RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 HAUS3Q68CZ6 603 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 CTR9Q6PD62 1173 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 PAXIP1Q6ZW49 1069 aaPredicted RBP9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 C16orf71Q8IYS4 520 aaPredicted RBP9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 WDR66Q8TBY9 1149 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 DDX21Q9NR30 783 aaKnown RBP eCLIP9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 CCDC65Q8IXS2 484 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 IQUBQ8NA54 791 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 UBASH3AP57075 661 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 TBC1D22AQ8WUA7 517 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 CCDC113Q9H0I3 377 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 DCTPP1Q9H773 170 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 ATP7AQ04656 1500 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 GAS8O95995 478 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 SLC8A3P57103 927 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 SLC9C2Q5TAH2 1124 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 DHX32Q7L7V1 743 aaKnown RBP9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 KIFAP3Q92845 792 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 ALDH3A1P30838 453 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 NT5C2P49902 561 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 ARFGAP2Q8N6H7 521 aa9.56□□□□□ -0.88
MCF2L2-205ENST00000461074 DYNC1I1O14576 645 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 RILPL1Q5EBL4 403 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 PLBD2Q8NHP8 589 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 EIF4A2Q14240 407 aaKnown RBP9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 LMBR1LQ6UX01 489 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 HEATR3Q7Z4Q2 680 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 PPP1R14CQ8TAE6 165 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 IVLP07476 585 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 BRF1Q92994 677 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 CTAGE15A4D2H0 777 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 CTAGE8P0CG41 777 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 DTHD1Q6ZMT9 781 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 CTAGE6Q86UF2 777 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 CTAGE4Q8IX94 777 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 TMX3Q96JJ7 454 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 ZMYM3Q14202 1370 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 SPTLC2O15270 562 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 SLU7O95391 586 aaKnown RBP9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 SDSP20132 328 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 ASIC1P78348 528 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 KIF5AQ12840 1032 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 CNGA4Q8IV77 575 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 MTUS1Q9ULD2 1270 aa9.55□□□□□ -0.88
MCF2L2-205ENST00000461074 MACROD2A1Z1Q3 448 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 IRS4O14654 1257 aaPredicted RBP9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 SSFA2P28290 1259 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 ATP5DP30049 168 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 SMTNP53814 917 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 TRAPPC3LQ5T215 181 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 STK32BQ9NY57 414 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 ERBB4Q15303 1308 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 PARP1P09874 1014 aaKnown RBP9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 PUM3Q15397 648 aaKnown RBP9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 JADE2Q9NQC1 790 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 PBRM1Q86U86 1689 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 CNGA1P29973 690 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 NEK11Q8NG66 645 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 CEP63Q96MT8 703 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 IBTKQ9P2D0 1353 aaPredicted RBP9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 ADCY5O95622 1261 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 GIMAP7Q8NHV1 300 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 COL17A1Q9UMD9 1497 aaPredicted RBP9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 STX10O60499 249 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 F13A1P00488 732 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 HOXA7P31268 230 aaPredicted RBP9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 MTRF1LQ9UGC7 380 aaKnown RBP9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 PUF60Q9UHX1 559 aaKnown RBP9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 CTAGE9A4FU28 777 aa9.54□□□□□ -0.88
MCF2L2-205ENST00000461074 VAT1LQ9HCJ6 419 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 RNMTO43148 476 aaKnown RBP9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 GUCY1B3Q02153 619 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 ANKS4BQ8N8V4 417 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 FRMD4BQ9Y2L6 1034 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 ELP1O95163 1332 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 ABCA5Q8WWZ7 1642 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 MROH5Q6ZUA9 1318 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 CEP135Q66GS9 1140 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 SH3TC1Q8TE82 1336 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 DEXIO95424 95 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 KCNA6P17658 529 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 CNNM4Q6P4Q7 775 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 TNNC1P63316 161 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 MAP3K9P80192 1104 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 Q6ZUG5 572 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 NUP58Q9BVL2 599 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 PICK1Q9NRD5 415 aa9.53□□□□□ -0.88
MCF2L2-205ENST00000461074 CNBD1Q8NA66 436 aa9.52□□□□□ -0.88
MCF2L2-205ENST00000461074 RAB3IL1Q8TBN0 382 aa9.52□□□□□ -0.88
MCF2L2-205ENST00000461074 PDE8AO60658 829 aa9.52□□□□□ -0.89
MCF2L2-205ENST00000461074 IWS1Q96ST2 819 aa9.52□□□□□ -0.89
MCF2L2-205ENST00000461074 NUCKS1Q9H1E3 243 aaKnown RBP9.52□□□□□ -0.89
MCF2L2-205ENST00000461074 A0A1W2PRG0 241 aa9.52□□□□□ -0.89
MCF2L2-205ENST00000461074 GNG11P61952 73 aa9.52□□□□□ -0.89
MCF2L2-205ENST00000461074 PRPF4BQ13523 1007 aaKnown RBP9.52□□□□□ -0.89
MCF2L2-205ENST00000461074 HACE1Q8IYU2 909 aa9.52□□□□□ -0.89
MCF2L2-205ENST00000461074 NOX5Q96PH1 765 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms