RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
SPTA1-202ENST00000461624 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
SPTA1-202ENST00000461624 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
SPTA1-202ENST00000461624 PHF23Q9BUL5 403 aaPredicted RBP20.77■□□□□ 0.92
SPTA1-202ENST00000461624 FOXD1Q16676 465 aa19.57■□□□□ 0.72
SPTA1-202ENST00000461624 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
SPTA1-202ENST00000461624 POTEDQ86YR6 584 aa18.38■□□□□ 0.53
SPTA1-202ENST00000461624 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
SPTA1-202ENST00000461624 MSH5O43196 834 aa18.35■□□□□ 0.53
SPTA1-202ENST00000461624 PIAS4Q8N2W9 510 aaPredicted RBP18.34■□□□□ 0.53
SPTA1-202ENST00000461624 ADRA2BP18089 450 aa18.31■□□□□ 0.52
SPTA1-202ENST00000461624 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
SPTA1-202ENST00000461624 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
SPTA1-202ENST00000461624 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
SPTA1-202ENST00000461624 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
SPTA1-202ENST00000461624 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
SPTA1-202ENST00000461624 HOXD11P31277 338 aaPredicted RBP16.17■□□□□ 0.18
SPTA1-202ENST00000461624 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
SPTA1-202ENST00000461624 NCBP3Q53F19 620 aaKnown RBP16.02■□□□□ 0.16
SPTA1-202ENST00000461624 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
SPTA1-202ENST00000461624 NPM3O75607 178 aaKnown RBP15.72■□□□□ 0.11
SPTA1-202ENST00000461624 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
SPTA1-202ENST00000461624 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
SPTA1-202ENST00000461624 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
SPTA1-202ENST00000461624 KCNA4P22459 653 aa15.51■□□□□ 0.07
SPTA1-202ENST00000461624 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
SPTA1-202ENST00000461624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.051e-10■■□□□ 12.5
SPTA1-202ENST00000461624 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
SPTA1-202ENST00000461624 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
SPTA1-202ENST00000461624 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
SPTA1-202ENST00000461624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
SPTA1-202ENST00000461624 CAPN15O75808 1086 aa14.76□□□□□ -0.05
SPTA1-202ENST00000461624 APLP2Q06481 763 aa14.76□□□□□ -0.05
SPTA1-202ENST00000461624 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
SPTA1-202ENST00000461624 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
SPTA1-202ENST00000461624 DSG3P32926 999 aa14.67□□□□□ -0.06
SPTA1-202ENST00000461624 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
SPTA1-202ENST00000461624 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
SPTA1-202ENST00000461624 MYCNP04198 464 aaPredicted RBP14.59□□□□□ -0.07
SPTA1-202ENST00000461624 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
SPTA1-202ENST00000461624 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
SPTA1-202ENST00000461624 ABCB7O75027 752 aa14.4□□□□□ -0.1
SPTA1-202ENST00000461624 ZBTB22O15209 634 aa14.24□□□□□ -0.13
SPTA1-202ENST00000461624 POLA2Q14181 598 aa14.19□□□□□ -0.14
SPTA1-202ENST00000461624 POTEHQ6S545 545 aa14.17□□□□□ -0.14
SPTA1-202ENST00000461624 ATF5Q9Y2D1 282 aaPredicted RBP14.15□□□□□ -0.14
SPTA1-202ENST00000461624 ATXN8OSP0DMR3 200 aa14.08□□□□□ -0.16
SPTA1-202ENST00000461624 NISCHQ9Y2I1 1504 aa14.07□□□□□ -0.16
SPTA1-202ENST00000461624 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
SPTA1-202ENST00000461624 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
SPTA1-202ENST00000461624 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
SPTA1-202ENST00000461624 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
SPTA1-202ENST00000461624 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.21
SPTA1-202ENST00000461624 FBLN2P98095 1184 aa13.68□□□□□ -0.22
SPTA1-202ENST00000461624 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
SPTA1-202ENST00000461624 REM2Q8IYK8 340 aaPredicted RBP13.57□□□□□ -0.24
SPTA1-202ENST00000461624 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
SPTA1-202ENST00000461624 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
SPTA1-202ENST00000461624 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
SPTA1-202ENST00000461624 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
SPTA1-202ENST00000461624 MKRN4PQ13434 485 aaPredicted RBP13.53□□□□□ -0.24
SPTA1-202ENST00000461624 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
SPTA1-202ENST00000461624 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
SPTA1-202ENST00000461624 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
SPTA1-202ENST00000461624 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
SPTA1-202ENST00000461624 ABCC9O60706 1549 aa13.33□□□□□ -0.28
SPTA1-202ENST00000461624 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
SPTA1-202ENST00000461624 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
SPTA1-202ENST00000461624 CLEC11AQ9Y240 323 aa13.19□□□□□ -0.3
SPTA1-202ENST00000461624 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
SPTA1-202ENST00000461624 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
SPTA1-202ENST00000461624 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
SPTA1-202ENST00000461624 HAX1O00165 279 aa13.05□□□□□ -0.32
SPTA1-202ENST00000461624 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
SPTA1-202ENST00000461624 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
SPTA1-202ENST00000461624 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
SPTA1-202ENST00000461624 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
SPTA1-202ENST00000461624 CCDC180Q9P1Z9 1646 aa12.9□□□□□ -0.34
SPTA1-202ENST00000461624 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
SPTA1-202ENST00000461624 EVX2Q03828 476 aa12.84□□□□□ -0.35
SPTA1-202ENST00000461624 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
SPTA1-202ENST00000461624 PROM2Q8N271 834 aa12.73□□□□□ -0.37
SPTA1-202ENST00000461624 CREBZFQ9NS37 354 aa12.72□□□□□ -0.37
SPTA1-202ENST00000461624 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
SPTA1-202ENST00000461624 GABBR2O75899 941 aa12.62□□□□□ -0.39
SPTA1-202ENST00000461624 CLCN6P51797 869 aa12.58□□□□□ -0.4
SPTA1-202ENST00000461624 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPTA1-202ENST00000461624 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
SPTA1-202ENST00000461624 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
SPTA1-202ENST00000461624 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
SPTA1-202ENST00000461624 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
SPTA1-202ENST00000461624 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
SPTA1-202ENST00000461624 FKBP8Q14318 412 aa12.43□□□□□ -0.42
SPTA1-202ENST00000461624 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
SPTA1-202ENST00000461624 MIER1Q8N108 512 aa12.35□□□□□ -0.43
SPTA1-202ENST00000461624 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
SPTA1-202ENST00000461624 DNAJC5Q9H3Z4 198 aa12.33□□□□□ -0.44
SPTA1-202ENST00000461624 DCBLD2Q96PD2 775 aa12.32□□□□□ -0.44
SPTA1-202ENST00000461624 PHF12Q96QT6 1004 aa12.31□□□□□ -0.44
SPTA1-202ENST00000461624 GALR2O43603 387 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms