7.92□□□□□ -1.14
CHMP2B-202ENST00000466696 KRTAP9-2Q9BYQ4 174 aa7.92□□□□□ -1.14
CHMP2B-202ENST00000466696 WDR64B1ANS9 1081 aa7.91□□□□□ -1.14
CHMP2B-202ENST00000466696 CYP11A1P05108 521 aa7.91□□□□□ -1.14
CHMP2B-202ENST00000466696 SPINK2P20155 84 aa7.91□□□□□ -1.14
CHMP2B-202ENST00000466696 USP11P51784 963 aa7.91□□□□□ -1.14
CHMP2B-202ENST00000466696 ECM1Q16610 540 aa7.91□□□□□ -1.14
CHMP2B-202ENST00000466696 HP1BP3Q5SSJ5 553 aaPredicted RBP7.91□□□□□ -1.14
CHMP2B-202ENST00000466696 MCTP1Q6DN14 999 aa7.91□□□□□ -1.14
CHMP2B-202ENST00000466696 DTX1Q86Y01 620 aa7.91□□□□□ -1.14
CHMP2B-202ENST00000466696 MFSD14AQ96MC6 490 aa7.91□□□□□ -1.14
CHMP2B-202ENST00000466696 CITED4Q96RK1 184 aa7.91□□□□□ -1.14
CHMP2B-202ENST00000466696 ZFYVE1Q9HBF4 777 aa7.91□□□□□ -1.14
CHMP2B-202ENST00000466696 FAM95CA0A1B0GW59 222 aa7.9□□□□□ -1.14
CHMP2B-202ENST00000466696 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.9□□□□□ -1.14
CHMP2B-202ENST00000466696 GRIA4P48058 902 aa7.9□□□□□ -1.14
CHMP2B-202ENST00000466696 GP2P55259 537 aaKnown RBP7.9□□□□□ -1.14
CHMP2B-202ENST00000466696 ARHGAP4P98171 946 aa7.9□□□□□ -1.14
CHMP2B-202ENST00000466696 KIAA0319Q5VV43 1072 aa7.9□□□□□ -1.14
CHMP2B-202ENST00000466696 DDX54Q8TDD1 881 aaKnown RBP7.9□□□□□ -1.14
CHMP2B-202ENST00000466696 YIPF2Q9BWQ6 316 aa7.9□□□□□ -1.14
CHMP2B-202ENST00000466696 NRSN2Q9GZP1 204 aa7.9□□□□□ -1.14
CHMP2B-202ENST00000466696 ATG3Q9NT62 314 aa7.9□□□□□ -1.14
CHMP2B-202ENST00000466696 COL17A1Q9UMD9 1497 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms