RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 PNPLA7Q6ZV29 1317 aa7.97□□□□□ -1.13
SPTA1-202ENST00000461624 TNS2Q63HR2 1409 aa7.96□□□□□ -1.13
SPTA1-202ENST00000461624 SEMA3FQ13275 785 aa7.96□□□□□ -1.14
SPTA1-202ENST00000461624 FIGNL1Q6PIW4 674 aa7.96□□□□□ -1.14
SPTA1-202ENST00000461624 HIRIP3Q9BW71 556 aaPredicted RBP7.96□□□□□ -1.14
SPTA1-202ENST00000461624 NDFIP2Q9NV92 336 aa7.96□□□□□ -1.14
SPTA1-202ENST00000461624 LOC105371045A0A1W2PR82 267 aa7.95□□□□□ -1.14
SPTA1-202ENST00000461624 A6NJR5 290 aa7.95□□□□□ -1.14
SPTA1-202ENST00000461624 STAU1O95793 577 aaKnown RBP7.95□□□□□ -1.14
SPTA1-202ENST00000461624 POLD1P28340 1107 aa7.95□□□□□ -1.14
SPTA1-202ENST00000461624 PLA2G4AP47712 749 aa7.95□□□□□ -1.14
SPTA1-202ENST00000461624 CFAP70Q5T0N1 1121 aa7.95□□□□□ -1.14
SPTA1-202ENST00000461624 NIFKQ9BYG3 293 aaKnown RBP7.95□□□□□ -1.14
SPTA1-202ENST00000461624 QRICH2Q9H0J4 1663 aa7.95□□□□□ -1.14
SPTA1-202ENST00000461624 BRD4O60885 1362 aaPredicted RBP7.95□□□□□ -1.14
SPTA1-202ENST00000461624 RGPD5Q99666 1765 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 BMP4P12644 408 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 FGFR3P22607 806 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 SMTNP53814 917 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 RGL3Q3MIN7 710 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 PLA2G4EQ3MJ16 856 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 SLCO4C1Q6ZQN7 724 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 ALYREFQ86V81 257 aaKnown RBP7.94□□□□□ -1.14
SPTA1-202ENST00000461624 NLRP8Q86W28 1048 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 ABHD17AQ96GS6 310 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 POM121Q96HA1 1249 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 WDR17Q8IZU2 1322 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 USP6P35125 1406 aa7.94□□□□□ -1.14
SPTA1-202ENST00000461624 LY75O60449 1722 aa7.93□□□□□ -1.14
SPTA1-202ENST00000461624 SHISA8B8ZZ34 492 aa7.93□□□□□ -1.14
SPTA1-202ENST00000461624 BNIP3LO60238 219 aa7.93□□□□□ -1.14
SPTA1-202ENST00000461624 TOMM70O94826 608 aa7.93□□□□□ -1.14
SPTA1-202ENST00000461624 GCP02774 474 aa7.93□□□□□ -1.14
SPTA1-202ENST00000461624 ATP4AP20648 1035 aa7.93□□□□□ -1.14
SPTA1-202ENST00000461624 HTRA3P83110 453 aa7.93□□□□□ -1.14
SPTA1-202ENST00000461624 GALNT6Q8NCL4 622 aa7.93□□□□□ -1.14
SPTA1-202ENST00000461624 CLUAP1Q96AJ1 413 aa7.93□□□□□ -1.14
SPTA1-202ENST00000461624 POGKQ9P215 609 aa7.93□□□□□ -1.14
SPTA1-202ENST00000461624 MKL2Q9ULH7 1088 aa7.93□□□□□ -1.14
SPTA1-202ENST00000461624 MSTNO14793 375 aa7.92□□□□□ -1.14
SPTA1-202ENST00000461624 MTFR1Q15390 333 aa7.92□□□□□ -1.14
SPTA1-202ENST00000461624 NBPF1Q3BBV0 1214 aa7.92□□□□□ -1.14
SPTA1-202ENST00000461624 EDARADDQ8WWZ3 215 aa7.92□□□□□ -1.14
SPTA1-202ENST00000461624 NUDT16Q96DE0 195 aaKnown RBP7.92□□□□□ -1.14
SPTA1-202ENST00000461624 SLC4A9Q96Q91 983 aa7.92□□□□□ -1.14
SPTA1-202ENST00000461624 DNAAF2Q9NVR5 837 aaKnown RBP7.92□□□□□ -1.14
SPTA1-202ENST00000461624 PCDHGC4Q9Y5F7 938 aa7.92□□□□□ -1.14
SPTA1-202ENST00000461624 PDE4DIPQ5VU43 2346 aa7.91□□□□□ -1.14
SPTA1-202ENST00000461624 LZTS3O60299 673 aaPredicted RBP7.91□□□□□ -1.14
SPTA1-202ENST00000461624 ITGAEP38570 1179 aa7.91□□□□□ -1.14
SPTA1-202ENST00000461624 ZNF295-AS1Q8N0V1 137 aa7.91□□□□□ -1.14
SPTA1-202ENST00000461624 ZMYND15Q9H091 742 aa7.91□□□□□ -1.14
SPTA1-202ENST00000461624 ZDHHC3Q9NYG2 299 aa7.91□□□□□ -1.14
SPTA1-202ENST00000461624 WWC3Q9ULE0 1092 aa7.91□□□□□ -1.14
SPTA1-202ENST00000461624 ACEP12821 1306 aa7.91□□□□□ -1.14
SPTA1-202ENST00000461624 PIK3C2AO00443 1686 aa7.91□□□□□ -1.14
SPTA1-202ENST00000461624 KAT6BQ8WYB5 2073 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 KIAA1551Q9HCM1 1747 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 CPSF1Q10570 1443 aaKnown RBP7.9□□□□□ -1.14
SPTA1-202ENST00000461624 PPIP5K1Q6PFW1 1433 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 A6NJY4 79 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 TMEM229AB2RXF0 380 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 PIK3R2O00459 728 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 CDK2AP1O14519 115 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 C2CD2LO14523 706 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 ARAFP10398 606 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 SNRPNP63162 240 aaKnown RBP7.9□□□□□ -1.14
SPTA1-202ENST00000461624 EML3Q32P44 896 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 C1orf229Q6ZS94 237 aaPredicted RBP7.9□□□□□ -1.14
SPTA1-202ENST00000461624 TOM1L2Q6ZVM7 507 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 ABTB2Q8N961 1025 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 NFATC2IPQ8NCF5 419 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 SPOCK3Q9BQ16 436 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 CARD10Q9BWT7 1032 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 ZCCHC2Q9C0B9 1178 aaKnown RBP7.9□□□□□ -1.14
SPTA1-202ENST00000461624 IQSEC3Q9UPP2 1182 aaPredicted RBP7.9□□□□□ -1.14
SPTA1-202ENST00000461624 CD2APQ9Y5K6 639 aa7.9□□□□□ -1.14
SPTA1-202ENST00000461624 USP54Q70EL1 1684 aa7.89□□□□□ -1.15
SPTA1-202ENST00000461624 ITGB2P05107 769 aa7.89□□□□□ -1.15
SPTA1-202ENST00000461624 TATP17735 454 aaPredicted RBP7.89□□□□□ -1.15
SPTA1-202ENST00000461624 CTBSQ01459 385 aa7.89□□□□□ -1.15
SPTA1-202ENST00000461624 ACSBG1Q96GR2 724 aa7.89□□□□□ -1.15
SPTA1-202ENST00000461624 GGA1Q9UJY5 639 aa7.89□□□□□ -1.15
SPTA1-202ENST00000461624 PCDHGA11Q9Y5H2 935 aa7.89□□□□□ -1.15
SPTA1-202ENST00000461624 NFAT5O94916 1531 aa7.88□□□□□ -1.15
SPTA1-202ENST00000461624 BACH1O14867 736 aa7.88□□□□□ -1.15
SPTA1-202ENST00000461624 ATXN7O15265 892 aaPredicted RBP7.88□□□□□ -1.15
SPTA1-202ENST00000461624 NLRP13Q86W25 1043 aa7.88□□□□□ -1.15
SPTA1-202ENST00000461624 AIDAQ96BJ3 306 aa7.88□□□□□ -1.15
SPTA1-202ENST00000461624 RRAGCQ9HB90 399 aa7.88□□□□□ -1.15
SPTA1-202ENST00000461624 NMRK2Q9NPI5 230 aa7.88□□□□□ -1.15
SPTA1-202ENST00000461624 AVENQ9NQS1 362 aaPredicted RBP7.88□□□□□ -1.15
SPTA1-202ENST00000461624 SERTAD1Q9UHV2 236 aa7.88□□□□□ -1.15
SPTA1-202ENST00000461624 TRAK1Q9UPV9 953 aa7.88□□□□□ -1.15
SPTA1-202ENST00000461624 NOD1Q9Y239 953 aa7.88□□□□□ -1.15
SPTA1-202ENST00000461624 C10orf71Q711Q0 1435 aa7.87□□□□□ -1.15
SPTA1-202ENST00000461624 NSD2O96028 1365 aa7.87□□□□□ -1.15
SPTA1-202ENST00000461624 CCDC7Q96M83 1385 aa7.87□□□□□ -1.15
SPTA1-202ENST00000461624 TOGARAM1Q9Y4F4 1720 aa7.87□□□□□ -1.15
SPTA1-202ENST00000461624 A0A1W2PNR3 127 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms